Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is cheR [H]
Identifier: 21226427
GI number: 21226427
Start: 430668
End: 431480
Strand: Reverse
Name: cheR [H]
Synonym: MM_0325
Alternate gene names: 21226427
Gene position: 431480-430668 (Counterclockwise)
Preceding gene: 21226428
Following gene: 21226426
Centisome position: 10.53
GC content: 39.61
Gene sequence:
>813_bases GTGGTTGTAAATATTGATGACGACTTCAATTTTCTTGTGCGAAAGATTTCAAAATCTTCCGGTATTGTCCTGACCGGGTA CAGGGACAGTTATCTCAGAAGAAGAATTGACCTGAGGATGAAAGCTGCAGGAGTGGACAACTATACGTCTTATAGCGGTC TACTGGAAAGGGATAAGCACGAGATGAAAGAAGTCATAAATACGCTTACAGTAAACGTTACTGAGTTTATGCGGGACAGA ACTCCGTTTCTTTTTTTCCGGGAAGAGATCCTGCCGAATATAATGGAAAGAAAAAAGCAGTGTAAAAGCAATATTGTCAG GTTCTGGAGTGCAGCTTGCTCTTACGGGGAAGAGCCTTATTCGATTGCTATCTGTTCAAAAGAGGTCCTGCCTGAAGAAT GGACCGTGTCAATTTATGCAACTGATATTGATGAAAAATGCCTGAAAGGTGCTTCACAGGGAACATACAGTAAAGAACAA TTAAAAAACCTTGACCCCTCCCTTGTAATTAAGTATTTTGAGCCCTCGGGGGAAAACTTCAAAGTAAGAGATATCAGCAA ACTGTCAATAAGGTTCCAGAAGCATGACCTGACAGGCGAACCTCCGATATCAAGGCATTTTGATGCAGTTTTCTGCAGAA ATGTTATGATATATTTTAATGAAAACCAGAAAATAAAAATGTTGAAAGATTTCTATAATTCTCTTTCGGATGGCGGCTAC CTTATTATTGGCAAATCCGAAACCCTACCCGTTGAAATTAGAGAGCTGTTTGCCCATGTAAGCGTGAAAGAAAAGATTTT CAAAAAGGTTTAA
Upstream 100 bases:
>100_bases TTCTGGCAAAAGATGTCGGAGGGGAAGTTGGCAGGAACGTTATTTTTAATCCTGCGGACGGGAGCATGATTGTTAAATAT ACTGCTAAAGGGGAAGTACT
Downstream 100 bases:
>100_bases ATGACGTCCAGGCCTGACTGCCCATTTACATTTCCCACAAGGTAGACATTCTTATTTCACAGGAAGATTTCTAAGAATGA TTTTCTTCCTGTGAATCTGT
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MVVNIDDDFNFLVRKISKSSGIVLTGYRDSYLRRRIDLRMKAAGVDNYTSYSGLLERDKHEMKEVINTLTVNVTEFMRDR TPFLFFREEILPNIMERKKQCKSNIVRFWSAACSYGEEPYSIAICSKEVLPEEWTVSIYATDIDEKCLKGASQGTYSKEQ LKNLDPSLVIKYFEPSGENFKVRDISKLSIRFQKHDLTGEPPISRHFDAVFCRNVMIYFNENQKIKMLKDFYNSLSDGGY LIIGKSETLPVEIRELFAHVSVKEKIFKKV
Sequences:
>Translated_270_residues MVVNIDDDFNFLVRKISKSSGIVLTGYRDSYLRRRIDLRMKAAGVDNYTSYSGLLERDKHEMKEVINTLTVNVTEFMRDR TPFLFFREEILPNIMERKKQCKSNIVRFWSAACSYGEEPYSIAICSKEVLPEEWTVSIYATDIDEKCLKGASQGTYSKEQ LKNLDPSLVIKYFEPSGENFKVRDISKLSIRFQKHDLTGEPPISRHFDAVFCRNVMIYFNENQKIKMLKDFYNSLSDGGY LIIGKSETLPVEIRELFAHVSVKEKIFKKV >Mature_270_residues MVVNIDDDFNFLVRKISKSSGIVLTGYRDSYLRRRIDLRMKAAGVDNYTSYSGLLERDKHEMKEVINTLTVNVTEFMRDR TPFLFFREEILPNIMERKKQCKSNIVRFWSAACSYGEEPYSIAICSKEVLPEEWTVSIYATDIDEKCLKGASQGTYSKEQ LKNLDPSLVIKYFEPSGENFKVRDISKLSIRFQKHDLTGEPPISRHFDAVFCRNVMIYFNENQKIKMLKDFYNSLSDGGY LIIGKSETLPVEIRELFAHVSVKEKIFKKV
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=258, Percent_Identity=33.7209302325581, Blast_Score=134, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 31415; Mature: 31415
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVNIDDDFNFLVRKISKSSGIVLTGYRDSYLRRRIDLRMKAAGVDNYTSYSGLLERDKH CEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH EMKEVINTLTVNVTEFMRDRTPFLFFREEILPNIMERKKQCKSNIVRFWSAACSYGEEPY HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE SIAICSKEVLPEEWTVSIYATDIDEKCLKGASQGTYSKEQLKNLDPSLVIKYFEPSGENF EEEEECHHHCCCCEEEEEEEECCHHHHHCCCCCCCCCHHHHHCCCHHEEEEEECCCCCCE KVRDISKLSIRFQKHDLTGEPPISRHFDAVFCRNVMIYFNENQKIKMLKDFYNSLSDGGY EEEEHHEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCE LIIGKSETLPVEIRELFAHVSVKEKIFKKV EEEECCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVVNIDDDFNFLVRKISKSSGIVLTGYRDSYLRRRIDLRMKAAGVDNYTSYSGLLERDKH CEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH EMKEVINTLTVNVTEFMRDRTPFLFFREEILPNIMERKKQCKSNIVRFWSAACSYGEEPY HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE SIAICSKEVLPEEWTVSIYATDIDEKCLKGASQGTYSKEQLKNLDPSLVIKYFEPSGENF EEEEECHHHCCCCEEEEEEEECCHHHHHCCCCCCCCCHHHHHCCCHHEEEEEECCCCCCE KVRDISKLSIRFQKHDLTGEPPISRHFDAVFCRNVMIYFNENQKIKMLKDFYNSLSDGGY EEEEHHEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCE LIIGKSETLPVEIRELFAHVSVKEKIFKKV EEEECCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]