| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yeaC [H]
Identifier: 21226474
GI number: 21226474
Start: 476651
End: 477625
Strand: Direct
Name: yeaC [H]
Synonym: MM_0372
Alternate gene names: 21226474
Gene position: 476651-477625 (Clockwise)
Preceding gene: 21226473
Following gene: 21226475
Centisome position: 11.64
GC content: 46.77
Gene sequence:
>975_bases ATGAATGAGATTAATACCGATTCGGGGCAGGCCGCTACGACCTACCAGAACGCAGGCAGGATTTTTAAAAGTTTTTTTGA AGAGATAGGAAATGTAATAGTGGGTCAGAACAGGGTTGTGGAAGAGATCATAATCTCCATCCTCTGTGAAGGGCATGCCC TGGTAGAAAGCAACCCGGGGCTTGGAAAAACCCTGATGATTTCCACTATCTCAAAAGCAATGAACCTGAAATTCAGCAGG ATCCAGTGTACCCCTGACCTGATGCCTTCTGACATTACAGGTACCAACATGATTCAGGAGACAGATAATAAAAAGGAGTT CAGGTTTGAACCCGGGCCTGTCTTTGCAAATATCGTGCTTGCAGACGAGATTAACCGTGCTTCTCCCAAAACTCAGTCCG CCCTTCTTGAAGCCATGCAGGAAAAACAGGTAACTGTCGGAAACGATACATTCCTGCTTGACCGCCCCTTCTTTATCCTT GCTACCCAGAACCCCATAGAAATGGAGGGGACCTATCCCCTTCCCGAAGCCCAGTTAGACCGTTTCCTCTTGAAGATCCT TGTAGACTATCCATCCTTTGAAGAAGAAATGGAGATCATAAACCGATATACGAAGTCCGAAACCCCGAAGATCACCAAGG GGCTGGACAAATCCACACTTCTCGATTTGCAAAAACTTACCCGTCAGGTCCCCATTTCAGAAGAACTCAAGCAGCGCGTC CTTTCTATTGTGTCAATGACCCGCAAAGATAAGGAACACATTGAGTACGGGGCTTCTCCGCGTGCATCCATTGGACTCAT TCTTGCAGCAAAGGCAAGAGCCCTTATACAGGGCAGGAACTTCGTGAGCAAAGAGGATATTGACTACATGGCTTACCCTG TCCTCCGCCACAGGCTGATCCTGACTTTTGAAGCAGAAAGAAGCGGGATGACACCTGATCAGGCTATCGAAGAAATTATT AAGAAGGTTAAATAA
Upstream 100 bases:
>100_bases TCAGACTGTTTTTGAAAGTATTTTGTTACGTTAACGGATAAGGTTCAGCAGGAGCGGGCTCGGGTCCCGCAAAAACAGCA ACTCTAAGGGTGAAGCAGAC
Downstream 100 bases:
>100_bases AACAGGCAAAGAAATTAGATGAATGGAATTTTCCGGGATATCGGAGTCTGAAAGGACTGTAATTGAGCAGGTTCTTAAAA TACAACCGTACAGGATGCAG
Product: MoxR-like ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNEINTDSGQAATTYQNAGRIFKSFFEEIGNVIVGQNRVVEEIIISILCEGHALVESNPGLGKTLMISTISKAMNLKFSR IQCTPDLMPSDITGTNMIQETDNKKEFRFEPGPVFANIVLADEINRASPKTQSALLEAMQEKQVTVGNDTFLLDRPFFIL ATQNPIEMEGTYPLPEAQLDRFLLKILVDYPSFEEEMEIINRYTKSETPKITKGLDKSTLLDLQKLTRQVPISEELKQRV LSIVSMTRKDKEHIEYGASPRASIGLILAAKARALIQGRNFVSKEDIDYMAYPVLRHRLILTFEAERSGMTPDQAIEEII KKVK
Sequences:
>Translated_324_residues MNEINTDSGQAATTYQNAGRIFKSFFEEIGNVIVGQNRVVEEIIISILCEGHALVESNPGLGKTLMISTISKAMNLKFSR IQCTPDLMPSDITGTNMIQETDNKKEFRFEPGPVFANIVLADEINRASPKTQSALLEAMQEKQVTVGNDTFLLDRPFFIL ATQNPIEMEGTYPLPEAQLDRFLLKILVDYPSFEEEMEIINRYTKSETPKITKGLDKSTLLDLQKLTRQVPISEELKQRV LSIVSMTRKDKEHIEYGASPRASIGLILAAKARALIQGRNFVSKEDIDYMAYPVLRHRLILTFEAERSGMTPDQAIEEII KKVK >Mature_324_residues MNEINTDSGQAATTYQNAGRIFKSFFEEIGNVIVGQNRVVEEIIISILCEGHALVESNPGLGKTLMISTISKAMNLKFSR IQCTPDLMPSDITGTNMIQETDNKKEFRFEPGPVFANIVLADEINRASPKTQSALLEAMQEKQVTVGNDTFLLDRPFFIL ATQNPIEMEGTYPLPEAQLDRFLLKILVDYPSFEEEMEIINRYTKSETPKITKGLDKSTLLDLQKLTRQVPISEELKQRV LSIVSMTRKDKEHIEYGASPRASIGLILAAKARALIQGRNFVSKEDIDYMAYPVLRHRLILTFEAERSGMTPDQAIEEII KKVK
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36518; Mature: 36518
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEINTDSGQAATTYQNAGRIFKSFFEEIGNVIVGQNRVVEEIIISILCEGHALVESNPG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCEEEECCCC LGKTLMISTISKAMNLKFSRIQCTPDLMPSDITGTNMIQETDNKKEFRFEPGPVFANIVL CCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCEEEEEEE ADEINRASPKTQSALLEAMQEKQVTVGNDTFLLDRPFFILATQNPIEMEGTYPLPEAQLD ECCCCCCCCHHHHHHHHHHHHCCEEECCCEEEEECCEEEEEECCCCEECCCCCCCHHHHH RFLLKILVDYPSFEEEMEIINRYTKSETPKITKGLDKSTLLDLQKLTRQVPISEELKQRV HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LSIVSMTRKDKEHIEYGASPRASIGLILAAKARALIQGRNFVSKEDIDYMAYPVLRHRLI HHHHHHHHCCHHHHHCCCCCCCCEEHEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEE LTFEAERSGMTPDQAIEEIIKKVK EEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNEINTDSGQAATTYQNAGRIFKSFFEEIGNVIVGQNRVVEEIIISILCEGHALVESNPG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCEEEECCCC LGKTLMISTISKAMNLKFSRIQCTPDLMPSDITGTNMIQETDNKKEFRFEPGPVFANIVL CCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCEEEEEEE ADEINRASPKTQSALLEAMQEKQVTVGNDTFLLDRPFFILATQNPIEMEGTYPLPEAQLD ECCCCCCCCHHHHHHHHHHHHCCEEECCCEEEEECCEEEEEECCCCEECCCCCCCHHHHH RFLLKILVDYPSFEEEMEIINRYTKSETPKITKGLDKSTLLDLQKLTRQVPISEELKQRV HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LSIVSMTRKDKEHIEYGASPRASIGLILAAKARALIQGRNFVSKEDIDYMAYPVLRHRLI HHHHHHHHCCHHHHHCCCCCCCCEEHEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEE LTFEAERSGMTPDQAIEEIIKKVK EEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]