Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094712

Identifier: 20094712

GI number: 20094712

Start: 1272292

End: 1273644

Strand: Reverse

Name: 20094712

Synonym: MK1276

Alternate gene names: NA

Gene position: 1273644-1272292 (Counterclockwise)

Preceding gene: 20094714

Following gene: 20094711

Centisome position: 75.14

GC content: 70.21

Gene sequence:

>1353_bases
GTGGTCGCGACGGTCCGGCCAGTCCGCGCGCTCCCGGGTTCCTCCACGTGGGTGAGGCTCTCCTCGGAGTGCATCGTCGT
GCGCGGGCCGGACGGGACGGTCCGGGTACGTCCGGAGGACGTCGTGAGCGTGAAGGAGCACCGCTCGTCCCGCCCGCGGA
TGGACCCGGACGAGGAGGTGCGGCTGGTCCTGATCACCCGGGACCTGGAGCACGTCGTGCTCCCGTTCCGCAGCCGGAAG
CTGTACCGCGGTGTCAAGGCGATCCTGGCCGCCCGGGACGGGGACGTGGACCGGCTGCTCAGACACCTGCGGAGGGTCCT
GAGGAAGGAGCGGAAGCCTCCCCTCTTCGAGCGTCGTGAGGACGGGGTCTGGCTGCGCTGGCCGTGGTTGGAGGTGCGGG
TGGGTCCGCCCGAACGGGCCCGTCGGGTGGTCCGGGAGCTCCTGGAGTACTGGCTGAGGCTGCTGAAGGAGAGCGGTCGG
GACCCGGAGGACGTCAGCCCGCGGAAGGTGGGCCTGTCGGTCGTGCTGGGTTCACTCTCCATACTATTTGGTGGTGGGAA
GGGGAAGAAGGGCGCGGCCGGGGCCAAGGTCAAGGCCGGCGCGAAGGGCGACGCGGGCGGGAAGACTGGTGGGACGGCGC
TGGCCAAGGCCTCGAAGAAGCTGTTGCTCAAGATGATCAAGGCGCTCATGAAGCTCGGTGTGAAGGTGACCTTCTGGACC
CTGGTCGCGTTCGTCGTCGCGGTCGCCCTGGTCCCGCTGGCCGTCATGTCGGTCGTGTACTGGCTGATCGCGCGCCGCGC
CTACCGGTGGGGATCGGTCCCCTGGCTGCGCGGGCTGGTCCTCCTGCAGCTGCAGGGTTTCGCCGTCCTCACCGGTTTCT
GGTGCCTGTTCGCGCCCTTGCCGGTCCTCTTCGGGCACTTCCTGGCCGGCCCGTTCGTGGTCGCCGGGGCCGCGGCCCTC
GTCCCGCCCTCGCTCCTGCTCGTCCGGGCGTACCGTCGGGAGCCCCTCCGGTTCCCCGTCGCCGTACACACGACGGGATC
CGACGTCACGAGGCCCCTGACACTGGCGGGGGTTGGCCGGGCTGGTGGTGGCGCTGTTCGTGGGGCTCGGCTGGGACGTC
CTGTACGGCGAGGCGGTCGGCGTCCTCTCGCTGGCGCTCGTCTCCGTCGGACGGGTCCTGACGACCCTGCGCGCGTCGAG
GCTGGCCCGGCGCCTGTGGCTGCCCCCGGAGGTCGTCCCGATCGGATGAACGGCCTAGATCGGTCGGTAGGGTGGGGGAC
GTGGACCGAGCCGGTAACTCAACTCGCTCGGCGCGGCGATCGGTATTTCTTTAGCCCTTTTGATTCTCGCTGA

Upstream 100 bases:

>100_bases
TCTTGGGAACGCGCTTCCGGGATCGACGTTCTACCGCCCTCGTCGCGCCCGTCGTGTCGTCCGGCGTCGCGGGTCGAGGC
CGATCCCCCGACCCGCTGGG

Downstream 100 bases:

>100_bases
AGTTAAGGTGCACTTATACTATGGACGAGCTGAAGTACGAGGGCGATCCCTATGCCGTTCGCGTTACGCGTCGGGGAGGC
CTTCGTAGGCGAGCCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK
LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR
DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT
LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL
VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE
AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR

Sequences:

>Translated_450_residues
MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK
LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR
DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT
LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL
VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE
AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR
>Mature_450_residues
MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEVRLVLITRDLEHVVLPFRSRK
LYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERREDGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGR
DPEDVSPRKVGLSVVLGSLSILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT
LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPLPVLFGHFLAGPFVVAGAAAL
VPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGRAGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVE
AGPAPVAAPGGRPDRMNGLDRSVGWGTWTEPVTQLARRGDRYFFSPFDSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49460; Mature: 49460

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEV
CCCCCCCHHCCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCE
RLVLITRDLEHVVLPFRSRKLYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERRE
EEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGRDPEDVSPRKVGLSVVLGSLS
CCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT
HEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
PVLFGHFLAGPFVVAGAAALVPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGR
HHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCC
AGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVEAGPAPVAAPGGRPDRMNGLD
CCCCCCCHHHCCCHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCC
RSVGWGTWTEPVTQLARRGDRYFFSPFDSR
CCCCCCCHHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MVATVRPVRALPGSSTWVRLSSECIVVRGPDGTVRVRPEDVVSVKEHRSSRPRMDPDEEV
CCCCCCCHHCCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCE
RLVLITRDLEHVVLPFRSRKLYRGVKAILAARDGDVDRLLRHLRRVLRKERKPPLFERRE
EEEEEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DGVWLRWPWLEVRVGPPERARRVVRELLEYWLRLLKESGRDPEDVSPRKVGLSVVLGSLS
CCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ILFGGGKGKKGAAGAKVKAGAKGDAGGKTGGTALAKASKKLLLKMIKALMKLGVKVTFWT
HEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVAFVVAVALVPLAVMSVVYWLIARRAYRWGSVPWLRGLVLLQLQGFAVLTGFWCLFAPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
PVLFGHFLAGPFVVAGAAALVPPSLLLVRAYRREPLRFPVAVHTTGSDVTRPLTLAGVGR
HHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCC
AGGGAVRGARLGRPVRRGGRRPLAGARLRRTGPDDPARVEAGPAPVAAPGGRPDRMNGLD
CCCCCCCHHHCCCHHHHCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCC
RSVGWGTWTEPVTQLARRGDRYFFSPFDSR
CCCCCCCHHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA