| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094712
Identifier: 20094712
GI number: 20094712
Start: 1272292
End: 1273644
Strand: Reverse
Name: 20094712
Synonym: MK1276
Alternate gene names: NA
Gene position: 1273644-1272292 (Counterclockwise)
Preceding gene: 20094714
Following gene: 20094711
Centisome position: 75.14
GC content: 70.21
Gene sequence:
>1353_bases GTGGTCGCGACGGTCCGGCCAGTCCGCGCGCTCCCGGGTTCCTCCACGTGGGTGAGGCTCTCCTCGGAGTGCATCGTCGT GCGCGGGCCGGACGGGACGGTCCGGGTACGTCCGGAGGACGTCGTGAGCGTGAAGGAGCACCGCTCGTCCCGCCCGCGGA TGGACCCGGACGAGGAGGTGCGGCTGGTCCTGATCACCCGGGACCTGGAGCACGTCGTGCTCCCGTTCCGCAGCCGGAAG CTGTACCGCGGTGTCAAGGCGATCCTGGCCGCCCGGGACGGGGACGTGGACCGGCTGCTCAGACACCTGCGGAGGGTCCT GAGGAAGGAGCGGAAGCCTCCCCTCTTCGAGCGTCGTGAGGACGGGGTCTGGCTGCGCTGGCCGTGGTTGGAGGTGCGGG TGGGTCCGCCCGAACGGGCCCGTCGGGTGGTCCGGGAGCTCCTGGAGTACTGGCTGAGGCTGCTGAAGGAGAGCGGTCGG GACCCGGAGGACGTCAGCCCGCGGAAGGTGGGCCTGTCGGTCGTGCTGGGTTCACTCTCCATACTATTTGGTGGTGGGAA GGGGAAGAAGGGCGCGGCCGGGGCCAAGGTCAAGGCCGGCGCGAAGGGCGACGCGGGCGGGAAGACTGGTGGGACGGCGC TGGCCAAGGCCTCGAAGAAGCTGTTGCTCAAGATGATCAAGGCGCTCATGAAGCTCGGTGTGAAGGTGACCTTCTGGACC CTGGTCGCGTTCGTCGTCGCGGTCGCCCTGGTCCCGCTGGCCGTCATGTCGGTCGTGTACTGGCTGATCGCGCGCCGCGC CTACCGGTGGGGATCGGTCCCCTGGCTGCGCGGGCTGGTCCTCCTGCAGCTGCAGGGTTTCGCCGTCCTCACCGGTTTCT GGTGCCTGTTCGCGCCCTTGCCGGTCCTCTTCGGGCACTTCCTGGCCGGCCCGTTCGTGGTCGCCGGGGCCGCGGCCCTC GTCCCGCCCTCGCTCCTGCTCGTCCGGGCGTACCGTCGGGAGCCCCTCCGGTTCCCCGTCGCCGTACACACGACGGGATC CGACGTCACGAGGCCCCTGACACTGGCGGGGGTTGGCCGGGCTGGTGGTGGCGCTGTTCGTGGGGCTCGGCTGGGACGTC CTGTACGGCGAGGCGGTCGGCGTCCTCTCGCTGGCGCTCGTCTCCGTCGGACGGGTCCTGACGACCCTGCGCGCGTCGAG GCTGGCCCGGCGCCTGTGGCTGCCCCCGGAGGTCGTCCCGATCGGATGAACGGCCTAGATCGGTCGGTAGGGTGGGGGAC GTGGACCGAGCCGGTAACTCAACTCGCTCGGCGCGGCGATCGGTATTTCTTTAGCCCTTTTGATTCTCGCTGA
Upstream 100 bases:
>100_bases TCTTGGGAACGCGCTTCCGGGATCGACGTTCTACCGCCCTCGTCGCGCCCGTCGTGTCGTCCGGCGTCGCGGGTCGAGGC CGATCCCCCGACCCGCTGGG
Downstream 100 bases:
>100_bases AGTTAAGGTGCACTTATACTATGGACGAGCTGAAGTACGAGGGCGATCCCTATGCCGTTCGCGTTACGCGTCGGGGAGGC CTTCGTAGGCGAGCCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR
Sequences:
>Translated_450_residues MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR >Mature_450_residues MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49460; Mature: 49460
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEV CCCCCCCHHCCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCE RLVLITRDLEHVVLPFRSRKLYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERRE EEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC DGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGRDPEDVSPRKVGLSVVLGSLS CCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT HEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH PVLFGHFLAGPFVVAGAAALVPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGR HHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCC AGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVEAGPAPVAAPGGRPDRMNGLD CCCCCCCHHHCCCHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCC RSVGWGTWTEPVTQLARRGDRYFFSPFDSR CCCCCCCHHHHHHHHHHCCCCEEECCCCCC >Mature Secondary Structure MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEV CCCCCCCHHCCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCE RLVLITRDLEHVVLPFRSRKLYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERRE EEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC DGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGRDPEDVSPRKVGLSVVLGSLS CCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT HEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH PVLFGHFLAGPFVVAGAAALVPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGR HHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCC AGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVEAGPAPVAAPGGRPDRMNGLD CCCCCCCHHHCCCHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCC RSVGWGTWTEPVTQLARRGDRYFFSPFDSR CCCCCCCHHHHHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA