Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is cheY [H]
Identifier: 21226432
GI number: 21226432
Start: 436429
End: 436791
Strand: Reverse
Name: cheY [H]
Synonym: MM_0330
Alternate gene names: 21226432
Gene position: 436791-436429 (Counterclockwise)
Preceding gene: 21226433
Following gene: 161485682
Centisome position: 10.66
GC content: 42.42
Gene sequence:
>363_bases ATGGCAAAAGTATTGATTGTTGATGATACCGCTTTTATGAGAAAACTTCTGAAAAACATTCTTTTCGGTGCAGGGTTCGA CATCGCAGGGGAGGCTGAAAACGGAAAGCAGGCTGTGGAAATGTACAGGACAATAAAGCCGGATGTTGTTACCATGGATG TTGTCATGCCGGAAATGACCGGAATTGACGCATTAAAACAGATTAAGACTGCTGACAAAGATGCTAAAATCGTGATGTGC ACTGCCATCGGTCAGGAAAATATTGTAAAAACAGCCATAAAACTGGGGGCAAGAGGTTACATCATAAAACCTTTCCAGGC CCCCAAGGTCATTGAAGAGATTAAGAAAGTAGTCGGTGAATGA
Upstream 100 bases:
>100_bases GTTGTAAAAATCAGAAAAGAAATTGAACTGACTCCTCATGGGGTAAGTATGGTAGATAAAATTTCTAAAAGATAATTTCA GATAATTTTGGGGGATATAT
Downstream 100 bases:
>100_bases ATTCGGGGATAGTATGATTCGTACTCTTATTGTTGATGATTCTGCCTTCATGCGGATGGCAATAAGAAGCATGCTTGCCA GCAGCCCGGATATAAAGATA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMC TAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE
Sequences:
>Translated_120_residues MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMC TAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE >Mature_119_residues AKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMCT AIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=103, Percent_Identity=37.8640776699029, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=34.1880341880342, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1788222, Length=118, Percent_Identity=34.7457627118644, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=32.2033898305085, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=31.304347826087, Blast_Score=61, Evalue=3e-11, Organism=Escherichia coli, GI1790437, Length=102, Percent_Identity=37.2549019607843, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=29.9145299145299, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13141; Mature: 13010
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMT CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC GIDALKQIKTADKDAKIVMCTAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure AKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMT CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC GIDALKQIKTADKDAKIVMCTAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9521117 [H]