| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094693
Identifier: 20094693
GI number: 20094693
Start: 1243554
End: 1244471
Strand: Reverse
Name: 20094693
Synonym: MK1257
Alternate gene names: NA
Gene position: 1244471-1243554 (Counterclockwise)
Preceding gene: 20094695
Following gene: 20094692
Centisome position: 73.42
GC content: 34.42
Gene sequence:
>918_bases GTGGGGAAGTACGTGATCGTGTTTAGGGAGCCTGCGGAACCGATATACTGGAGGGCGAAATGGTTACTAGCTGCGGTAAA GTGCTATCGGGAAAACAAGGAGTGCAGGGATTACATCCATAAAGAGATTGGTATCCACAAAGATGTTAAGGTAAGTCAAA ATGATATAGAGACTAAGATCTTAGTGGAAGCGTTTATTAAGACCGATGAGAATATTAAACAAGGTGATATAAATACGATT TTAGTGGCATTACTTAACCAATCACTAGAGCTGATGGCGAAGTACATTGCAGAGCGTTTAATGTGGCTTATCGGAATATG GAAAAAAGGAAAAGAAGGTTACTACGTAATACTGAATCCAAATGATGCTAAAAAGGTAAGAAGGTGTGTATATAAGAGTC ATAATGTAATTGACATACTTGATCATTTAAAGAAGACGCTTAAAGATATAGATGGGATAGCTGAGAAATTATGCGATGAA GAATATTCTAATAATTGTAGATTAAGTGAGTTGGCTGATGAAATAAGTAAATTTATCAAAAAATATTGTAATATACTAGA GAAAATGGAAGATGCGTATTATGATAAGTATTCTGATAACATTGAAAAGGGCGAGTTATGGTATTCTAAGAATGATGTAG ATAAAGCTATAGAAGTCGTAGAAAAATTTGATAGAAGTATTGTAAGTTTAGCTATAGACGTAAGTGCACATATCCCTGGG ATACTTACAGACATGAAATGGATATTATCAGAAATACGAAAAGCTGGCTGTGTTCCAGAAAATGAGATTAAAAAGAAGGC ATTAGATAAGCGCAAAGTAAATGAGAAGGAACTACAAGAAATTATCAATTTTGCCGTTGAGAATAGTTGGATCGAGCGAA AAGATGGCGAGTTAAAATGGATGAAAAATCAAATTTAA
Upstream 100 bases:
>100_bases GCCAGTCGTTGGATCCCCAGCGCAGCCGAGAAAAAACACCTCGCTCCACAATGTTTATTTAGTAACTCTTCTAAACGTTG CGGGAGCGGTACCTCAGCCC
Downstream 100 bases:
>100_bases ACTAAATAGGGAGTAAAGTTCGGGTTGTAGCTATACTTCGAAGAACCATCACCGGGCCATCTGAAGCCTCCCCCGCCTCT CCCCGAGGCCCCCATGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTI LVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDE EYSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI
Sequences:
>Translated_305_residues MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTI LVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDE EYSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI >Mature_304_residues GKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKILVEAFIKTDENIKQGDINTIL VALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNPNDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEE YSNNCRLSELADEISKFIKKYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPGI LTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKWMKNQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35785; Mature: 35654
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKI CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH LVEAFIKTDENIKQGDINTILVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNP HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEEYSNNCRLSELADEISKFIK CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH KYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCHHH MKNQI HHCCC >Mature Secondary Structure GKYVIVFREPAEPIYWRAKWLLAAVKCYRENKECRDYIHKEIGIHKDVKVSQNDIETKI CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH LVEAFIKTDENIKQGDINTILVALLNQSLELMAKYIAERLMWLIGIWKKGKEGYYVILNP HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC NDAKKVRRCVYKSHNVIDILDHLKKTLKDIDGIAEKLCDEEYSNNCRLSELADEISKFIK CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH KYCNILEKMEDAYYDKYSDNIEKGELWYSKNDVDKAIEVVEKFDRSIVSLAIDVSAHIPG HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ILTDMKWILSEIRKAGCVPENEIKKKALDKRKVNEKELQEIINFAVENSWIERKDGELKW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCHHH MKNQI HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA