| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094695
Identifier: 20094695
GI number: 20094695
Start: 1245681
End: 1248527
Strand: Reverse
Name: 20094695
Synonym: MK1259
Alternate gene names: NA
Gene position: 1248527-1245681 (Counterclockwise)
Preceding gene: 20094704
Following gene: 20094693
Centisome position: 73.66
GC content: 63.44
Gene sequence:
>2847_bases GTGCCCACTCGGGACAGGAAGATCGACGAACGGTTCCCCGCCAGGGACGTTACGGACGAGGTGGCTAGGGAGATGCCGAT CACGGGTAGACCACCACTGCAGTACATTCACGTGTGGTGGGCGAGGCGGCCGCTGTCAGCGTCCAGGGCTGCCGTGCTCA CCACCTTGGTCCCAGTTGATGCCGATGAGGATGAACTCCTAGAGATCCTTCACGTTGGGGAGGATCAGGCCTCCTGGAAG TACACTCCCGTGACGGGTTCCCACGCCGACACGTCGAGCAAGGGCGCGGATCTGCGACAGTTCATTCCGGGTGATGCTCG AGATGAGGGTCACGGCGTGACCCTTCGACGTATGTACCGAGAGGCCACGGGTTCCGAGAGACCGTTGGTCGTGGATCCGA TGGCGGGTGGTGGGTCGATCCCGTTCGAGGCGTTGAGGCTCGGTTGTCGGGTGGTCGCAGGCGAGCTGAACCCGGTCGCG TGGCTCGTGCTCAAGGCCACGCTCGAGTACCCGGTCGAGTACGGGGGCGAACTCCTCGAGAAGATGCGCGGGTTCTTCGC GGAGATCCGCAAAGAGCTCGAGCAGCGCGTGGGCGAGTTCTACGGTGATAACGATCGCGCCTACGTTTGGATCAAGTGGA TCGAGTGCCCGAGGTGCGGGTTGAAGGTACCTACCCGCCCGAACTGGTGGTTGTTGAGGAAGCGGGGTAAGCCGGAGGAG TCGCTGGTCATCTTACCGGACGTGCCCGAAGAGGGTGAGGGTAACGAAGTCGGGTTCGACGTAGTTAGGTACTCCGAAGC TCGGGAAGATGGGTTCGACCCGGGCCGGGGTACCGTTAGTCGAGGGGCGGTGACCTGCCCGCGGTGCGGAACGACGATCC AACGGGAACAAGTGCACCGGCTTTCCCGCAGGCACTTCGAGGACGAGCACGGGTTCGTCCGCGCCTACCTGGCCGCGATC GTGGAGGGCTCGGGTAGGGGGAAGGAGTACCGCGCCGCCACCGATCGGGATCTGGAGTTCTTCGAGCGGGCGCGGGAGGA GTTGTTCGAGCGGTGGGACGAGCTGGTCGCCGAGGACCTCATCCCGACCGAGGAAATTCCGGAGGGTGAGAAGACTAGGG AGCCCAGGCTTCGCGGGATCGACAGCTTCTACAAGCTGTTCAACGAGAGACAGTTGCTCGTGCACGCGGAGTTACTCCGC GTGATCCGGGAGTTGAGCGGGGGTTTAGACGACGAGTACCGCGAGCCGCTCACCGTCTACGCGATGATAGCCTTCGACAA GATGATCAACTACAACACGATCTGCTCGCGATGGGAGTACACTCGCGGAGTTGTCAAAGGCATCTTCGACCAGCACGCGT ACTCGTGGGCTTGGGACTACGGCGAGATGAACGTGCTCGCGGAGGACGGTGGCTGGTACTGGGCCGCACCGAATGTACTC AAAGCGTTCAGACAGATCTCTCAAGCACTGTCAGGCGTTGATGGAGATGTTGAGGTGATCCTAGGAGACGCTAGAGCCCT ACCTCAGCACCTAAGGAACCTAGGCGTGGAAAGCGTCGACGCGATCGTCGTCGACCCACCTTACTACGACAACGTTCAGT ACGCGGAACTCGCCGACTTCTTCTACGTATGGTTGAAACGCCTGTTCGGACACCCGACGTTCCTCGTCACCATATCGAGA TCCTCGCCGGAGAGTGCCATGGAGTTCCAACGCGCGTTTTCGAACGAGCTGACGCCCAAGGACGAGGAGATCGTCGCCAA CAGAACCCGGCACGACGACCCCGAGCGGGAGTACGAGCGAGGACTTCGAGAATTCCTCGAAGCCTGCAGGGAAGTCCTCC CCGAGCACGGACGATTAACCCTAATGTTCACGCACAAGGCCACGGAGGCCTGGACCTCGCTGGTCCGAGCCCTGCGGGAC GCGGGGTTCGAGATCACGGAAGTATGGCCAGTGAGAACGGAGTCTGAACACTCGCTCCACCAGCGTTGGAAGGCGGCCGT GGGCACGACCCAGATCATCGCGTGCCGCCCGCGCTCGGGGAGCGAGGTGACCACGTGGCGTCGCGTGAGGGACGAGGTCC GCCGGAACGTTCGGGAGGCGTTCAGGAGGGCCGCCGACCTCGTGTTCTCCGACGCCGAGCGCCTGGTCGTGGCCCGCGGC GCCGCCCTACGCCCGTACACGCGGTACGATAAGGTCCTCAGGTCGAGGGGCGACGAGGAGGTCGAGGTCTCGCCCGAGGA GGTCATGGAGGAGGCTTACCGGGCCGTGCCCGAGGCCATCGCCGACCAGTTCGAGGAGACGATCGGCGAGACCCCCGGCT TCGAGGACCTCGACGAGGCGGGTAGGTTCTACTTCCTGTACCGGTTCTTCTGGGGGTACCCGAAGGAGCCCAGCGAGGCT CCCGACTACGAGGACGTGCTCATGCTCGCCCACGCCACGGACTTCCCGCTGAACAAGTACGAGTACCGGAGGCGACCCGA CGCCAAGGGCAAGCTAGTCAGGGTATCGTCGACCAGGGACAGGGGGACCGTCGCCATCCTGGACGACTTCGAGTCCAGGA AACCGGGCCGCGTGAACAACCAGGTGGACGCGCTCCACGCGGTACTCACCGCGCTCACGCGCGAGGGAGACGAACTCGAC ATGAGGACCGCCCTAGAGGTGGCCTTCGAGCACGAGGAGCTGTTCGAACCCATCGCCCGGGCCCTGGCCAGGCTCAGGGA GTACAGGCTCGAGGAGGTCGAGGACGAGGGAGAACTCGACGAGCGTTACCCGGAGCTGAAGTACGCCGCCCTCGTCCTGA AGAAGATGAGGGAGGTGAAGCAGAGGCGGAGGTTGCTGGGCGGATGA
Upstream 100 bases:
>100_bases ACGTCGAAGACCGAGGGGAGGTCCCCGCCGCTCAAGACTTAACCCCGAGGTAAGTTGTGGATTGGACGCTACGTAAAAAG GGAGTCGGAGGGGAGGGCGC
Downstream 100 bases:
>100_bases GTCAGGGCGGGAGCTCGAGGGACTCGTCCCTGCACCCTCTCCCCACCCACACCCTCACCTCGTCCACGAACCTGGAGTAG TACCGTTCGAGGCGGGTGGC
Product: DNA methylase containing a Zn-ribbon module
Products: NA
Alternate protein names: DNA Methylase; DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase Containing A Zn-Ribbon; DNA MethylAse Containing A Zn-Ribbon; DNA Methylase Containing Zn-Ribbon; Adenine-Specific DNA Methylase Containing A Zn-Ribbon
Number of amino acids: Translated: 948; Mature: 947
Protein sequence:
>948_residues MPTRDRKIDERFPARDVTDEVAREMPITGRPPLQYIHVWWARRPLSASRAAVLTTLVPVDADEDELLEILHVGEDQASWK YTPVTGSHADTSSKGADLRQFIPGDARDEGHGVTLRRMYREATGSERPLVVDPMAGGGSIPFEALRLGCRVVAGELNPVA WLVLKATLEYPVEYGGELLEKMRGFFAEIRKELEQRVGEFYGDNDRAYVWIKWIECPRCGLKVPTRPNWWLLRKRGKPEE SLVILPDVPEEGEGNEVGFDVVRYSEAREDGFDPGRGTVSRGAVTCPRCGTTIQREQVHRLSRRHFEDEHGFVRAYLAAI VEGSGRGKEYRAATDRDLEFFERAREELFERWDELVAEDLIPTEEIPEGEKTREPRLRGIDSFYKLFNERQLLVHAELLR VIRELSGGLDDEYREPLTVYAMIAFDKMINYNTICSRWEYTRGVVKGIFDQHAYSWAWDYGEMNVLAEDGGWYWAAPNVL KAFRQISQALSGVDGDVEVILGDARALPQHLRNLGVESVDAIVVDPPYYDNVQYAELADFFYVWLKRLFGHPTFLVTISR SSPESAMEFQRAFSNELTPKDEEIVANRTRHDDPEREYERGLREFLEACREVLPEHGRLTLMFTHKATEAWTSLVRALRD AGFEITEVWPVRTESEHSLHQRWKAAVGTTQIIACRPRSGSEVTTWRRVRDEVRRNVREAFRRAADLVFSDAERLVVARG AALRPYTRYDKVLRSRGDEEVEVSPEEVMEEAYRAVPEAIADQFEETIGETPGFEDLDEAGRFYFLYRFFWGYPKEPSEA PDYEDVLMLAHATDFPLNKYEYRRRPDAKGKLVRVSSTRDRGTVAILDDFESRKPGRVNNQVDALHAVLTALTREGDELD MRTALEVAFEHEELFEPIARALARLREYRLEEVEDEGELDERYPELKYAALVLKKMREVKQRRRLLGG
Sequences:
>Translated_948_residues MPTRDRKIDERFPARDVTDEVAREMPITGRPPLQYIHVWWARRPLSASRAAVLTTLVPVDADEDELLEILHVGEDQASWK YTPVTGSHADTSSKGADLRQFIPGDARDEGHGVTLRRMYREATGSERPLVVDPMAGGGSIPFEALRLGCRVVAGELNPVA WLVLKATLEYPVEYGGELLEKMRGFFAEIRKELEQRVGEFYGDNDRAYVWIKWIECPRCGLKVPTRPNWWLLRKRGKPEE SLVILPDVPEEGEGNEVGFDVVRYSEAREDGFDPGRGTVSRGAVTCPRCGTTIQREQVHRLSRRHFEDEHGFVRAYLAAI VEGSGRGKEYRAATDRDLEFFERAREELFERWDELVAEDLIPTEEIPEGEKTREPRLRGIDSFYKLFNERQLLVHAELLR VIRELSGGLDDEYREPLTVYAMIAFDKMINYNTICSRWEYTRGVVKGIFDQHAYSWAWDYGEMNVLAEDGGWYWAAPNVL KAFRQISQALSGVDGDVEVILGDARALPQHLRNLGVESVDAIVVDPPYYDNVQYAELADFFYVWLKRLFGHPTFLVTISR SSPESAMEFQRAFSNELTPKDEEIVANRTRHDDPEREYERGLREFLEACREVLPEHGRLTLMFTHKATEAWTSLVRALRD AGFEITEVWPVRTESEHSLHQRWKAAVGTTQIIACRPRSGSEVTTWRRVRDEVRRNVREAFRRAADLVFSDAERLVVARG AALRPYTRYDKVLRSRGDEEVEVSPEEVMEEAYRAVPEAIADQFEETIGETPGFEDLDEAGRFYFLYRFFWGYPKEPSEA PDYEDVLMLAHATDFPLNKYEYRRRPDAKGKLVRVSSTRDRGTVAILDDFESRKPGRVNNQVDALHAVLTALTREGDELD MRTALEVAFEHEELFEPIARALARLREYRLEEVEDEGELDERYPELKYAALVLKKMREVKQRRRLLGG >Mature_947_residues PTRDRKIDERFPARDVTDEVAREMPITGRPPLQYIHVWWARRPLSASRAAVLTTLVPVDADEDELLEILHVGEDQASWKY TPVTGSHADTSSKGADLRQFIPGDARDEGHGVTLRRMYREATGSERPLVVDPMAGGGSIPFEALRLGCRVVAGELNPVAW LVLKATLEYPVEYGGELLEKMRGFFAEIRKELEQRVGEFYGDNDRAYVWIKWIECPRCGLKVPTRPNWWLLRKRGKPEES LVILPDVPEEGEGNEVGFDVVRYSEAREDGFDPGRGTVSRGAVTCPRCGTTIQREQVHRLSRRHFEDEHGFVRAYLAAIV EGSGRGKEYRAATDRDLEFFERAREELFERWDELVAEDLIPTEEIPEGEKTREPRLRGIDSFYKLFNERQLLVHAELLRV IRELSGGLDDEYREPLTVYAMIAFDKMINYNTICSRWEYTRGVVKGIFDQHAYSWAWDYGEMNVLAEDGGWYWAAPNVLK AFRQISQALSGVDGDVEVILGDARALPQHLRNLGVESVDAIVVDPPYYDNVQYAELADFFYVWLKRLFGHPTFLVTISRS SPESAMEFQRAFSNELTPKDEEIVANRTRHDDPEREYERGLREFLEACREVLPEHGRLTLMFTHKATEAWTSLVRALRDA GFEITEVWPVRTESEHSLHQRWKAAVGTTQIIACRPRSGSEVTTWRRVRDEVRRNVREAFRRAADLVFSDAERLVVARGA ALRPYTRYDKVLRSRGDEEVEVSPEEVMEEAYRAVPEAIADQFEETIGETPGFEDLDEAGRFYFLYRFFWGYPKEPSEAP DYEDVLMLAHATDFPLNKYEYRRRPDAKGKLVRVSSTRDRGTVAILDDFESRKPGRVNNQVDALHAVLTALTREGDELDM RTALEVAFEHEELFEPIARALARLREYRLEEVEDEGELDERYPELKYAALVLKKMREVKQRRRLLGG
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 109262; Mature: 109131
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRDRKIDERFPARDVTDEVAREMPITGRPPLQYIHVWWARRPLSASRAAVLTTLVPVD CCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHEECCC ADEDELLEILHVGEDQASWKYTPVTGSHADTSSKGADLRQFIPGDARDEGHGVTLRRMYR CCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHH EATGSERPLVVDPMAGGGSIPFEALRLGCRVVAGELNPVAWLVLKATLEYPVEYGGELLE HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHH KMRGFFAEIRKELEQRVGEFYGDNDRAYVWIKWIECPRCGLKVPTRPNWWLLRKRGKPEE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCC SLVILPDVPEEGEGNEVGFDVVRYSEAREDGFDPGRGTVSRGAVTCPRCGTTIQREQVHR CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH LSRRHFEDEHGFVRAYLAAIVEGSGRGKEYRAATDRDLEFFERAREELFERWDELVAEDL HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC IPTEEIPEGEKTREPRLRGIDSFYKLFNERQLLVHAELLRVIRELSGGLDDEYREPLTVY CCCCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHH AMIAFDKMINYNTICSRWEYTRGVVKGIFDQHAYSWAWDYGEMNVLAEDGGWYWAAPNVL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCEEEECHHHH KAFRQISQALSGVDGDVEVILGDARALPQHLRNLGVESVDAIVVDPPYYDNVQYAELADF HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHH FYVWLKRLFGHPTFLVTISRSSPESAMEFQRAFSNELTPKDEEIVANRTRHDDPEREYER HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHH GLREFLEACREVLPEHGRLTLMFTHKATEAWTSLVRALRDAGFEITEVWPVRTESEHSLH HHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH QRWKAAVGTTQIIACRPRSGSEVTTWRRVRDEVRRNVREAFRRAADLVFSDAERLVVARG HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AALRPYTRYDKVLRSRGDEEVEVSPEEVMEEAYRAVPEAIADQFEETIGETPGFEDLDEA CCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GRFYFLYRFFWGYPKEPSEAPDYEDVLMLAHATDFPLNKYEYRRRPDAKGKLVRVSSTRD CHHEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEECCCC RGTVAILDDFESRKPGRVNNQVDALHAVLTALTREGDELDMRTALEVAFEHEELFEPIAR CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALARLREYRLEEVEDEGELDERYPELKYAALVLKKMREVKQRRRLLGG HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTRDRKIDERFPARDVTDEVAREMPITGRPPLQYIHVWWARRPLSASRAAVLTTLVPVD CCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHEECCC ADEDELLEILHVGEDQASWKYTPVTGSHADTSSKGADLRQFIPGDARDEGHGVTLRRMYR CCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHH EATGSERPLVVDPMAGGGSIPFEALRLGCRVVAGELNPVAWLVLKATLEYPVEYGGELLE HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHHH KMRGFFAEIRKELEQRVGEFYGDNDRAYVWIKWIECPRCGLKVPTRPNWWLLRKRGKPEE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCC SLVILPDVPEEGEGNEVGFDVVRYSEAREDGFDPGRGTVSRGAVTCPRCGTTIQREQVHR CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH LSRRHFEDEHGFVRAYLAAIVEGSGRGKEYRAATDRDLEFFERAREELFERWDELVAEDL HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC IPTEEIPEGEKTREPRLRGIDSFYKLFNERQLLVHAELLRVIRELSGGLDDEYREPLTVY CCCCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHH AMIAFDKMINYNTICSRWEYTRGVVKGIFDQHAYSWAWDYGEMNVLAEDGGWYWAAPNVL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCEEEECHHHH KAFRQISQALSGVDGDVEVILGDARALPQHLRNLGVESVDAIVVDPPYYDNVQYAELADF HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHH FYVWLKRLFGHPTFLVTISRSSPESAMEFQRAFSNELTPKDEEIVANRTRHDDPEREYER HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHH GLREFLEACREVLPEHGRLTLMFTHKATEAWTSLVRALRDAGFEITEVWPVRTESEHSLH HHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH QRWKAAVGTTQIIACRPRSGSEVTTWRRVRDEVRRNVREAFRRAADLVFSDAERLVVARG HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AALRPYTRYDKVLRSRGDEEVEVSPEEVMEEAYRAVPEAIADQFEETIGETPGFEDLDEA CCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GRFYFLYRFFWGYPKEPSEAPDYEDVLMLAHATDFPLNKYEYRRRPDAKGKLVRVSSTRD CHHEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEECCCC RGTVAILDDFESRKPGRVNNQVDALHAVLTALTREGDELDMRTALEVAFEHEELFEPIAR CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALARLREYRLEEVEDEGELDERYPELKYAALVLKKMREVKQRRRLLGG HHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA