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The map label for this gene is cheD

Identifier: 21226428

GI number: 21226428

Start: 431471

End: 432136

Strand: Reverse

Name: cheD

Synonym: MM_0326

Alternate gene names: 21226428

Gene position: 432136-431471 (Counterclockwise)

Preceding gene: 21226429

Following gene: 21226427

Centisome position: 10.55

GC content: 45.65

Gene sequence:

>666_bases
ATGAGCAGCGTCTTCCTGTTCATTTCGAATGAAAGCGGAAAAGCGATTTTCCTGATCAGCGGGGACGTACTGGTAAAGTC
CTTCTGCTCACTTTCGGATACATGCCCATTTCAGGATTCCTGCCGGTCGTGTTCCCTGCTTAATGCTGCAAAAAATTATC
TTGCAGGCACTGCGCCAGACTCAAGAATTAAAACCCTGGACGGGGAACTGTCCGCCGGCATAGGGGAATATAAAATCGGA
AAAAACGTGCTTTTAAAAGTCATGGGCCTCGGCTCATGCATCGGCGTTATTCTTTCCGATGTTTCTACTGGGATATGCGG
GATAGCACATGTACTGCTTCCGGGAGCTTCGGATAGAGGCGAGACCAAGTATGCTGAAACAGCGATAGAAAAAATGGTTG
AAGATATGGTTAAAATGGGGGCAAGAAGGAGCAGGATTACTGCAAAATTTGCAGGCGGGGCTCAAGTTTTCAAGCACATG
AGCCTTGATATTCTCAAAATAGGCGACAGGAACGCAATCTCTGTTGAAGAAACTCTTATAAAAAAGAATATCCCGATTCT
GGCAAAAGATGTCGGAGGGGAAGTTGGCAGGAACGTTATTTTTAATCCTGCGGACGGGAGCATGATTGTTAAATATACTG
CTAAAGGGGAAGTACTGTGGTTGTAA

Upstream 100 bases:

>100_bases
TTGAGACCTCTTTAAGCTCTGATTCGGATATAGAGATTTATCTGGCCCTGCTCCCTGAACCCTGCCTGCTTGATGATATG
ATGAAGATAATGGGACGATT

Downstream 100 bases:

>100_bases
ATATTGATGACGACTTCAATTTTCTTGTGCGAAAGATTTCAAAATCTTCCGGTATTGTCCTGACCGGGTACAGGGACAGT
TATCTCAGAAGAAGAATTGA

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSSVFLFISNESGKAIFLISGDVLVKSFCSLSDTCPFQDSCRSCSLLNAAKNYLAGTAPDSRIKTLDGELSAGIGEYKIG
KNVLLKVMGLGSCIGVILSDVSTGICGIAHVLLPGASDRGETKYAETAIEKMVEDMVKMGARRSRITAKFAGGAQVFKHM
SLDILKIGDRNAISVEETLIKKNIPILAKDVGGEVGRNVIFNPADGSMIVKYTAKGEVLWL

Sequences:

>Translated_221_residues
MSSVFLFISNESGKAIFLISGDVLVKSFCSLSDTCPFQDSCRSCSLLNAAKNYLAGTAPDSRIKTLDGELSAGIGEYKIG
KNVLLKVMGLGSCIGVILSDVSTGICGIAHVLLPGASDRGETKYAETAIEKMVEDMVKMGARRSRITAKFAGGAQVFKHM
SLDILKIGDRNAISVEETLIKKNIPILAKDVGGEVGRNVIFNPADGSMIVKYTAKGEVLWL
>Mature_220_residues
SSVFLFISNESGKAIFLISGDVLVKSFCSLSDTCPFQDSCRSCSLLNAAKNYLAGTAPDSRIKTLDGELSAGIGEYKIGK
NVLLKVMGLGSCIGVILSDVSTGICGIAHVLLPGASDRGETKYAETAIEKMVEDMVKMGARRSRITAKFAGGAQVFKHMS
LDILKIGDRNAISVEETLIKKNIPILAKDVGGEVGRNVIFNPADGSMIVKYTAKGEVLWL

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED1_METMA (Q8Q012)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632350.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q8Q012
- SMR:   Q8Q012
- GeneID:   1478668
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0326
- NMPDR:   fig|192952.1.peg.326
- HOGENOM:   HBG531149
- OMA:   RITAKFA
- ProtClustDB:   PRK13488
- BioCyc:   MMAZ192952:MM0326-MONOMER
- BRENDA:   3.5.1.44
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 23514; Mature: 23383

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVFLFISNESGKAIFLISGDVLVKSFCSLSDTCPFQDSCRSCSLLNAAKNYLAGTAPD
CCEEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SRIKTLDGELSAGIGEYKIGKNVLLKVMGLGSCIGVILSDVSTGICGIAHVLLPGASDRG
CHHEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ETKYAETAIEKMVEDMVKMGARRSRITAKFAGGAQVFKHMSLDILKIGDRNAISVEETLI
CHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHHH
KKNIPILAKDVGGEVGRNVIFNPADGSMIVKYTAKGEVLWL
HCCCCEEEECCCHHHCCCEEEECCCCCEEEEEECCCCEEEC
>Mature Secondary Structure 
SSVFLFISNESGKAIFLISGDVLVKSFCSLSDTCPFQDSCRSCSLLNAAKNYLAGTAPD
CEEEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SRIKTLDGELSAGIGEYKIGKNVLLKVMGLGSCIGVILSDVSTGICGIAHVLLPGASDRG
CHHEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ETKYAETAIEKMVEDMVKMGARRSRITAKFAGGAQVFKHMSLDILKIGDRNAISVEETLI
CHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHHH
KKNIPILAKDVGGEVGRNVIFNPADGSMIVKYTAKGEVLWL
HCCCCEEEECCCHHHCCCEEEECCCCCEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824