| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is cheA [H]
Identifier: 21226430
GI number: 21226430
Start: 432728
End: 435373
Strand: Reverse
Name: cheA [H]
Synonym: MM_0328
Alternate gene names: 21226430
Gene position: 435373-432728 (Counterclockwise)
Preceding gene: 161485682
Following gene: 21226429
Centisome position: 10.63
GC content: 43.12
Gene sequence:
>2646_bases ATGGAAAGTGATATGGCAGCCTATAAAAGCGATTTCCTTCAGGAAGTATACGAGTGCCTTGATATATTCAACCAGTCTTT TGTGGACCTGGAAAATGGGGACACTGCTGCAATTGATGAAATCTTCAGGATAACCCATACAATAAAAGGAATGGCTGGAT TTCTCGGCTATGCTTCACTCGAACATCTGTGCCATACCATGGAAGAAGTCCTCTGCGGCATAAAAAATGGAGATATAGAG ATAGATGGCGAACTTGTTGATATCCTGCTTTCAACAGTCGACCGGATCACGGATATTGTCAAACAGATCGAGAATGCGGA TAACGATAATGTAAAAATTGACGACCTGGTAGAAGCTTTTGAAAATTATGATAAAATAAAGAACGGAGAACATGAATCTC TCTGCCCTTTATCCGCAGACAACAGTGTCCCATCTCCTGCAATAGAATCCTCACAGAATTCGGAGAAAAATATTTCTCCG AGTCCGGAATATCAGAAGGATAAAGCCGAAAACAGAGGGACATGCAGTACGGATGGCTGCAACCTTATGAACAGAGGAAC ATGCAGTACGGATGAGTGCAACCTTGTTCTTGATGTAACCCTTGTTAAGGATTGTGCCATGAAAGGTCTGAGAGCATCGT TGATTATAGAGTCTCTCAAAGATATCAGTAAACTGGCTAAAACAGAGCCTGATGAAAACGACATGGAGAACGGCTTTGAC GGTTGCTTTAAAGTATTCCTTTCAGGGGACAGCAGTAAGGTAGAAGAACTGATGGATAGAATTTCAGAAATCGAACAATT TAATATTTCTGAAATTAAACCGCTTAATGGTGCCTCTGATAAAGAAATAAAACGTAATAATTCTATTTCGGAGAAGTCTC AGCCGGATGTCATATCAACTACCATTCTGCCGTCTGAAACCCTTTCCGTTCCTTCTGATACAACGTCTGTTTCGGAGGTG AACAGCAGAAATTCACTCCACTCATACATATACGGTTTAATAGCAAGGATGCACCGCATTCTGGACGGAATTGGTAAATC CGTAAACTGTTTTAAAAAGACCGAATCCGCCGGAGTGCTCCTGAAGAAAAAATGTAAGGATTCCAGGGGAGATATTCCGG AGCAGCAGGAAACTCTAGAGCAACAGGAAACTCTAGAGCAGCAGAAAACTCCAGCTTCCGAACTGGATATTGAACTGGGT CCTGCAGTTTCCGATCAAAAGCTGCAGATAGAAGAATTCGGGATTCCTGATCATGTTCCAGAAAAGGTTTCTGAGGAGGA TCTTCCGGACTGGAACATCTCGGACAGGATCATTGATGGTCTGGAGATAAAGCCGGATAAATTCCAATCTCCTGCAGAAA ATATTAACGGCTCTTCTCCTCAGTTACTGGAGTTATGCGAAGCTTCCGGGACTGAAGAATCCGAACCGGGTTCAAACAAC CACCTCTCCGAATCAGAATCCTCCACAAAAGCGATGTTTGACCCAAAAAGGCAGGAAACCATCCGTGTCAGGACCTCCAA TCTGGATAATATAATGAATCTTGTGGGTGAGCTCGTCATAAACAAAGGGCGCCTGCTCCAGATATCCCAGCAGTACAACC TGCCTGAACTTGGGGAGGCAACCGGGACTCTGGACAAATCGATTTCGAGCCTTCAGGATGAGGTAATGAGAATAAGGATG GTAAAAATTGAGAGGGTCTTCAGCAAGTTTCCGCGTATGGTAAGAGACCTGAGCAGGAAATTCAACAAAAATATCGAGTT TGAAATTGAAGGTCAGGATACGGAACTTGACAGGACTATTCTGGATGATATCAGTGATCCTCTGGTTCACCTTGTAAGAA ACTCGGTTGACCACGGTATTGAACTCCCTGAAGAGCGTTCAAAAGCCGGAAAAAGTGAAGTCGGGCAAATAAAGCTCTCT GCAAGAAGAGAGAAAAACAACGTAATCATCGAGATAGAAGACGACGGCAGAGGCATAGATGTTGAAGTAATAAAGAAGAA GGCTGTTGAGAAAGGACTATTGTCTTCATTTGATGTGGAGAGCCTGAGCGAAGAAGAAGTCAGGATGCTGATCTTTGCTC CGGGGTTTTCAACAAAGGACGTCCCGACAGAGATCTCAGGCAGGGGCGTGGGTATGGACGCAGTAAAAACTGCTGTTGAA AAACTTGGTGGAAAGGTCAGGATATATTCAAAGAAAGGGGAATTTACAAAAATCAGAATTGACCTGCCTCCAACAGTTGC TATAATCAAATCCCTGCTTGTAGATGTCGGTCCCGAGACCTATGCTATTCCTATCTCCAATGTTGTGAAAGCTTTGAGCG TCGGCAGCAGTGATTATAAACTCATTAAAGAAACCCCCCTGCTCTATATCAGGGATAAATTGATACCGATTCTCGAATTG AAAGAATTCTTCGATATCGAATGCGAAAAACCCGACCGGCAGATTGCCATAATCGTTGAAAAAGAAAACGAGGAAGTTGG CCTGATAGTTGATTCTATCATTGACCAGCAGGAAATTGTCATTAAACCACTCGGAAATGTTTTATCGAACTCAAAAGGAT TCATCGGTGCCACCATACTGGGAGATGGGCGTGTGATACCGATTATAGATGTTTCAATGCTTATAAAAGGTGATATTGAT GACTGA
Upstream 100 bases:
>100_bases GGAATGCCAAAAGCTGCAATAGCAGCCGGCGGTATTGATACGGTAAAACCCATTTTTGAGATCCCTGAAGAAATAGTAAG GATGTCGGAGGTGAAATGCA
Downstream 100 bases:
>100_bases TCTGGATAAGCTTGGTGAAGAGGAAATGGATGTTTTGAAGGAACTCGGCAATATCGGAACCGGACACGCTGCAACATCTC TTTCCAAGCTGCTTAATAAA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 881; Mature: 881
Protein sequence:
>881_residues MESDMAAYKSDFLQEVYECLDIFNQSFVDLENGDTAAIDEIFRITHTIKGMAGFLGYASLEHLCHTMEEVLCGIKNGDIE IDGELVDILLSTVDRITDIVKQIENADNDNVKIDDLVEAFENYDKIKNGEHESLCPLSADNSVPSPAIESSQNSEKNISP SPEYQKDKAENRGTCSTDGCNLMNRGTCSTDECNLVLDVTLVKDCAMKGLRASLIIESLKDISKLAKTEPDENDMENGFD GCFKVFLSGDSSKVEELMDRISEIEQFNISEIKPLNGASDKEIKRNNSISEKSQPDVISTTILPSETLSVPSDTTSVSEV NSRNSLHSYIYGLIARMHRILDGIGKSVNCFKKTESAGVLLKKKCKDSRGDIPEQQETLEQQETLEQQKTPASELDIELG PAVSDQKLQIEEFGIPDHVPEKVSEEDLPDWNISDRIIDGLEIKPDKFQSPAENINGSSPQLLELCEASGTEESEPGSNN HLSESESSTKAMFDPKRQETIRVRTSNLDNIMNLVGELVINKGRLLQISQQYNLPELGEATGTLDKSISSLQDEVMRIRM VKIERVFSKFPRMVRDLSRKFNKNIEFEIEGQDTELDRTILDDISDPLVHLVRNSVDHGIELPEERSKAGKSEVGQIKLS ARREKNNVIIEIEDDGRGIDVEVIKKKAVEKGLLSSFDVESLSEEEVRMLIFAPGFSTKDVPTEISGRGVGMDAVKTAVE KLGGKVRIYSKKGEFTKIRIDLPPTVAIIKSLLVDVGPETYAIPISNVVKALSVGSSDYKLIKETPLLYIRDKLIPILEL KEFFDIECEKPDRQIAIIVEKENEEVGLIVDSIIDQQEIVIKPLGNVLSNSKGFIGATILGDGRVIPIIDVSMLIKGDID D
Sequences:
>Translated_881_residues MESDMAAYKSDFLQEVYECLDIFNQSFVDLENGDTAAIDEIFRITHTIKGMAGFLGYASLEHLCHTMEEVLCGIKNGDIE IDGELVDILLSTVDRITDIVKQIENADNDNVKIDDLVEAFENYDKIKNGEHESLCPLSADNSVPSPAIESSQNSEKNISP SPEYQKDKAENRGTCSTDGCNLMNRGTCSTDECNLVLDVTLVKDCAMKGLRASLIIESLKDISKLAKTEPDENDMENGFD GCFKVFLSGDSSKVEELMDRISEIEQFNISEIKPLNGASDKEIKRNNSISEKSQPDVISTTILPSETLSVPSDTTSVSEV NSRNSLHSYIYGLIARMHRILDGIGKSVNCFKKTESAGVLLKKKCKDSRGDIPEQQETLEQQETLEQQKTPASELDIELG PAVSDQKLQIEEFGIPDHVPEKVSEEDLPDWNISDRIIDGLEIKPDKFQSPAENINGSSPQLLELCEASGTEESEPGSNN HLSESESSTKAMFDPKRQETIRVRTSNLDNIMNLVGELVINKGRLLQISQQYNLPELGEATGTLDKSISSLQDEVMRIRM VKIERVFSKFPRMVRDLSRKFNKNIEFEIEGQDTELDRTILDDISDPLVHLVRNSVDHGIELPEERSKAGKSEVGQIKLS ARREKNNVIIEIEDDGRGIDVEVIKKKAVEKGLLSSFDVESLSEEEVRMLIFAPGFSTKDVPTEISGRGVGMDAVKTAVE