| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094710
Identifier: 20094710
GI number: 20094710
Start: 1270586
End: 1271590
Strand: Reverse
Name: 20094710
Synonym: MK1274
Alternate gene names: NA
Gene position: 1271590-1270586 (Counterclockwise)
Preceding gene: 20094711
Following gene: 20094709
Centisome position: 75.02
GC content: 70.85
Gene sequence:
>1005_bases TTGCTCCTCAGACCCCTCGACCCGTGGTGCGGTGTGGTCGTCGACTACGGGGACACCCGCGTCTTCGTGGACGTGACGGA TCGGAAGGGACCGTACGTCAAGCGCGCGGACGCGGTGATCGTCACGCACCCTCACCGCGACCACTACGGCGGCGTCCCGA GGACGGAGTTCGGTGAGCTCCGAGCCGACGAGGTGACCGCGGCGCTCCTCGGGATGGAGGACGAGGCCGAGCCGCTCCGG TCCTCCTTCGAGGCCGGCCTGCTGGACGTGCGGACCTACCCGGTCAACCACATGTGCCCGAAGGCCCACGCGGTCCTCCT GTCGGGCGACGCGCGCGTGCTGATCACGGGGGACTGGTGCGCGCTCGGCGAGCACCCCCCGCTCTGGGAGCTGGTGGACG ACGAGGTGGACGCGATCGTGACCGAGTGCACCCGGGCCGCGAGCGTCCACCCGGACGACCCGGAGGCGGCGGAGTACCGG ATCCAGCGGCTCCTGGAACTCCACCGGGAGGACCGGACGGTGCTGCTGCTCACCCACGTGAACCCGCTGATCGACGTCGC CTCCGAGGTCGAGATCCTGCACGTGCTCGAGGGCGATCCGGTCGACGAGGCCGTCAAGGCGGGCGCGCACGAGGGGGCGG ACCTGGAGGTCGTGAGCCGCCCCGAGTACCCGCTCGTCACCTCGAGCGTCGGGACCGTGGAAGGGTTGTCGAAGAGGCCC CACGTCCTGATCACGGAGCGCTGGTTCCTCTACCGGGACCGGGAGGGGAGGCTGAGAAGGCTCCTGGACGCGGTCCCTTA CCCTTACATCGTATCGGGGACCGGGCACGCGAGCGCGGCCGAGCTCGTGCGGTTGGTTGAGGAGCTGGAGCCGGAGTACC TCGTGCTGCGGCACGGGTCGCCCGACGGCGTCCGGGCGCTGAGGAAACGGCTCGCGGGAGCGGGTCTGGACGTCCGGGTC GAGGCGTGGATCGGGAGGCGGGGCGGGAAGCTGGAGTTACCGTGA
Upstream 100 bases:
>100_bases GACGCGCCCTCTCGGTATCCCCTTTCTCTCTCGACTACCGTGACGATTTCCGGGCGAAACGATTCATCCTCCGGAGAACT GGACGCTTCCGGGGCGTCCG
Downstream 100 bases:
>100_bases ACTCATGCGATACGTTGATATACCGGAGAGCGAACGGGGGAATCGGGGTTCCGGCGGTGGTACCGGCGGCCCGTCGGGCG ATCCCGACGTTGGTGTCGTT
Product: metallo-beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: Fused Hydrolase/ Domain-Containing Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLLRPLDPWCGVVVDYGDTRVFVDVTDRKGPYVKRADAVIVTHPHRDHYGGVPRTEFGELRADEVTAALLGMEDEAEPLR SSFEAGLLDVRTYPVNHMCPKAHAVLLSGDARVLITGDWCALGEHPPLWELVDDEVDAIVTECTRAASVHPDDPEAAEYR IQRLLELHREDRTVLLLTHVNPLIDVASEVEILHVLEGDPVDEAVKAGAHEGADLEVVSRPEYPLVTSSVGTVEGLSKRP HVLITERWFLYRDREGRLRRLLDAVPYPYIVSGTGHASAAELVRLVEELEPEYLVLRHGSPDGVRALRKRLAGAGLDVRV EAWIGRRGGKLELP
Sequences:
>Translated_334_residues MLLRPLDPWCGVVVDYGDTRVFVDVTDRKGPYVKRADAVIVTHPHRDHYGGVPRTEFGELRADEVTAALLGMEDEAEPLR SSFEAGLLDVRTYPVNHMCPKAHAVLLSGDARVLITGDWCALGEHPPLWELVDDEVDAIVTECTRAASVHPDDPEAAEYR IQRLLELHREDRTVLLLTHVNPLIDVASEVEILHVLEGDPVDEAVKAGAHEGADLEVVSRPEYPLVTSSVGTVEGLSKRP HVLITERWFLYRDREGRLRRLLDAVPYPYIVSGTGHASAAELVRLVEELEPEYLVLRHGSPDGVRALRKRLAGAGLDVRV EAWIGRRGGKLELP >Mature_334_residues MLLRPLDPWCGVVVDYGDTRVFVDVTDRKGPYVKRADAVIVTHPHRDHYGGVPRTEFGELRADEVTAALLGMEDEAEPLR SSFEAGLLDVRTYPVNHMCPKAHAVLLSGDARVLITGDWCALGEHPPLWELVDDEVDAIVTECTRAASVHPDDPEAAEYR IQRLLELHREDRTVLLLTHVNPLIDVASEVEILHVLEGDPVDEAVKAGAHEGADLEVVSRPEYPLVTSSVGTVEGLSKRP HVLITERWFLYRDREGRLRRLLDAVPYPYIVSGTGHASAAELVRLVEELEPEYLVLRHGSPDGVRALRKRLAGAGLDVRV EAWIGRRGGKLELP
Specific function: Unknown
COG id: COG0595
COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37095; Mature: 37095
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRPLDPWCGVVVDYGDTRVFVDVTDRKGPYVKRADAVIVTHPHRDHYGGVPRTEFGEL CCCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCC RADEVTAALLGMEDEAEPLRSSFEAGLLDVRTYPVNHMCPKAHAVLLSGDARVLITGDWC CHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCEEEEEEECEE ALGEHPPLWELVDDEVDAIVTECTRAASVHPDDPEAAEYRIQRLLELHREDRTVLLLTHV ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC NPLIDVASEVEILHVLEGDPVDEAVKAGAHEGADLEVVSRPEYPLVTSSVGTVEGLSKRP CHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCCC HVLITERWFLYRDREGRLRRLLDAVPYPYIVSGTGHASAAELVRLVEELEPEYLVLRHGS CEEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC PDGVRALRKRLAGAGLDVRVEAWIGRRGGKLELP CHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCC >Mature Secondary Structure MLLRPLDPWCGVVVDYGDTRVFVDVTDRKGPYVKRADAVIVTHPHRDHYGGVPRTEFGEL CCCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCC RADEVTAALLGMEDEAEPLRSSFEAGLLDVRTYPVNHMCPKAHAVLLSGDARVLITGDWC CHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCEEEEEEECEE ALGEHPPLWELVDDEVDAIVTECTRAASVHPDDPEAAEYRIQRLLELHREDRTVLLLTHV ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC NPLIDVASEVEILHVLEGDPVDEAVKAGAHEGADLEVVSRPEYPLVTSSVGTVEGLSKRP CHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCCC HVLITERWFLYRDREGRLRRLLDAVPYPYIVSGTGHASAAELVRLVEELEPEYLVLRHGS CEEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC PDGVRALRKRLAGAGLDVRVEAWIGRRGGKLELP CHHHHHHHHHHCCCCCEEEEEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA