Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is cheY [H]

Identifier: 21226432

GI number: 21226432

Start: 436429

End: 436791

Strand: Reverse

Name: cheY [H]

Synonym: MM_0330

Alternate gene names: 21226432

Gene position: 436791-436429 (Counterclockwise)

Preceding gene: 21226433

Following gene: 161485682

Centisome position: 10.66

GC content: 42.42

Gene sequence:

>363_bases
ATGGCAAAAGTATTGATTGTTGATGATACCGCTTTTATGAGAAAACTTCTGAAAAACATTCTTTTCGGTGCAGGGTTCGA
CATCGCAGGGGAGGCTGAAAACGGAAAGCAGGCTGTGGAAATGTACAGGACAATAAAGCCGGATGTTGTTACCATGGATG
TTGTCATGCCGGAAATGACCGGAATTGACGCATTAAAACAGATTAAGACTGCTGACAAAGATGCTAAAATCGTGATGTGC
ACTGCCATCGGTCAGGAAAATATTGTAAAAACAGCCATAAAACTGGGGGCAAGAGGTTACATCATAAAACCTTTCCAGGC
CCCCAAGGTCATTGAAGAGATTAAGAAAGTAGTCGGTGAATGA

Upstream 100 bases:

>100_bases
GTTGTAAAAATCAGAAAAGAAATTGAACTGACTCCTCATGGGGTAAGTATGGTAGATAAAATTTCTAAAAGATAATTTCA
GATAATTTTGGGGGATATAT

Downstream 100 bases:

>100_bases
ATTCGGGGATAGTATGATTCGTACTCTTATTGTTGATGATTCTGCCTTCATGCGGATGGCAATAAGAAGCATGCTTGCCA
GCAGCCCGGATATAAAGATA

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMC
TAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE

Sequences:

>Translated_120_residues
MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMC
TAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE
>Mature_119_residues
AKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMTGIDALKQIKTADKDAKIVMCT
AIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE

Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=103, Percent_Identity=37.8640776699029, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=34.1880341880342, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1788222, Length=118, Percent_Identity=34.7457627118644, Blast_Score=66, Evalue=6e-13,
Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=32.2033898305085, Blast_Score=63, Evalue=5e-12,
Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=31.304347826087, Blast_Score=61, Evalue=3e-11,
Organism=Escherichia coli, GI1790437, Length=102, Percent_Identity=37.2549019607843, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=29.9145299145299, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13141; Mature: 13010

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMT
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
GIDALKQIKTADKDAKIVMCTAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE
CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AKVLIVDDTAFMRKLLKNILFGAGFDIAGEAENGKQAVEMYRTIKPDVVTMDVVMPEMT
CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
GIDALKQIKTADKDAKIVMCTAIGQENIVKTAIKLGARGYIIKPFQAPKVIEEIKKVVGE
CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550470; 10360571; 9521117 [H]