| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226473
Identifier: 21226473
GI number: 21226473
Start: 475505
End: 476392
Strand: Direct
Name: 21226473
Synonym: MM_0371
Alternate gene names: NA
Gene position: 475505-476392 (Clockwise)
Preceding gene: 21226472
Following gene: 21226474
Centisome position: 11.61
GC content: 38.63
Gene sequence:
>888_bases TTGGATCTTGAAATATCAATAAAAAAGTATGAATCTGCAGTTCGGGTTTACAGGCTATTATACACTCTGTTTGATTTCGT CACAGCGTTCCTTACTTTGTATATAATCTTTTCATTAACTAATATGGAAGATATATTTTCGATATTTAGTGTTTTTGAAC CTTATACTGGGATTAAATATGATATTCTAGGGTTTAAGGTTGTGTTTGAAACTTTAGGTATTATACTTGTAGAACTAATT ATTGCTCTAATAATTACTGCCATTAGATACAAGCGGAAAGAAAAAAAAGATGCCATAAAACTTATCGAGGAAAATTTCCC AACACTTAAGGAAAGATTAAGGACAGCATACGATAACAGGGATAAAGAAAACATAATTGTTAAGGATCTTCTCGGTGGGG TAATTATTGATCTAAAGCCAATAAAACCCTCATCCCTCTTGAATAAGAGATTGGTAATAATAGGGCTTGGAGCGATGTTG CTTACAGGCTCTGGTTCTACATATATAGCGGTTACAGACTATCATACAGATATAACTCCTACCGACTTCAGTGAAGTGAT TGAAAATCTTCCTTTCTCTGGATCGAATTCGGACATTGTTTCTGTGGAGGAAAACGGCGGGACCTCCTCGGACCCGCAGG ACAACAGTGAACTTTTTGGAGAGCCGGCTGTTATCGTGGTCGAGGGCAAGGATGTAGACCTGAAGATCCCTCCTGGTGCA GGTCAGGGCTTCACTAGCCAGGAGGAAGGAGAACAGAATAACGAATCATTCATCCAGTCGGATATCTATAACCCTGAAGC CATCGCTTCTCAGTCTTATTATGAGAACCTTCCCGAAGGGTACAGAAGTGTTATCCAGAGTTATTTTGAACAACTAGCAG AAGAATGA
Upstream 100 bases:
>100_bases AAGGTACTGGGTTCCTATCCAGCTTTCAAGAAGTGAACGGAAAGATTAAAAATGGTTAAATACCTTAAAAAACTTAGTAA AGTTTGCGCGATGTGATGAT
Downstream 100 bases:
>100_bases TATAAAAATCGTCCCAAGCTGGTTATAATTGAATCCGGACTTGGTTGAAGTTGAACTTAACTGAAGACAGACTTACCCCT CAATTTAATCGAAAATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MDLEISIKKYESAVRVYRLLYTLFDFVTAFLTLYIIFSLTNMEDIFSIFSVFEPYTGIKYDILGFKVVFETLGIILVELI IALIITAIRYKRKEKKDAIKLIEENFPTLKERLRTAYDNRDKENIIVKDLLGGVIIDLKPIKPSSLLNKRLVIIGLGAML LTGSGSTYIAVTDYHTDITPTDFSEVIENLPFSGSNSDIVSVEENGGTSSDPQDNSELFGEPAVIVVEGKDVDLKIPPGA GQGFTSQEEGEQNNESFIQSDIYNPEAIASQSYYENLPEGYRSVIQSYFEQLAEE
Sequences:
>Translated_295_residues MDLEISIKKYESAVRVYRLLYTLFDFVTAFLTLYIIFSLTNMEDIFSIFSVFEPYTGIKYDILGFKVVFETLGIILVELI IALIITAIRYKRKEKKDAIKLIEENFPTLKERLRTAYDNRDKENIIVKDLLGGVIIDLKPIKPSSLLNKRLVIIGLGAML LTGSGSTYIAVTDYHTDITPTDFSEVIENLPFSGSNSDIVSVEENGGTSSDPQDNSELFGEPAVIVVEGKDVDLKIPPGA GQGFTSQEEGEQNNESFIQSDIYNPEAIASQSYYENLPEGYRSVIQSYFEQLAEE >Mature_295_residues MDLEISIKKYESAVRVYRLLYTLFDFVTAFLTLYIIFSLTNMEDIFSIFSVFEPYTGIKYDILGFKVVFETLGIILVELI IALIITAIRYKRKEKKDAIKLIEENFPTLKERLRTAYDNRDKENIIVKDLLGGVIIDLKPIKPSSLLNKRLVIIGLGAML LTGSGSTYIAVTDYHTDITPTDFSEVIENLPFSGSNSDIVSVEENGGTSSDPQDNSELFGEPAVIVVEGKDVDLKIPPGA GQGFTSQEEGEQNNESFIQSDIYNPEAIASQSYYENLPEGYRSVIQSYFEQLAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33126; Mature: 33126
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEISIKKYESAVRVYRLLYTLFDFVTAFLTLYIIFSLTNMEDIFSIFSVFEPYTGIKY CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE DILGFKVVFETLGIILVELIIALIITAIRYKRKEKKDAIKLIEENFPTLKERLRTAYDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC DKENIIVKDLLGGVIIDLKPIKPSSLLNKRLVIIGLGAMLLTGSGSTYIAVTDYHTDITP CCCHHHHHHHHCCEEEEEECCCCHHHHHCCEEEEEHHHHHEECCCCEEEEEEECCCCCCC TDFSEVIENLPFSGSNSDIVSVEENGGTSSDPQDNSELFGEPAVIVVEGKDVDLKIPPGA CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCC GQGFTSQEEGEQNNESFIQSDIYNPEAIASQSYYENLPEGYRSVIQSYFEQLAEE CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLEISIKKYESAVRVYRLLYTLFDFVTAFLTLYIIFSLTNMEDIFSIFSVFEPYTGIKY CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE DILGFKVVFETLGIILVELIIALIITAIRYKRKEKKDAIKLIEENFPTLKERLRTAYDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC DKENIIVKDLLGGVIIDLKPIKPSSLLNKRLVIIGLGAMLLTGSGSTYIAVTDYHTDITP CCCHHHHHHHHCCEEEEEECCCCHHHHHCCEEEEEHHHHHEECCCCEEEEEEECCCCCCC TDFSEVIENLPFSGSNSDIVSVEENGGTSSDPQDNSELFGEPAVIVVEGKDVDLKIPPGA CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCC GQGFTSQEEGEQNNESFIQSDIYNPEAIASQSYYENLPEGYRSVIQSYFEQLAEE CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA