Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is cheB1
Identifier: 161485682
GI number: 161485682
Start: 435363
End: 436415
Strand: Reverse
Name: cheB1
Synonym: MM_0329
Alternate gene names: 161485682
Gene position: 436415-435363 (Counterclockwise)
Preceding gene: 21226432
Following gene: 21226430
Centisome position: 10.65
GC content: 44.44
Gene sequence:
>1053_bases ATGATTCGTACTCTTATTGTTGATGATTCTGCCTTCATGCGGATGGCAATAAGAAGCATGCTTGCCAGCAGCCCGGATAT AAAGATAGCAGGAGATGCGTGTAATGGAAAGGAGGCTGTAGATAAATCAAAATCATTGCACCCTGACATAATCATAATGG ACGTTAACATGCCAGTCATGGACGGGCTTACAGCCGTTAAAACCATTATGAGTACGGACCCTGTCCCGATAATCATGTTC AGTACTCTGACAGTAGAGGGCTCAAAAGAGGCTTTAGAAGCTTTGCAGCTTGGAGCAATAGATTTTGTCCCGAAATCTGA ATCTCACCACGATGTGAATAAGATTGAGAAAGAGCTTGTTGACAAAATAAGAAATATTCACAGCTCGAACCCCAGCATAT TAAGATTAATTAATATGAGGAAATTTAAAGGCGAGGTTGTCAGAGGGAAATGGAGCTGTGCTGGAGACTTTGCGGTCCTT ATAGGTTCGTCTACCGGAGGTCCTTCATCTCTTGAACAGGTGATCCCAAGGCTTCCGGGTGACCTGCCTGCTCCGGTCTT TGTTGTCCAGCATATGCCAGAAGGCAATTTTTGCAAACAACTTGCAGAGAGGCTGAATTTCCTTTCAGAGCTGGAAATAA AGGAAGCCAGAAATAATGAAAAAGTAACTGCTGGTGTTGTTTACATAGCCCCCGGCGGCTATCACATGACTGTTAAAAAG GCTCTGGGTGTAACCAGAATAAAGCTCATAAAAAGCCAGCCTGTTCATGCGGTAATGCCTGCAGTTGATGTGATAGCTGA AAGCATGCTGGACGTTTACGGAAAGAACATAGTCGCTGCAATTCTTACGGGAATGGGGTTTGATGGGGCTGCCGGATTTA AAAAGATAAGGGATGCAGGCGGCTCCACAATTGCATGCAGTGAAGATACCTGCGTTATTTTCGGAATGCCAAAAGCTGCA ATAGCAGCCGGCGGTATTGATACGGTAAAACCCATTTTTGAGATCCCTGAAGAAATAGTAAGGATGTCGGAGGTGAAATG CAATGGAAAGTGA
Upstream 100 bases:
>100_bases ATAAAACTGGGGGCAAGAGGTTACATCATAAAACCTTTCCAGGCCCCCAAGGTCATTGAAGAGATTAAGAAAGTAGTCGG TGAATGAATTCGGGGATAGT
Downstream 100 bases:
>100_bases TATGGCAGCCTATAAAAGCGATTTCCTTCAGGAAGTATACGAGTGCCTTGATATATTCAACCAGTCTTTTGTGGACCTGG AAAATGGGGACACTGCTGCA
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MIRTLIVDDSAFMRMAIRSMLASSPDIKIAGDACNGKEAVDKSKSLHPDIIIMDVNMPVMDGLTAVKTIMSTDPVPIIMF STLTVEGSKEALEALQLGAIDFVPKSESHHDVNKIEKELVDKIRNIHSSNPSILRLINMRKFKGEVVRGKWSCAGDFAVL IGSSTGGPSSLEQVIPRLPGDLPAPVFVVQHMPEGNFCKQLAERLNFLSELEIKEARNNEKVTAGVVYIAPGGYHMTVKK ALGVTRIKLIKSQPVHAVMPAVDVIAESMLDVYGKNIVAAILTGMGFDGAAGFKKIRDAGGSTIACSEDTCVIFGMPKAA IAAGGIDTVKPIFEIPEEIVRMSEVKCNGK
Sequences:
>Translated_350_residues MIRTLIVDDSAFMRMAIRSMLASSPDIKIAGDACNGKEAVDKSKSLHPDIIIMDVNMPVMDGLTAVKTIMSTDPVPIIMF STLTVEGSKEALEALQLGAIDFVPKSESHHDVNKIEKELVDKIRNIHSSNPSILRLINMRKFKGEVVRGKWSCAGDFAVL IGSSTGGPSSLEQVIPRLPGDLPAPVFVVQHMPEGNFCKQLAERLNFLSELEIKEARNNEKVTAGVVYIAPGGYHMTVKK ALGVTRIKLIKSQPVHAVMPAVDVIAESMLDVYGKNIVAAILTGMGFDGAAGFKKIRDAGGSTIACSEDTCVIFGMPKAA IAAGGIDTVKPIFEIPEEIVRMSEVKCNGK >Mature_350_residues MIRTLIVDDSAFMRMAIRSMLASSPDIKIAGDACNGKEAVDKSKSLHPDIIIMDVNMPVMDGLTAVKTIMSTDPVPIIMF STLTVEGSKEALEALQLGAIDFVPKSESHHDVNKIEKELVDKIRNIHSSNPSILRLINMRKFKGEVVRGKWSCAGDFAVL IGSSTGGPSSLEQVIPRLPGDLPAPVFVVQHMPEGNFCKQLAERLNFLSELEIKEARNNEKVTAGVVYIAPGGYHMTVKK ALGVTRIKLIKSQPVHAVMPAVDVIAESMLDVYGKNIVAAILTGMGFDGAAGFKKIRDAGGSTIACSEDTCVIFGMPKAA IAAGGIDTVKPIFEIPEEIVRMSEVKCNGK
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=341, Percent_Identity=35.7771260997067, Blast_Score=207, Evalue=6e-55, Organism=Escherichia coli, GI1788222, Length=134, Percent_Identity=33.5820895522388, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB1_METMA (Q8Q009)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632353.2 - ProteinModelPortal: Q8Q009 - SMR: Q8Q009 - GeneID: 1478671 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0329 - NMPDR: fig|192952.1.peg.329 - HOGENOM: HBG705324 - OMA: CLVYGMA - ProtClustDB: PRK00742 - BioCyc: MMAZ192952:MM0329-MONOMER - BRENDA: 3.1.1.61 - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 37645; Mature: 37645
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 171-171 ACT_SITE 198-198 ACT_SITE 295-295
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTLIVDDSAFMRMAIRSMLASSPDIKIAGDACNGKEAVDKSKSLHPDIIIMDVNMPVM CEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCHH DGLTAVKTIMSTDPVPIIMFSTLTVEGSKEALEALQLGAIDFVPKSESHHDVNKIEKELV HHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHH DKIRNIHSSNPSILRLINMRKFKGEVVRGKWSCAGDFAVLIGSSTGGPSSLEQVIPRLPG HHHHHHCCCCCCEEHHHHHHHHCCCEEECEECCCCCEEEEEECCCCCHHHHHHHHHHCCC DLPAPVFVVQHMPEGNFCKQLAERLNFLSELEIKEARNNEKVTAGVVYIAPGGYHMTVKK CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHH ALGVTRIKLIKSQPVHAVMPAVDVIAESMLDVYGKNIVAAILTGMGFDGAAGFKKIRDAG HHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GSTIACSEDTCVIFGMPKAAIAAGGIDTVKPIFEIPEEIVRMSEVKCNGK CCEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCC >Mature Secondary Structure MIRTLIVDDSAFMRMAIRSMLASSPDIKIAGDACNGKEAVDKSKSLHPDIIIMDVNMPVM CEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCHH DGLTAVKTIMSTDPVPIIMFSTLTVEGSKEALEALQLGAIDFVPKSESHHDVNKIEKELV HHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHH DKIRNIHSSNPSILRLINMRKFKGEVVRGKWSCAGDFAVLIGSSTGGPSSLEQVIPRLPG HHHHHHCCCCCCEEHHHHHHHHCCCEEECEECCCCCEEEEEECCCCCHHHHHHHHHHCCC DLPAPVFVVQHMPEGNFCKQLAERLNFLSELEIKEARNNEKVTAGVVYIAPGGYHMTVKK CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHH ALGVTRIKLIKSQPVHAVMPAVDVIAESMLDVYGKNIVAAILTGMGFDGAAGFKKIRDAG HHCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GSTIACSEDTCVIFGMPKAAIAAGGIDTVKPIFEIPEEIVRMSEVKCNGK CCEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824