| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is fae-hps [H]
Identifier: 20094711
GI number: 20094711
Start: 1271731
End: 1272240
Strand: Reverse
Name: fae-hps [H]
Synonym: MK1275
Alternate gene names: 20094711
Gene position: 1272240-1271731 (Counterclockwise)
Preceding gene: 20094712
Following gene: 20094710
Centisome position: 75.06
GC content: 63.33
Gene sequence:
>510_bases ATGCCGTTCGCGTTACGCGTCGGGGAGGCCTTCGTAGGCGAGCCGGATGAACCCGAGATAGCACACATCGACCTGGTCAT GGGGTCCGTGGAAGGTCCGGTCGGTCGAGCGTTCGCCGAGGCCCTCGCGAGTCCCTCCAAGGGACACACGCCGCTCCTCG CCGTCCTGACGCCCGGAGTCGCCGTCCGACCGCCCACACTGATCACACCCACGGTCACCATCGAGAACATGGCCCAGGGG GAGAAGATCTTCGGTCCTGTGCAGCGGGGGATCGCGGAGGCGGTCGTCGAGTCCGTGGAGGAGGGGATAATCCCCCGCGA CATCGTCGACGACGTGGTCATAATAGCGAACACCTTCGTGCACCCGGAGGCCGAGGACGATCGTCGGCTCTACGAGAACA ACAAGGAGGCCATGAAGAAAGCTATCGAGTGCGCCATGAAGGGTGAGCCGACCATCGACGAACTGATCGAGAAGAAAGAC GAGGTCGAGCACCCGCTCGCCAAGTTCTGA
Upstream 100 bases:
>100_bases CGCTCGGCGCGGCGATCGGTATTTCTTTAGCCCTTTTGATTCTCGCTGAAGTTAAGGTGCACTTATACTATGGACGAGCT GAAGTACGAGGGCGATCCCT
Downstream 100 bases:
>100_bases CCGCTCGAGGGCATCTCCGTGGTACACACAGGAACGTCCCGACGCGCCCTCTCGGTATCCCCTTTCTCTCTCGACTACCG TGACGATTTCCGGGCGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQG EKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKD EVEHPLAKF
Sequences:
>Translated_169_residues MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQG EKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKD EVEHPLAKF >Mature_168_residues PFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQGE KIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDE VEHPLAKF
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]
COG id: COG1795
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR000056 - InterPro: IPR011060 [H]
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 18286; Mature: 18155
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGV CCCEEECCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCC AVRPPTLITPTVTIENMAQGEKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFV EECCCCEECCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDEVEHPLAKF CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCC >Mature Secondary Structure PFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGV CCEEECCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCC AVRPPTLITPTVTIENMAQGEKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFV EECCCCEECCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDEVEHPLAKF CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA