Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094693

Identifier: 20094693

GI number: 20094693

Start: 1243554

End: 1244471

Strand: Reverse

Name: 20094693

Synonym: MK1257

Alternate gene names: NA

Gene position: 1244471-1243554 (Counterclockwise)

Preceding gene: 20094695

Following gene: 20094692

Centisome position: 73.42

GC content: 34.42

Gene sequence:

>918_bases
GTGGGGAAGTACGTGATCGTGTTTAGGGAGCCTGCGGAACCGATATACTGGAGGGCGAAATGGTTACTAGCTGCGGTAAA
GTGCTATCGGGAAAACAAGGAGTGCAGGGATTACATCCATAAAGAGATTGGTATCCACAAAGATGTTAAGGTAAGTCAAA
ATGATATAGAGACTAAGATCTTAGTGGAAGCGTTTATTAAGACCGATGAGAATATTAAACAAGGTGATATAAATACGATT
TTAGTGGCATTACTTAACCAATCACTAGAGCTGATGGCGAAGTACATTGCAGAGCGTTTAATGTGGCTTATCGGAATATG
GAAAAAAGGAAAAGAAGGTTACTACGTAATACTGAATCCAAATGATGCTAAAAAGGTAAGAAGGTGTGTATATAAGAGTC
ATAATGTAATTGACATACTTGATCATTTAAAGAAGACGCTTAAAGATATAGATGGGATAGCTGAGAAATTATGCGATGAA
GAATATTCTAATAATTGTAGATTAAGTGAGTTGGCTGATGAAATAAGTAAATTTATCAAAAAATATTGTAATATACTAGA
GAAAATGGAAGATGCGTATTATGATAAGTATTCTGATAACATTGAAAAGGGCGAGTTATGGTATTCTAAGAATGATGTAG
ATAAAGCTATAGAAGTCGTAGAAAAATTTGATAGAAGTATTGTAAGTTTAGCTATAGACGTAAGTGCACATATCCCTGGG
ATACTTACAGACATGAAATGGATATTATCAGAAATACGAAAAGCTGGCTGTGTTCCAGAAAATGAGATTAAAAAGAAGGC
ATTAGATAAGCGCAAAGTAAATGAGAAGGAACTACAAGAAATTATCAATTTTGCCGTTGAGAATAGTTGGATCGAGCGAA
AAGATGGCGAGTTAAAATGGATGAAAAATCAAATTTAA

Upstream 100 bases:

>100_bases
GCCAGTCGTTGGATCCCCAGCGCAGCCGAGAAAAAACACCTCGCTCCACAATGTTTATTTAGTAACTCTTCTAAACGTTG
CGGGAGCGGTACCTCAGCCC

Downstream 100 bases:

>100_bases
ACTAAATAGGGAGTAAAGTTCGGGTTGTAGCTATACTTCGAAGAACCATCACCGGGCCATCTGAAGCCTCCCCCGCCTCT
CCCCGAGGCCCCCATGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTI
LVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDE
EYSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG
ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI

Sequences:

>Translated_305_residues
MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTI
LVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDE
EYSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG
ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI
>Mature_304_residues
GKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTIL
VALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEE
YSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPGI
LTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35785; Mature: 35654

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKI
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVEAFIKTDENIKQGDINTILVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEEYSNNCRLSELADEISKFIK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG
HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKW
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCHHH
MKNQI
HHCCC
>Mature Secondary Structure 
GKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKI
CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVEAFIKTDENIKQGDINTILVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEEYSNNCRLSELADEISKFIK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG
HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKW
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCHHH
MKNQI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA