Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is cheC [H]
Identifier: 21226429
GI number: 21226429
Start: 432133
End: 432744
Strand: Reverse
Name: cheC [H]
Synonym: MM_0327
Alternate gene names: 21226429
Gene position: 432744-432133 (Counterclockwise)
Preceding gene: 21226430
Following gene: 21226428
Centisome position: 10.56
GC content: 43.3
Gene sequence:
>612_bases GTGATATTGATGACTGATCTGGATAAGCTTGGTGAAGAGGAAATGGATGTTTTGAAGGAACTCGGCAATATCGGAACCGG ACACGCTGCAACATCTCTTTCCAAGCTGCTTAATAAAGATGTCTATCTTTCAGTGCCAAAAGTTAAGGTGGGGGAAATAA AAAACCTCTCCCGTGAATTCATTGGCGAAGTTGTTGCCGGAGTGATTATAGCACTTCAGGACCTCGAAGAAAAGAAATCC GGATATCTGTACATCATGTTTCCGGAAAAGTCTGCAAGAAAAATTGCAGGCGATCTTTTCGGAATGGATGAGCTTGATGA AGAGATGTATGCGTCCACGATCATGGAGGTCGGGAATATACTTTCTTCGTCCTTCTGTGATGCGTCAGCTGATTTTATGA ACATCATATTACTCCCTTCCCCTCCAAGTTTTGCAGTCGATGTCCCCACTGCAGTCATCGATTCTGTAGTTTCACAGATG GCAAAGAACACCAACCATATTATCCTGTTTGAGACCTCTTTAAGCTCTGATTCGGATATAGAGATTTATCTGGCCCTGCT CCCTGAACCCTGCCTGCTTGATGATATGATGAAGATAATGGGACGATTATGA
Upstream 100 bases:
>100_bases CTCGGAAATGTTTTATCGAACTCAAAAGGATTCATCGGTGCCACCATACTGGGAGATGGGCGTGTGATACCGATTATAGA TGTTTCAATGCTTATAAAAG
Downstream 100 bases:
>100_bases GCAGCGTCTTCCTGTTCATTTCGAATGAAAGCGGAAAAGCGATTTTCCTGATCAGCGGGGACGTACTGGTAAAGTCCTTC TGCTCACTTTCGGATACATG
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MILMTDLDKLGEEEMDVLKELGNIGTGHAATSLSKLLNKDVYLSVPKVKVGEIKNLSREFIGEVVAGVIIALQDLEEKKS GYLYIMFPEKSARKIAGDLFGMDELDEEMYASTIMEVGNILSSSFCDASADFMNIILLPSPPSFAVDVPTAVIDSVVSQM AKNTNHIILFETSLSSDSDIEIYLALLPEPCLLDDMMKIMGRL
Sequences:
>Translated_203_residues MILMTDLDKLGEEEMDVLKELGNIGTGHAATSLSKLLNKDVYLSVPKVKVGEIKNLSREFIGEVVAGVIIALQDLEEKKS GYLYIMFPEKSARKIAGDLFGMDELDEEMYASTIMEVGNILSSSFCDASADFMNIILLPSPPSFAVDVPTAVIDSVVSQM AKNTNHIILFETSLSSDSDIEIYLALLPEPCLLDDMMKIMGRL >Mature_203_residues MILMTDLDKLGEEEMDVLKELGNIGTGHAATSLSKLLNKDVYLSVPKVKVGEIKNLSREFIGEVVAGVIIALQDLEEKKS GYLYIMFPEKSARKIAGDLFGMDELDEEMYASTIMEVGNILSSSFCDASADFMNIILLPSPPSFAVDVPTAVIDSVVSQM AKNTNHIILFETSLSSDSDIEIYLALLPEPCLLDDMMKIMGRL
Specific function: Involved in restoring normal CheY-P levels following the addition of attractant by increasing the rate of CheY-P hydrolysis. Is only 6% as active as FliY, which indicates that CheC may function after addition of an attractant to cope with increased levels
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 [H]
Pfam domain/function: PF04509 CheC [H]
EC number: NA
Molecular weight: Translated: 22260; Mature: 22260
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMTDLDKLGEEEMDVLKELGNIGTGHAATSLSKLLNKDVYLSVPKVKVGEIKNLSREF CEEECCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH IGEVVAGVIIALQDLEEKKSGYLYIMFPEKSARKIAGDLFGMDELDEEMYASTIMEVGNI HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LSSSFCDASADFMNIILLPSPPSFAVDVPTAVIDSVVSQMAKNTNHIILFETSLSSDSDI HHHHCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC EIYLALLPEPCLLDDMMKIMGRL EEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MILMTDLDKLGEEEMDVLKELGNIGTGHAATSLSKLLNKDVYLSVPKVKVGEIKNLSREF CEEECCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH IGEVVAGVIIALQDLEEKKSGYLYIMFPEKSARKIAGDLFGMDELDEEMYASTIMEVGNI HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LSSSFCDASADFMNIILLPSPPSFAVDVPTAVIDSVVSQMAKNTNHIILFETSLSSDSDI HHHHCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC EIYLALLPEPCLLDDMMKIMGRL EEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2832368; 9384377 [H]