| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094704
Identifier: 20094704
GI number: 20094704
Start: 1261784
End: 1263256
Strand: Reverse
Name: 20094704
Synonym: MK1268
Alternate gene names: NA
Gene position: 1263256-1261784 (Counterclockwise)
Preceding gene: 20094706
Following gene: 20094695
Centisome position: 74.53
GC content: 75.02
Gene sequence:
>1473_bases ATGCTCCCCGCCCTGCTGGCGCTCGCGGTCCTCCTCGCGCTCCCGGGTGCCCGGGCCCTTGACCTGTACCCGGTGGAGGT GGTGGAGGTCGGGACGGACGCGGTGGGGCCGCCGGTGATCTCCTGGGACTACCCGTTCGAACGCGGTCCCACCGTCACGT ACCCGTCGGACGGCGGGTGGGTCCGGGTCCGCCTGGACGGCTCGCTCCGGGCGCGCGAGGTGGTGTTCGACGCGGCTCCC CCGGACCTGAGGGGGATCGCCTACCTGGCCCTCGAGCGCGACGGCCGCGTGATCGCCGTGGACTACCTGAATAGACGGGT CCTCGAGGACCGGGGCGCCCACCCGACGGTCCCGACGGTCTCCCGCTCCGACTCCGGCGCGGTCGTCGCGTACGTGCGGG ACGGGCGGCTTCGGGCCGTCCTCCTCGGCGAGGAGGCGAGTGTACCGCTGGAGCTCCACCTGCGGGGCGAGGACCCGTTC GTGCTCGTCCGGGAGGGGACCGTGCTGGTCGCGTACCGGTCGGGCGGCGACGTCCACCTGGCCGTCATGGGCACGGAGTG GTCCGTCCGGGTGCGCGGGTCGGAGTGCGTCCTACTCCACCGCGAGGGCGACCGGTGGGCCGAGGTCCTGCGCTGGTACA CGCCCGAGCGCCTCACCGACGCGGACCTGCTGGACCTCCTGAAGGGGCGCGCGCCGGAGGAGCGGGTCGTGTGCGGCGTC CCGGTGGAGCTGGGGTCCCGGACCGTCTGGGTGTTCCCGCTGCCCCTCGCCCCCGTGGTCGACGCGGGCACCGGGGCCGT CGTCGGCTGGTCCCACTCCGCCGGCCTCGAGCCCCGCGAGCTGATCGGGACGGTCGAGGAAGACGGCGACGTCCTGGTCT TCACCGGGTGGTGGGAGGGCCTCCACGCCTCGGTCGCCCCGGCGGCCCGGCTGAGCGGCTCCCGCGCGATCCCCGGCTCC CTCGGCCTCGTGGGCTGCGAGAGGGTGATGGCGGTCGCGTTCCGGGACCCGGACGGTCACGTCCGCGTGGCGGTCCCGGG CGGGGTCCGCGTCGCCCCGACGGTGGTCGTCCCGGTGGAGACCGTGGACCTGGGACCGGGCGAGCCGCTGGCGTTCCTCG AGGGGCTCGTGTTCTACCGGACCCCGGGGGGTGATGTCCGCTGCGCGGCGGTCCGGCCGGAGGGCGGACCGTTCGTCCGT CCCGTCGTCGAGGAGGTCCCGGTGCGCCGCTGGGAGGTCGGCGGTAAGGAGCTGCTCGTCGCGGGGTCGGTCGTCCTCGA CCCGGGGACCGGCCGCGCGTACGTCCTCCCGTCCGAGCGATCGGGGGAGCCGGTGTACCGCCGGGACCTGTCGGACGGTT GGTTCGTGGCCGTCTTCCGGTTCGACGACGGGTTCGTCGTGGTCCTCTCCGACGGGCGTTCCGTGCGGGAGTCCCGGGAG TACCGCTCGGTGACCCGACGTCGGAGGGGCTGA
Upstream 100 bases:
>100_bases GGGTACGGCGACGGGCTCTCCGAAACGGTAAGGGATATCTCGGGTTCCCGGAACGTGGGTTCCCCTCACTAATCCCGTAG GGAAGACCGGGGGACGCCGG
Downstream 100 bases:
>100_bases TCGTCGAGGACCGGGACGGTGTCCGTCACCTGCTGAAGCCGGTGCGTCGGGAGTACCCCGGTTTCGGGGAGTGGACGCTG GAGGAGTTCCCCGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MLPALLALAVLLALPGARALDLYPVEVVEVGTDAVGPPVISWDYPFERGPTVTYPSDGGWVRVRLDGSLRAREVVFDAAP PDLRGIAYLALERDGRVIAVDYLNRRVLEDRGAHPTVPTVSRSDSGAVVAYVRDGRLRAVLLGEEASVPLELHLRGEDPF VLVREGTVLVAYRSGGDVHLAVMGTEWSVRVRGSECVLLHREGDRWAEVLRWYTPERLTDADLLDLLKGRAPEERVVCGV PVELGSRTVWVFPLPLAPVVDAGTGAVVGWSHSAGLEPRELIGTVEEDGDVLVFTGWWEGLHASVAPAARLSGSRAIPGS LGLVGCERVMAVAFRDPDGHVRVAVPGGVRVAPTVVVPVETVDLGPGEPLAFLEGLVFYRTPGGDVRCAAVRPEGGPFVR PVVEEVPVRRWEVGGKELLVAGSVVLDPGTGRAYVLPSERSGEPVYRRDLSDGWFVAVFRFDDGFVVVLSDGRSVRESRE YRSVTRRRRG
