Click here to switch to the map view.

The map label for this gene is 21226391

Identifier: 21226391

GI number: 21226391

Start: 388583

End: 389371

Strand: Direct

Name: 21226391

Synonym: MM_0289

Alternate gene names: NA

Gene position: 388583-389371 (Clockwise)

Preceding gene: 21226390

Following gene: 21226392

Centisome position: 9.49

GC content: 49.56

Gene sequence:

>789_bases
ATGATTAAAATCCTCCAGACCAAGAGCGGAGTCACCAAATTTCAGGTCCTCATTGAGATTGCAGCCCACCAGCCCAATGT
AAGGCAGAAAGAAATTGCCGCAAAAATAGGAATAACCCCCCAGGCAGTTTCCGAATACATTAAGGAGCTTGTGAATGACG
GGCTGATCGTCACCGAGGGCCGTGTCCGGTACAGGATAACGAAAGAAGGCGTAGAGTGGGTTCTTGAGAATGCAACCGAA
ATGAAGCAGTATGCCCGCTTTGTCATGGAGGATATAATCAGCCATGTCTCTACCTGGACAGCCATTACAAGAGAGGAGGT
CAAAGAGGGCCAGCAGGTCTACCTGAAAATGGATCACGGACTCCTCTATGTAAGCAGCAGGGAAGTAACAGGCGCATCAG
GCGCCATTATATCCGACGCCGCTGAAGGAGAAGATGTAGGAGTAACCAGCCTCAAGGGCCTTATAGACCTGGAAAATGCA
ACCATCACGATCTGCAAGGTTCCGAGGGTTGAGCGCGGAGGGTCAAGAAAAGTTGACCTCGAGCGCCTGAAGATGCTGGC
AGACGCAAAACCCTATATAGCAGCAATAGGCGTTGAGTCTTTAATCGCACTCCGCAAGATAGGCATAAGCCCGAATGTAA
TGTTCGGGACAAACGAATCCGTTATTGAGGCTGCATATCACGGGCTTTCATCCCTTGTGGTTTCTGTGGACGAACAGGTC
TCTGCTCTTCTTAACAGGCTGGAAACCGAAAACCTCGAGTATGAACTCGTTGACCTGACAGTCGAATAA

Upstream 100 bases:

>100_bases
ATCCGTTCTATATCTGTGCTGTTGCCCGCAGGTCCGAAAGGCTTTCAGTAATGGGGCAGAGATTAAAATTAATTGAAGAT
GTAGAGGAGAATTACGATTG

Downstream 100 bases:

>100_bases
GAGTCTTTTTAACGTTTTATATTTAATTTTGGGTTCCATGCATCCGGAACTCGAAACTTACTTTTTTAATGTAAATTAAA
TTGCAGGTTCCAGTATGAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEGRVRYRITKEGVEWVLENATE
MKQYARFVMEDIISHVSTWTAITREEVKEGQQVYLKMDHGLLYVSSREVTGASGAIISDAAEGEDVGVTSLKGLIDLENA
TITICKVPRVERGGSRKVDLERLKMLADAKPYIAAIGVESLIALRKIGISPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
SALLNRLETENLEYELVDLTVE

Sequences:

>Translated_262_residues
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEGRVRYRITKEGVEWVLENATE
MKQYARFVMEDIISHVSTWTAITREEVKEGQQVYLKMDHGLLYVSSREVTGASGAIISDAAEGEDVGVTSLKGLIDLENA
TITICKVPRVERGGSRKVDLERLKMLADAKPYIAAIGVESLIALRKIGISPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
SALLNRLETENLEYELVDLTVE
>Mature_262_residues
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEGRVRYRITKEGVEWVLENATE
MKQYARFVMEDIISHVSTWTAITREEVKEGQQVYLKMDHGLLYVSSREVTGASGAIISDAAEGEDVGVTSLKGLIDLENA
TITICKVPRVERGGSRKVDLERLKMLADAKPYIAAIGVESLIALRKIGISPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
SALLNRLETENLEYELVDLTVE

Specific function: Unknown

COG id: COG1497

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001808
- InterPro:   IPR000835
- InterPro:   IPR012015
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 28900; Mature: 28900

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEG
CEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECC
RVRYRITKEGVEWVLENATEMKQYARFVMEDIISHVSTWTAITREEVKEGQQVYLKMDHG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
LLYVSSREVTGASGAIISDAAEGEDVGVTSLKGLIDLENATITICKVPRVERGGSRKVDL
EEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHEEEECCCEEEEEECCCCCCCCCCCCCH
ERLKMLADAKPYIAAIGVESLIALRKIGISPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
HHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
SALLNRLETENLEYELVDLTVE
HHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEG
CEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECC
RVRYRITKEGVEWVLENATEMKQYARFVMEDIISHVSTWTAITREEVKEGQQVYLKMDHG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
LLYVSSREVTGASGAIISDAAEGEDVGVTSLKGLIDLENATITICKVPRVERGGSRKVDL
EEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHEEEECCCEEEEEECCCCCCCCCCCCCH
ERLKMLADAKPYIAAIGVESLIALRKIGISPNVMFGTNESVIEAAYHGLSSLVVSVDEQV
HHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
SALLNRLETENLEYELVDLTVE
HHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]