The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226343

Identifier: 21226343

GI number: 21226343

Start: 323172

End: 324674

Strand: Reverse

Name: 21226343

Synonym: MM_0241

Alternate gene names: NA

Gene position: 324674-323172 (Counterclockwise)

Preceding gene: 21226345

Following gene: 21226342

Centisome position: 7.93

GC content: 47.17

Gene sequence:

>1503_bases
ATGGTAAAAAAATCAATTCATGAGATTAATAAAAAAATTGAAGATGGGAGCGTCAATGTAGTCACAGCCGAAGAAATGGT
TGGAATTGTTGAAGACCTCGGCGTGGAAAGTGCTGCGAAAGAAGTGGATGTGGTGACAACAGGCACTTTCGGAGCCATGT
GCTCATCAGGTTTGATGCTCAATCTGGGTCATTCAGAACCCCCGATTAAAATTCAGAAATTATGGTTCAATAATGTTGAG
GCGTACAGCGGGATTGCTGCTGTTGATGCTTACCTCGGAGCTGCCCAGATCTCGGACACACGCGGGATTCAGTATGGAGG
AGCACACGTTATTGAAGACCTTCTCAGGGGAAAAGAAATCAATGTTCATGCAACTTCCTACGGGACAGACTGCTACCCGA
GAAAAGTGCTTGATACGGCGATCACCCTTGAAGACTTAAACGAAGCCGTTCTTCTCAACCCCAGGAACGCATACCAGAAA
TACAACGCTGCAACAAACAGTTCTAAAAGGATCCTGAATACTTATATGGGTGAGCTTCTGCCCAACTTCGGAAACGTCAC
TTATTCCGGAGCAGGAGTGCTTTCTCCCCTGTCAAACGACCCGGGATATGAAACTATAGGAACAGGCACAAGGATTTTTC
TTGGAGGTGCGCAGGGTTATGTCATAGGCAACGGGACTCAGCATTCCCCATCCGGAAGTTTTGGAACCCTCATGCTTAAA
GGGAACCTTAAGGAAATGAGCCCTGATTATTTAAGAGCCGCCTCTTTTGCAGGTTACGGGACAACCCTTTACATGGGAAT
CGGGATTCCTATTCCTATCCTGAATGAAAAGCTTGCAGCTGCAACTGCAGTACGTGACGAGGACATCACCACCAGTGTGC
TTGACTATGCTATCGGAAGCAGGGACAAGCCTGTGGTCAGGCAGGTAAATTATGCCGAACTCAGATCTGGATCTGTGCAG
ATTGAAGGAAAGGATGTTCCAACATCTTCCCTTTCAAGCTTCAAGAACGCCAGAAAGATTGCAAATGAGCTGAAGGAATG
GGTAAAACACGGAAAGTTCTTTGTCAGCATGCCTGTGGAAAAGCTTTGCAGTGAAGGCTCGGCAAAGCCCATGAAGCAGA
CTCAGGCAGTGCCTCTTGTAAAAGACGTTATGTCCGATTTCATCGTCACTATCAAAAAGGATCAGACTGTCCAGGACGCT
GCAAAGAAAATCTGGGAGAACTCTTTCAACCACCTTGCAGTAGTTTCGGATACCGGTGAACTTGTAGGGATCCTCACAGC
CTGGGATATCTCAAAGGCAGTCGCGGAAAACATTTTCGATTCCGTAGAAAGCGTTATGACGAAAAAGGTCCTTACCTGCG
CCCCTAACGAACCTGTGGACCTTGCAGCCCGCAGGCTTGACCGCTACGGAGTTTCAGCAATGCCGGTGATTGATGCGCAG
AAGAAAGTACTCGGAATTATCACAAGCGACAATATAAGCAAGCTCTTTGCAAGGAGGTACTGA

Upstream 100 bases:

>100_bases
TTATTATAGAGCTGCTTGTTACCCCCGGGATTATCACAAGTAATATATAATTCTGGCAAAAATTACCATCTAGATAAGTT
TATAGCAAGAGGAAACCCGT

Downstream 100 bases:

>100_bases
GCATGAAAATAAAGATCTGCATCCCTACTGAAAGGATACATAACCCAATTATCTCCGAGTCCATCATAGAAACAGGGATC
CTGCTTAATATTATGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MVKKSIHEINKKIEDGSVNVVTAEEMVGIVEDLGVESAAKEVDVVTTGTFGAMCSSGLMLNLGHSEPPIKIQKLWFNNVE
AYSGIAAVDAYLGAAQISDTRGIQYGGAHVIEDLLRGKEINVHATSYGTDCYPRKVLDTAITLEDLNEAVLLNPRNAYQK
YNAATNSSKRILNTYMGELLPNFGNVTYSGAGVLSPLSNDPGYETIGTGTRIFLGGAQGYVIGNGTQHSPSGSFGTLMLK
GNLKEMSPDYLRAASFAGYGTTLYMGIGIPIPILNEKLAAATAVRDEDITTSVLDYAIGSRDKPVVRQVNYAELRSGSVQ
IEGKDVPTSSLSSFKNARKIANELKEWVKHGKFFVSMPVEKLCSEGSAKPMKQTQAVPLVKDVMSDFIVTIKKDQTVQDA
AKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIFDSVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQ
KKVLGIITSDNISKLFARRY

