Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226392
Identifier: 21226392
GI number: 21226392
Start: 389639
End: 390187
Strand: Direct
Name: 21226392
Synonym: MM_0290
Alternate gene names: NA
Gene position: 389639-390187 (Clockwise)
Preceding gene: 21226391
Following gene: 21226401
Centisome position: 9.51
GC content: 48.27
Gene sequence:
>549_bases ATGAAACTGATTATACTTTCCGATACCCATCTCAAGACAGGAGAGATCCCTGGACAGCTTCAAACCCTTCTCGAAGACTG CGACCTTATTGTCCATGCAGGGGATTTTAGCACTGTAGAAGCATACCGGGCTTTTAATGCCAGCGGCAAGCTGAAAGCCG TTTCCGGAAACGATGACAGCCCCGAACTCAGGAAGCTCCTTCCCGAAAGGCTGAAATTTGAGGTTGAAGGGGTAAGGATA GGAGTGGTCCATGAGGCAGGGCTCTCAGTGATGGACACGACCGCACAGGGCTACCTGGCAAAAGAAATGGAAGTCGATGT CCTGATTTTCGGGCACCTTCACCGCCCTATCATTGAAAGGAAGGATGTAATGCTTGTATGCCCGGGTTCTCCTACAAAGC CCAGGATGTCAAACCCAGGTGTTGTAGAACTCATAATCGAAAAAGGGAGCATAGAAGGAAGGATAATTACCCTGGAAGGA GACAGCTGCGGATATATAAAGTTCCGGGATGCTCTGAAAAGGCAAAAAGAAGAAGAGGGTCATAAATAA
Upstream 100 bases:
>100_bases TATGAATTCCGGATTTAAGCCTGATTCCAAGGCTTCCCGAAGTTTACGCTGTACATTTTTATCTTAAAATGGTATATTTT ACTTATAGCGGAGGTTTTCC
Downstream 100 bases:
>100_bases AAGTGAGAGTAAAAATGGGGGTGGAAATTTAAAACTCGAGGGGGTCTTAAATGCCAGATTCCGGGAAACTGAAGGAATCT TAAATGCCGGAACTAGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKLIILSDTHLKTGEIPGQLQTLLEDCDLIVHAGDFSTVEAYRAFNASGKLKAVSGNDDSPELRKLLPERLKFEVEGVRI GVVHEAGLSVMDTTAQGYLAKEMEVDVLIFGHLHRPIIERKDVMLVCPGSPTKPRMSNPGVVELIIEKGSIEGRIITLEG DSCGYIKFRDALKRQKEEEGHK
Sequences:
>Translated_182_residues MKLIILSDTHLKTGEIPGQLQTLLEDCDLIVHAGDFSTVEAYRAFNASGKLKAVSGNDDSPELRKLLPERLKFEVEGVRI GVVHEAGLSVMDTTAQGYLAKEMEVDVLIFGHLHRPIIERKDVMLVCPGSPTKPRMSNPGVVELIIEKGSIEGRIITLEG DSCGYIKFRDALKRQKEEEGHK >Mature_182_residues MKLIILSDTHLKTGEIPGQLQTLLEDCDLIVHAGDFSTVEAYRAFNASGKLKAVSGNDDSPELRKLLPERLKFEVEGVRI GVVHEAGLSVMDTTAQGYLAKEMEVDVLIFGHLHRPIIERKDVMLVCPGSPTKPRMSNPGVVELIIEKGSIEGRIITLEG DSCGYIKFRDALKRQKEEEGHK
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 20135; Mature: 20135
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIILSDTHLKTGEIPGQLQTLLEDCDLIVHAGDFSTVEAYRAFNASGKLKAVSGNDDS CEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHCCCCCCEEEECCCCCC PELRKLLPERLKFEVEGVRIGVVHEAGLSVMDTTAQGYLAKEMEVDVLIFGHLHRPIIER HHHHHHCHHHHCEEECCEEEEEEECCCCEEEECCCCCEEEECCEEEEEEEECCCCCCCCC KDVMLVCPGSPTKPRMSNPGVVELIIEKGSIEGRIITLEGDSCGYIKFRDALKRQKEEEG CCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCC HK CC >Mature Secondary Structure MKLIILSDTHLKTGEIPGQLQTLLEDCDLIVHAGDFSTVEAYRAFNASGKLKAVSGNDDS CEEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHCCCCCCEEEECCCCCC PELRKLLPERLKFEVEGVRIGVVHEAGLSVMDTTAQGYLAKEMEVDVLIFGHLHRPIIER HHHHHHCHHHHCEEECCEEEEEEECCCCEEEECCCCCEEEECCEEEEEEEECCCCCCCCC KDVMLVCPGSPTKPRMSNPGVVELIIEKGSIEGRIITLEGDSCGYIKFRDALKRQKEEEG CCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCC HK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]