Click here to switch to the map view.

The map label for this gene is yfdZ [C]

Identifier: 21226345

GI number: 21226345

Start: 325483

End: 326625

Strand: Reverse

Name: yfdZ [C]

Synonym: MM_0243

Alternate gene names: 21226345

Gene position: 326625-325483 (Counterclockwise)

Preceding gene: 21226346

Following gene: 21226343

Centisome position: 7.97

GC content: 48.82

Gene sequence:

>1143_bases
ATGACATCCGCAAGGCTTAAGCGTGTAGAAGAATCCGCAACGATCAGGATCTCCAATATTGCAACCAGAATGATTAAAGA
GGGTACAGACGTTATCAACTTTAGCCTTGGCGAACCTGATTTCGATACCCCGAAAAATATCTGCGATGCCGCAGCAAAGG
CTATGTATGAGGGAAAAACCCATTATGCCCCTTCTGCAGGCATTCCGGAACTGAGATCTGCTATTGCCGAAAAACTGAGG
ACTGAGAACCATCTGGATGTGAGTGAAAAAGATGTGCTGGTCACTCCGGGTGCAAAGCAGGGGATTTTCGAAATAATGAT
GGGTTCCCTCGACGACGGGGATCAGGCCCTCCTCTTTGATCCTGCATGGGTAACTTATGATGCCTGCATCCGTTTTGCAG
GGGCAGATACGGTTTGGGTTCCCACAGTTCCTGAGAAAGGTTTCCTGCCTGACAATTTTGCCGAATACATAAATGATAAA
ACAAAACTCATTGTTGTAAACAGCCCCGGCAACCCGACAGGCGGCGTATTCGGGAAAAAGACCCTTCAGTGCATTGCCGA
TATAGCAATTGACCATGACCTTCTGGTAGTCTCGGACGAGATCTATGAGAAAATCATCTATGACAGGGAACACATCAGCA
TCGGCAGCTTCGATGGGATGCAGGAGAGGACCATTACTGTAAACGGTTTTTCCAAAGCATACGCAATGACCGGCTGGAGG
CTCGGATACCTGACAGCCCCTCCTGAGATTTTCAAGCTACTGCAGAAGATCCAGTCGCACTCCGTAAGCAGCGCTACCAC
CTTTGTCCAGTACGGCGGGCTTGAAGCCCTTCAGGGACCTCAGGAAGGGGTCAAGGCAATGGTAGACCGCTTTAAAATGC
GCAGGGACATCCTTATTGACGGGCTGAATAAAATGGGGCTGGAATGCAAGAAGCCGGATGGTGCTTTTTACGCCTTTGCC
AATGTAAGCGATTATGGAAACGGGACTGAAGTTGCTGAAAAGCTCCTGAAAGAAGCTCATGTGGCAGTAACTCCCGGAAT
CGCTTTCGGGTCTTCGGGCGAGGACTTTATCCGGATTTCCTATGCAACGTCCATTGATAGAATTCGTGAAGCCCTTGACA
GGCTTGAAAAAGTGTTTGCATAA

Upstream 100 bases:

>100_bases
CCAAAAGGGCTGTCGAAGCTGCGGTAAAGCTGGTGCGGCGGCTGTGAAATTCTTTAACGTCTGATAAGCTAGCAAAATGT
AATAAACCAGGACCATCCCT

Downstream 100 bases:

>100_bases
AACAGCAGGCGGTATGGGTAAGTTTACCCGTACCGTTTAAGGACTTCTTTTATAATTGTGCCGGTACTGCAAAGGGGGCA
TTCTTTTGAAAGCGGGATCC

Product: aspartate aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTSARLKRVEESATIRISNIATRMIKEGTDVINFSLGEPDFDTPKNICDAAAKAMYEGKTHYAPSAGIPELRSAIAEKLR
TENHLDVSEKDVLVTPGAKQGIFEIMMGSLDDGDQALLFDPAWVTYDACIRFAGADTVWVPTVPEKGFLPDNFAEYINDK
TKLIVVNSPGNPTGGVFGKKTLQCIADIAIDHDLLVVSDEIYEKIIYDREHISIGSFDGMQERTITVNGFSKAYAMTGWR
LGYLTAPPEIFKLLQKIQSHSVSSATTFVQYGGLEALQGPQEGVKAMVDRFKMRRDILIDGLNKMGLECKKPDGAFYAFA
NVSDYGNGTEVAEKLLKEAHVAVTPGIAFGSSGEDFIRISYATSIDRIREALDRLEKVFA

Sequences:

>Translated_380_residues
MTSARLKRVEESATIRISNIATRMIKEGTDVINFSLGEPDFDTPKNICDAAAKAMYEGKTHYAPSAGIPELRSAIAEKLR
TENHLDVSEKDVLVTPGAKQGIFEIMMGSLDDGDQALLFDPAWVTYDACIRFAGADTVWVPTVPEKGFLPDNFAEYINDK
TKLIVVNSPGNPTGGVFGKKTLQCIADIAIDHDLLVVSDEIYEKIIYDREHISIGSFDGMQERTITVNGFSKAYAMTGWR
LGYLTAPPEIFKLLQKIQSHSVSSATTFVQYGGLEALQGPQEGVKAMVDRFKMRRDILIDGLNKMGLECKKPDGAFYAFA
NVSDYGNGTEVAEKLLKEAHVAVTPGIAFGSSGEDFIRISYATSIDRIREALDRLEKVFA
>Mature_379_residues
TSARLKRVEESATIRISNIATRMIKEGTDVINFSLGEPDFDTPKNICDAAAKAMYEGKTHYAPSAGIPELRSAIAEKLRT
ENHLDVSEKDVLVTPGAKQGIFEIMMGSLDDGDQALLFDPAWVTYDACIRFAGADTVWVPTVPEKGFLPDNFAEYINDKT
KLIVVNSPGNPTGGVFGKKTLQCIADIAIDHDLLVVSDEIYEKIIYDREHISIGSFDGMQERTITVNGFSKAYAMTGWRL
GYLTAPPEIFKLLQKIQSHSVSSATTFVQYGGLEALQGPQEGVKAMVDRFKMRRDILIDGLNKMGLECKKPDGAFYAFAN
VSDYGNGTEVAEKLLKEAHVAVTPGIAFGSSGEDFIRISYATSIDRIREALDRLEKVFA

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=385, Percent_Identity=29.8701298701299, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI56713256, Length=385, Percent_Identity=29.8701298701299, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI95147551, Length=349, Percent_Identity=27.2206303724928, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI169881279, Length=349, Percent_Identity=27.2206303724928, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI169881281, Length=230, Percent_Identity=29.1304347826087, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4507369, Length=370, Percent_Identity=25.9459459459459, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI7705897, Length=342, Percent_Identity=25.4385964912281, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI33469970, Length=342, Percent_Identity=25.4385964912281, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI1788722, Length=363, Percent_Identity=31.404958677686, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=28.5714285714286, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1788627, Length=380, Percent_Identity=28.1578947368421, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787909, Length=352, Percent_Identity=21.875, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71994472, Length=396, Percent_Identity=28.030303030303, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI71994476, Length=396, Percent_Identity=28.030303030303, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17567369, Length=390, Percent_Identity=28.2051282051282, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17567663, Length=367, Percent_Identity=26.7029972752044, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71981209, Length=366, Percent_Identity=21.0382513661202, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322401, Length=397, Percent_Identity=24.1813602015113, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320317, Length=352, Percent_Identity=24.1477272727273, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6323118, Length=356, Percent_Identity=23.314606741573, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573069, Length=322, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646114, Length=322, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573067, Length=322, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573065, Length=322, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI18859735, Length=387, Percent_Identity=22.9974160206718, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24641770, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641760, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641768, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641766, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641764, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45551451, Length=399, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41758; Mature: 41627

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARLKRVEESATIRISNIATRMIKEGTDVINFSLGEPDFDTPKNICDAAAKAMYEGKT
CCCHHHHHHHHCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
HYAPSAGIPELRSAIAEKLRTENHLDVSEKDVLVTPGAKQGIFEIMMGSLDDGDQALLFD
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEC
PAWVTYDACIRFAGADTVWVPTVPEKGFLPDNFAEYINDKTKLIVVNSPGNPTGGVFGKK
CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHH
TLQCIADIAIDHDLLVVSDEIYEKIIYDREHISIGSFDGMQERTITVNGFSKAYAMTGWR
HHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCHHHHHHCCEE
LGYLTAPPEIFKLLQKIQSHSVSSATTFVQYGGLEALQGPQEGVKAMVDRFKMRRDILID
EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLNKMGLECKKPDGAFYAFANVSDYGNGTEVAEKLLKEAHVAVTPGIAFGSSGEDFIRIS
CHHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCEEECCCCCCEEEEE
YATSIDRIREALDRLEKVFA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSARLKRVEESATIRISNIATRMIKEGTDVINFSLGEPDFDTPKNICDAAAKAMYEGKT
CCHHHHHHHHCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
HYAPSAGIPELRSAIAEKLRTENHLDVSEKDVLVTPGAKQGIFEIMMGSLDDGDQALLFD
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEC
PAWVTYDACIRFAGADTVWVPTVPEKGFLPDNFAEYINDKTKLIVVNSPGNPTGGVFGKK
CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHH
TLQCIADIAIDHDLLVVSDEIYEKIIYDREHISIGSFDGMQERTITVNGFSKAYAMTGWR
HHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCHHHHHHCCEE
LGYLTAPPEIFKLLQKIQSHSVSSATTFVQYGGLEALQGPQEGVKAMVDRFKMRRDILID
EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLNKMGLECKKPDGAFYAFANVSDYGNGTEVAEKLLKEAHVAVTPGIAFGSSGEDFIRIS
CHHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCEEECCCCCCEEEEE
YATSIDRIREALDRLEKVFA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]