Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is gspE [C]

Identifier: 21226515

GI number: 21226515

Start: 525477

End: 527324

Strand: Reverse

Name: gspE [C]

Synonym: MM_0413

Alternate gene names: 21226515

Gene position: 527324-525477 (Counterclockwise)

Preceding gene: 21226516

Following gene: 21226514

Centisome position: 12.87

GC content: 44.05

Gene sequence:

>1848_bases
ATGGAAGCTCTGCCTTTTAACCCGTTGCCTGCACCGGAGAATGGGGGGCGTTCCAGAAAAGAGGTATATGCAATCCTTTC
TCCGGAAATGCAGGAGTTCGTTGGCAGGGAAGAAAATCACCATATCCTTGATTATATCTGCAGGCTTCCAGCGGAAGAAA
TAGGATTTCCGGAGTTCTACCCGAGAATTTCCAGGTCCATGAAAAGCATTAAACGCCCCAATCTGATTTATCCTGCCGGA
AAAGGGCTTGCTGTTCATATATATCCGGATAAGGAAGACGTAAGGAATTACTACATTCCCATAGAGCCCTGCCTGTTCCA
AAAACTGGACAGCATGCTTGAGGAAGTGGAAAAATTACTCATTGACGTGATACATGACCAGGAAATTAATACAAATGACC
CTGAGGAAAAAAAGAAACTTCTCGTAAAGGCTCTTGAAAAGACCTGTGATGTAAAAGAGAATTTGAAGGAAAAACCCGGA
AAATCAGAAGAAAAAGGCGGACAAAATCAAAAAGATACAGATCAGAAAAAAAATAAGGAAAAAGATTCCCTGAAAGAAGG
AAAGAATGACGGAAAAACCGGATTTATCGGAAACCTTAAGGGAGCCGGTAAATTATTCGGTTCAGGAAAACCGAAGAAAA
TTTCCGTAACTCCTCAGGAATTCAATGCAATCAAATATCGGATGGTCAGGGATAAGGTGGGGATGGGAGTGCTCGAACCT
TTACTGCTTGACTCAAACATAGAAGATATAAGCTGCAGCGGTCTTGGAAGGATCTTTGTTGAGCATAAGGTATTTTCGTC
CCTTAAAACAACAATCTCGTTTGAGGAAATTGAAGAACTCAATTCTTTTGTCATACAGATGTCCGAAAAAGTAGGAAAGC
CGATCACCTACAGGGACCCTATAGTAGATACGGCTCTTCCGGACGGGTCAAGGATTAATATCGTATTCGGAGAAGATGTA
TCAAAACGTGGGAGCAATTTTACAATCAGGAAATTCATGGGAGTCCCAATTTCAATCCTCGAACTTGTAGAGTTCGGTAC
AATTGACTATACAATGGCTGCATACATGTGGATGATGCTCAGGGCAGGGATGAACTGTTTTGTTTCGGGAGAAACAGCTT
CCGGGAAGACCACAATGATGAACGCTGTGACCACTTTCCTTCCTCCGGATTCAAAAATAGTCTCTATAGAAGACACACCG
GAATTGCAGGTTCCCCACAAGAACTGGACCCGTGAGGTTACAAGGACTACGAGGGACGACAGCGGGTCTGATGTTTCCAT
GTTTGACCTCCTTAAGGCAGCCCTGCGACAGCGCCCGAATGAGATTATGATAGGAGAGATCCGTGGGGTTGAGGGAAGTA
TCGCTTTTCAGGCGATGCAAACAGGGCACCCGGTAATGTCAACGTTCCATGCAGCATCGGTTGAAAAACTGATCCAGAGG
CTTACCGGAGACCCCATAAATGTGCCCAAAAATTATGTGGATAACCTGAATGTGGTCATTATCCAGAGTGCTGTAAACGT
CCCCGGGAAAGGGCTTGGAAGAAGGGTACTGAGCATAAACGAGATAGTTGGCTATGATGCTGTGAACCAGGCTTTTAATT
TTATGGATATTTTCAAATGGGACCCTGCGACAGATACGTTCAAATTCACGGGAAAAAACAACTCCTACCTTCTGGAACAT
AAAATTGCCCCGCGAATGGGAATTCCCGAAACCCAGGTCAGGAAGATATACTCTGAGCTTGACAGGAGATCAAAAATCCT
GAGAAAAATCCACCAGGCAAATATTACGAATTTCTATGACCTGTTTACTACCCTGATCCAGCTTGAGGAAGCGGGGGTAA
TATCATGA

Upstream 100 bases:

>100_bases
GCTGAAAATAATTCCTGTTTCAAAGATTAAAGCCTGAAAAAATGAAAAAAGCGTCCGGAGAGATGGTTCCCGGAAAGAAA
AACCCGAATGAGGAATCTAG

Downstream 100 bases:

>100_bases
ATTATGCAGAGATGGCTCCGTACTTAAAAATAAATTCTGCGAAGCGGGGAGTTGAAGGGTATTTCAGTCTTGCCCGAAAA
CTGAAGAGCACAAAAGTCGT

Product: flagella-like protein FlaI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MEALPFNPLPAPENGGRSRKEVYAILSPEMQEFVGREENHHILDYICRLPAEEIGFPEFYPRISRSMKSIKRPNLIYPAG
KGLAVHIYPDKEDVRNYYIPIEPCLFQKLDSMLEEVEKLLIDVIHDQEINTNDPEEKKKLLVKALEKTCDVKENLKEKPG
KSEEKGGQNQKDTDQKKNKEKDSLKEGKNDGKTGFIGNLKGAGKLFGSGKPKKISVTPQEFNAIKYRMVRDKVGMGVLEP
LLLDSNIEDISCSGLGRIFVEHKVFSSLKTTISFEEIEELNSFVIQMSEKVGKPITYRDPIVDTALPDGSRINIVFGEDV
SKRGSNFTIRKFMGVPISILELVEFGTIDYTMAAYMWMMLRAGMNCFVSGETASGKTTMMNAVTTFLPPDSKIVSIEDTP
ELQVPHKNWTREVTRTTRDDSGSDVSMFDLLKAALRQRPNEIMIGEIRGVEGSIAFQAMQTGHPVMSTFHAASVEKLIQR
LTGDPINVPKNYVDNLNVVIIQSAVNVPGKGLGRRVLSINEIVGYDAVNQAFNFMDIFKWDPATDTFKFTGKNNSYLLEH
KIAPRMGIPETQVRKIYSELDRRSKILRKIHQANITNFYDLFTTLIQLEEAGVIS

Sequences:

>Translated_615_residues
MEALPFNPLPAPENGGRSRKEVYAILSPEMQEFVGREENHHILDYICRLPAEEIGFPEFYPRISRSMKSIKRPNLIYPAG
KGLAVHIYPDKEDVRNYYIPIEPCLFQKLDSMLEEVEKLLIDVIHDQEINTNDPEEKKKLLVKALEKTCDVKENLKEKPG
KSEEKGGQNQKDTDQKKNKEKDSLKEGKNDGKTGFIGNLKGAGKLFGSGKPKKISVTPQEFNAIKYRMVRDKVGMGVLEP
LLLDSNIEDISCSGLGRIFVEHKVFSSLKTTISFEEIEELNSFVIQMSEKVGKPITYRDPIVDTALPDGSRINIVFGEDV
SKRGSNFTIRKFMGVPISILELVEFGTIDYTMAAYMWMMLRAGMNCFVSGETASGKTTMMNAVTTFLPPDSKIVSIEDTP
ELQVPHKNWTREVTRTTRDDSGSDVSMFDLLKAALRQRPNEIMIGEIRGVEGSIAFQAMQTGHPVMSTFHAASVEKLIQR
LTGDPINVPKNYVDNLNVVIIQSAVNVPGKGLGRRVLSINEIVGYDAVNQAFNFMDIFKWDPATDTFKFTGKNNSYLLEH
KIAPRMGIPETQVRKIYSELDRRSKILRKIHQANITNFYDLFTTLIQLEEAGVIS
>Mature_615_residues
MEALPFNPLPAPENGGRSRKEVYAILSPEMQEFVGREENHHILDYICRLPAEEIGFPEFYPRISRSMKSIKRPNLIYPAG
KGLAVHIYPDKEDVRNYYIPIEPCLFQKLDSMLEEVEKLLIDVIHDQEINTNDPEEKKKLLVKALEKTCDVKENLKEKPG
KSEEKGGQNQKDTDQKKNKEKDSLKEGKNDGKTGFIGNLKGAGKLFGSGKPKKISVTPQEFNAIKYRMVRDKVGMGVLEP
LLLDSNIEDISCSGLGRIFVEHKVFSSLKTTISFEEIEELNSFVIQMSEKVGKPITYRDPIVDTALPDGSRINIVFGEDV
SKRGSNFTIRKFMGVPISILELVEFGTIDYTMAAYMWMMLRAGMNCFVSGETASGKTTMMNAVTTFLPPDSKIVSIEDTP
ELQVPHKNWTREVTRTTRDDSGSDVSMFDLLKAALRQRPNEIMIGEIRGVEGSIAFQAMQTGHPVMSTFHAASVEKLIQR
LTGDPINVPKNYVDNLNVVIIQSAVNVPGKGLGRRVLSINEIVGYDAVNQAFNFMDIFKWDPATDTFKFTGKNNSYLLEH
KIAPRMGIPETQVRKIYSELDRRSKILRKIHQANITNFYDLFTTLIQLEEAGVIS

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=117, Percent_Identity=38.4615384615385, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786296, Length=117, Percent_Identity=39.3162393162393, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 69316; Mature: 69316

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALPFNPLPAPENGGRSRKEVYAILSPEMQEFVGREENHHILDYICRLPAEEIGFPEFY
CCCCCCCCCCCCCCCCCCHHHEEEHCCHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCHHH
PRISRSMKSIKRPNLIYPAGKGLAVHIYPDKEDVRNYYIPIEPCLFQKLDSMLEEVEKLL
HHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHCCEECCCCHHHHHHHHHHHHHHHHHH
IDVIHDQEINTNDPEEKKKLLVKALEKTCDVKENLKEKPGKSEEKGGQNQKDTDQKKNKE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCCCCCHHHHCCH
KDSLKEGKNDGKTGFIGNLKGAGKLFGSGKPKKISVTPQEFNAIKYRMVRDKVGMGVLEP
HHHHHCCCCCCCCCEEECCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHHCCHHHHH
LLLDSNIEDISCSGLGRIFVEHKVFSSLKTTISFEEIEELNSFVIQMSEKVGKPITYRDP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
IVDTALPDGSRINIVFGEDVSKRGSNFTIRKFMGVPISILELVEFGTIDYTMAAYMWMML
CHHCCCCCCCEEEEEECCCHHCCCCCEEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
RAGMNCFVSGETASGKTTMMNAVTTFLPPDSKIVSIEDTPELQVPHKNWTREVTRTTRDD
HCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCC
SGSDVSMFDLLKAALRQRPNEIMIGEIRGVEGSIAFQAMQTGHPVMSTFHAASVEKLIQR
CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LTGDPINVPKNYVDNLNVVIIQSAVNVPGKGLGRRVLSINEIVGYDAVNQAFNFMDIFKW
HCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEC
DPATDTFKFTGKNNSYLLEHKIAPRMGIPETQVRKIYSELDRRSKILRKIHQANITNFYD
CCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LFTTLIQLEEAGVIS
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MEALPFNPLPAPENGGRSRKEVYAILSPEMQEFVGREENHHILDYICRLPAEEIGFPEFY
CCCCCCCCCCCCCCCCCCHHHEEEHCCHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCHHH
PRISRSMKSIKRPNLIYPAGKGLAVHIYPDKEDVRNYYIPIEPCLFQKLDSMLEEVEKLL
HHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHCCEECCCCHHHHHHHHHHHHHHHHHH
IDVIHDQEINTNDPEEKKKLLVKALEKTCDVKENLKEKPGKSEEKGGQNQKDTDQKKNKE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCCCCCHHHHCCH
KDSLKEGKNDGKTGFIGNLKGAGKLFGSGKPKKISVTPQEFNAIKYRMVRDKVGMGVLEP
HHHHHCCCCCCCCCEEECCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHHCCHHHHH
LLLDSNIEDISCSGLGRIFVEHKVFSSLKTTISFEEIEELNSFVIQMSEKVGKPITYRDP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
IVDTALPDGSRINIVFGEDVSKRGSNFTIRKFMGVPISILELVEFGTIDYTMAAYMWMML
CHHCCCCCCCEEEEEECCCHHCCCCCEEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
RAGMNCFVSGETASGKTTMMNAVTTFLPPDSKIVSIEDTPELQVPHKNWTREVTRTTRDD
HCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCC
SGSDVSMFDLLKAALRQRPNEIMIGEIRGVEGSIAFQAMQTGHPVMSTFHAASVEKLIQR
CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LTGDPINVPKNYVDNLNVVIIQSAVNVPGKGLGRRVLSINEIVGYDAVNQAFNFMDIFKW
HCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEC
DPATDTFKFTGKNNSYLLEHKIAPRMGIPETQVRKIYSELDRRSKILRKIHQANITNFYD
CCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LFTTLIQLEEAGVIS
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]