KLGGKVRIYSKKGEFTKIRIDLPPTVAIIKSLLVDVGPETYAIPISNVVKALSVGSSDYKLIKETPLLYIRDKLIPILEL KEFFDIECEKPDRQIAIIVEKENEEVGLIVDSIIDQQEIVIKPLGNVLSNSKGFIGATILGDGRVIPIIDVSMLIKGDID D >Mature_881_residues MESDMAAYKSDFLQEVYECLDIFNQSFVDLENGDTAAIDEIFRITHTIKGMAGFLGYASLEHLCHTMEEVLCGIKNGDIE IDGELVDILLSTVDRITDIVKQIENADNDNVKIDDLVEAFENYDKIKNGEHESLCPLSADNSVPSPAIESSQNSEKNISP SPEYQKDKAENRGTCSTDGCNLMNRGTCSTDECNLVLDVTLVKDCAMKGLRASLIIESLKDISKLAKTEPDENDMENGFD GCFKVFLSGDSSKVEELMDRISEIEQFNISEIKPLNGASDKEIKRNNSISEKSQPDVISTTILPSETLSVPSDTTSVSEV NSRNSLHSYIYGLIARMHRILDGIGKSVNCFKKTESAGVLLKKKCKDSRGDIPEQQETLEQQETLEQQKTPASELDIELG PAVSDQKLQIEEFGIPDHVPEKVSEEDLPDWNISDRIIDGLEIKPDKFQSPAENINGSSPQLLELCEASGTEESEPGSNN HLSESESSTKAMFDPKRQETIRVRTSNLDNIMNLVGELVINKGRLLQISQQYNLPELGEATGTLDKSISSLQDEVMRIRM VKIERVFSKFPRMVRDLSRKFNKNIEFEIEGQDTELDRTILDDISDPLVHLVRNSVDHGIELPEERSKAGKSEVGQIKLS ARREKNNVIIEIEDDGRGIDVEVIKKKAVEKGLLSSFDVESLSEEEVRMLIFAPGFSTKDVPTEISGRGVGMDAVKTAVE KLGGKVRIYSKKGEFTKIRIDLPPTVAIIKSLLVDVGPETYAIPISNVVKALSVGSSDYKLIKETPLLYIRDKLIPILEL KEFFDIECEKPDRQIAIIVEKENEEVGLIVDSIIDQQEIVIKPLGNVLSNSKGFIGATILGDGRVIPIIDVSMLIKGDID D
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=381, Percent_Identity=43.8320209973753, Blast_Score=301, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 97770; Mature: 97770
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDMAAYKSDFLQEVYECLDIFNQSFVDLENGDTAAIDEIFRITHTIKGMAGFLGYASL CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EHLCHTMEEVLCGIKNGDIEIDGELVDILLSTVDRITDIVKQIENADNDNVKIDDLVEAF HHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH ENYDKIKNGEHESLCPLSADNSVPSPAIESSQNSEKNISPSPEYQKDKAENRGTCSTDGC HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC NLMNRGTCSTDECNLVLDVTLVKDCAMKGLRASLIIESLKDISKLAKTEPDENDMENGFD CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GCFKVFLSGDSSKVEELMDRISEIEQFNISEIKPLNGASDKEIKRNNSISEKSQPDVIST HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCCCCCCCCCCEEEE TILPSETLSVPSDTTSVSEVNSRNSLHSYIYGLIARMHRILDGIGKSVNCFKKTESAGVL EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHH LKKKCKDSRGDIPEQQETLEQQETLEQQKTPASELDIELGPAVSDQKLQIEEFGIPDHVP HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCEEHHHCCCCCCCC EKVSEEDLPDWNISDRIIDGLEIKPDKFQSPAENINGSSPQLLELCEASGTEESEPGSNN HHCCCCCCCCCCCHHHHHCCCCCCCHHCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCC HLSESESSTKAMFDPKRQETIRVRTSNLDNIMNLVGELVINKGRLLQISQQYNLPELGEA CCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH TGTLDKSISSLQDEVMRIRMVKIERVFSKFPRMVRDLSRKFNKNIEFEIEGQDTELDRTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH LDDISDPLVHLVRNSVDHGIELPEERSKAGKSEVGQIKLSARREKNNVIIEIEDDGRGID HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHCEEEEEEECCCCCEEEEECCCCCCCH VEVIKKKAVEKGLLSSFDVESLSEEEVRMLIFAPGFSTKDVPTEISGRGVGMDAVKTAVE HHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH KLGGKVRIYSKKGEFTKIRIDLPPTVAIIKSLLVDVGPETYAIPISNVVKALSVGSSDYK HCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCH LIKETPLLYIRDKLIPILELKEFFDIECEKPDRQIAIIVEKENEEVGLIVDSIIDQQEIV HHHCCCEEEEHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHH IKPLGNVLSNSKGFIGATILGDGRVIPIIDVSMLIKGDIDD HHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEHEECCCCC >Mature Secondary Structure MESDMAAYKSDFLQEVYECLDIFNQSFVDLENGDTAAIDEIFRITHTIKGMAGFLGYASL CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EHLCHTMEEVLCGIKNGDIEIDGELVDILLSTVDRITDIVKQIENADNDNVKIDDLVEAF HHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH ENYDKIKNGEHESLCPLSADNSVPSPAIESSQNSEKNISPSPEYQKDKAENRGTCSTDGC HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC NLMNRGTCSTDECNLVLDVTLVKDCAMKGLRASLIIESLKDISKLAKTEPDENDMENGFD CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GCFKVFLSGDSSKVEELMDRISEIEQFNISEIKPLNGASDKEIKRNNSISEKSQPDVIST HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHCCCCCCCCCCCEEEE TILPSETLSVPSDTTSVSEVNSRNSLHSYIYGLIARMHRILDGIGKSVNCFKKTESAGVL EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHH LKKKCKDSRGDIPEQQETLEQQETLEQQKTPASELDIELGPAVSDQKLQIEEFGIPDHVP HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCCEEHHHCCCCCCCC EKVSEEDLPDWNISDRIIDGLEIKPDKFQSPAENINGSSPQLLELCEASGTEESEPGSNN HHCCCCCCCCCCCHHHHHCCCCCCCHHCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCC HLSESESSTKAMFDPKRQETIRVRTSNLDNIMNLVGELVINKGRLLQISQQYNLPELGEA CCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH TGTLDKSISSLQDEVMRIRMVKIERVFSKFPRMVRDLSRKFNKNIEFEIEGQDTELDRTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH LDDISDPLVHLVRNSVDHGIELPEERSKAGKSEVGQIKLSARREKNNVIIEIEDDGRGID HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHCEEEEEEECCCCCEEEEECCCCCCCH VEVIKKKAVEKGLLSSFDVESLSEEEVRMLIFAPGFSTKDVPTEISGRGVGMDAVKTAVE HHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH KLGGKVRIYSKKGEFTKIRIDLPPTVAIIKSLLVDVGPETYAIPISNVVKALSVGSSDYK HCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCH LIKETPLLYIRDKLIPILELKEFFDIECEKPDRQIAIIVEKENEEVGLIVDSIIDQQEIV HHHCCCEEEEHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHH IKPLGNVLSNSKGFIGATILGDGRVIPIIDVSMLIKGDIDD HHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9989504 [H]