Sequences:

>Translated_500_residues
MVKKSIHEINKKIEDGSVNVVTAEEMVGIVEDLGVESAAKEVDVVTTGTFGAMCSSGLMLNLGHSEPPIKIQKLWFNNVE
AYSGIAAVDAYLGAAQISDTRGIQYGGAHVIEDLLRGKEINVHATSYGTDCYPRKVLDTAITLEDLNEAVLLNPRNAYQK
YNAATNSSKRILNTYMGELLPNFGNVTYSGAGVLSPLSNDPGYETIGTGTRIFLGGAQGYVIGNGTQHSPSGSFGTLMLK
GNLKEMSPDYLRAASFAGYGTTLYMGIGIPIPILNEKLAAATAVRDEDITTSVLDYAIGSRDKPVVRQVNYAELRSGSVQ
IEGKDVPTSSLSSFKNARKIANELKEWVKHGKFFVSMPVEKLCSEGSAKPMKQTQAVPLVKDVMSDFIVTIKKDQTVQDA
AKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIFDSVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQ
KKVLGIITSDNISKLFARRY
>Mature_500_residues
MVKKSIHEINKKIEDGSVNVVTAEEMVGIVEDLGVESAAKEVDVVTTGTFGAMCSSGLMLNLGHSEPPIKIQKLWFNNVE
AYSGIAAVDAYLGAAQISDTRGIQYGGAHVIEDLLRGKEINVHATSYGTDCYPRKVLDTAITLEDLNEAVLLNPRNAYQK
YNAATNSSKRILNTYMGELLPNFGNVTYSGAGVLSPLSNDPGYETIGTGTRIFLGGAQGYVIGNGTQHSPSGSFGTLMLK
GNLKEMSPDYLRAASFAGYGTTLYMGIGIPIPILNEKLAAATAVRDEDITTSVLDYAIGSRDKPVVRQVNYAELRSGSVQ
IEGKDVPTSSLSSFKNARKIANELKEWVKHGKFFVSMPVEKLCSEGSAKPMKQTQAVPLVKDVMSDFIVTIKKDQTVQDA
AKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIFDSVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQ
KKVLGIITSDNISKLFARRY

Specific function: Unknown

COG id: COG1900

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR002708
- InterPro:   IPR016426
- ProDom:   PD011569 [H]

Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]

EC number: NA

Molecular weight: Translated: 54051; Mature: 54051

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKSIHEINKKIEDGSVNVVTAEEMVGIVEDLGVESAAKEVDVVTTGTFGAMCSSGLML
CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHCCCCEE
NLGHSEPPIKIQKLWFNNVEAYSGIAAVDAYLGAAQISDTRGIQYGGAHVIEDLLRGKEI
ECCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
NVHATSYGTDCYPRKVLDTAITLEDLNEAVLLNPRNAYQKYNAATNSSKRILNTYMGELL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHC
PNFGNVTYSGAGVLSPLSNDPGYETIGTGTRIFLGGAQGYVIGNGTQHSPSGSFGTLMLK
CCCCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEE
GNLKEMSPDYLRAASFAGYGTTLYMGIGIPIPILNEKLAAATAVRDEDITTSVLDYAIGS
CCHHHCCHHHHHHHHCCCCCEEEEEECCCCCCHHCHHHHHHHHHCCCCHHHHHHHHHHCC
RDKPVVRQVNYAELRSGSVQIEGKDVPTSSLSSFKNARKIANELKEWVKHGKFFVSMPVE
CCCCHHHCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH
KLCSEGSAKPMKQTQAVPLVKDVMSDFIVTIKKDQTVQDAAKKIWENSFNHLAVVSDTGE
HHHCCCCCCCHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCC
LVGILTAWDISKAVAENIFDSVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQ
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCC
KKVLGIITSDNISKLFARRY
CCEEEEEECCCHHHHHHHCC
>Mature Secondary Structure
MVKKSIHEINKKIEDGSVNVVTAEEMVGIVEDLGVESAAKEVDVVTTGTFGAMCSSGLML
CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHCCCCEE
NLGHSEPPIKIQKLWFNNVEAYSGIAAVDAYLGAAQISDTRGIQYGGAHVIEDLLRGKEI
ECCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
NVHATSYGTDCYPRKVLDTAITLEDLNEAVLLNPRNAYQKYNAATNSSKRILNTYMGELL
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHC
PNFGNVTYSGAGVLSPLSNDPGYETIGTGTRIFLGGAQGYVIGNGTQHSPSGSFGTLMLK
CCCCCEEECCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEE
GNLKEMSPDYLRAASFAGYGTTLYMGIGIPIPILNEKLAAATAVRDEDITTSVLDYAIGS
CCHHHCCHHHHHHHHCCCCCEEEEEECCCCCCHHCHHHHHHHHHCCCCHHHHHHHHHHCC
RDKPVVRQVNYAELRSGSVQIEGKDVPTSSLSSFKNARKIANELKEWVKHGKFFVSMPVE
CCCCHHHCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH
KLCSEGSAKPMKQTQAVPLVKDVMSDFIVTIKKDQTVQDAAKKIWENSFNHLAVVSDTGE
HHHCCCCCCCHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCC
LVGILTAWDISKAVAENIFDSVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQ
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCC
KKVLGIITSDNISKLFARRY
CCEEEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]