Sequences:
>Translated_490_residues MLPALLALAVLLALPGARALDLYPVEVVEVGTDAVGPPVISWDYPFERGPTVTYPSDGGWVRVRLDGSLRAREVVFDAAP PDLRGIAYLALERDGRVIAVDYLNRRVLEDRGAHPTVPTVSRSDSGAVVAYVRDGRLRAVLLGEEASVPLELHLRGEDPF VLVREGTVLVAYRSGGDVHLAVMGTEWSVRVRGSECVLLHREGDRWAEVLRWYTPERLTDADLLDLLKGRAPEERVVCGV PVELGSRTVWVFPLPLAPVVDAGTGAVVGWSHSAGLEPRELIGTVEEDGDVLVFTGWWEGLHASVAPAARLSGSRAIPGS LGLVGCERVMAVAFRDPDGHVRVAVPGGVRVAPTVVVPVETVDLGPGEPLAFLEGLVFYRTPGGDVRCAAVRPEGGPFVR PVVEEVPVRRWEVGGKELLVAGSVVLDPGTGRAYVLPSERSGEPVYRRDLSDGWFVAVFRFDDGFVVVLSDGRSVRESRE YRSVTRRRRG >Mature_490_residues MLPALLALAVLLALPGARALDLYPVEVVEVGTDAVGPPVISWDYPFERGPTVTYPSDGGWVRVRLDGSLRAREVVFDAAP PDLRGIAYLALERDGRVIAVDYLNRRVLEDRGAHPTVPTVSRSDSGAVVAYVRDGRLRAVLLGEEASVPLELHLRGEDPF VLVREGTVLVAYRSGGDVHLAVMGTEWSVRVRGSECVLLHREGDRWAEVLRWYTPERLTDADLLDLLKGRAPEERVVCGV PVELGSRTVWVFPLPLAPVVDAGTGAVVGWSHSAGLEPRELIGTVEEDGDVLVFTGWWEGLHASVAPAARLSGSRAIPGS LGLVGCERVMAVAFRDPDGHVRVAVPGGVRVAPTVVVPVETVDLGPGEPLAFLEGLVFYRTPGGDVRCAAVRPEGGPFVR PVVEEVPVRRWEVGGKELLVAGSVVLDPGTGRAYVLPSERSGEPVYRRDLSDGWFVAVFRFDDGFVVVLSDGRSVRESRE YRSVTRRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53061; Mature: 53061
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPALLALAVLLALPGARALDLYPVEVVEVGTDAVGPPVISWDYPFERGPTVTYPSDGGW CCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCE VRVRLDGSLRAREVVFDAAPPDLRGIAYLALERDGRVIAVDYLNRRVLEDRGAHPTVPTV EEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEHHCHHHHHHCCCCCCCCCC SRSDSGAVVAYVRDGRLRAVLLGEEASVPLELHLRGEDPFVLVREGTVLVAYRSGGDVHL CCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCEEE AVMGTEWSVRVRGSECVLLHREGDRWAEVLRWYTPERLTDADLLDLLKGRAPEERVVCGV EEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEC PVELGSRTVWVFPLPLAPVVDAGTGAVVGWSHSAGLEPRELIGTVEEDGDVLVFTGWWEG CHHHCCEEEEEEECCCCCEEECCCCEEEEECCCCCCCHHHHHEEECCCCCEEEEECCCCC LHASVAPAARLSGSRAIPGSLGLVGCERVMAVAFRDPDGHVRVAVPGGVRVAPTVVVPVE CCCCCCCHHHCCCCCCCCCCCCHHHHCEEEEEEEECCCCCEEEEECCCCEECCEEEEEEE TVDLGPGEPLAFLEGLVFYRTPGGDVRCAAVRPEGGPFVRPVVEEVPVRRWEVGGKELLV EEECCCCCCHHHHCCEEEEECCCCCEEEEEECCCCCCEECHHHHHCCCEEEECCCCEEEE AGSVVLDPGTGRAYVLPSERSGEPVYRRDLSDGWFVAVFRFDDGFVVVLSDGRSVRESRE EEEEEECCCCCEEEEECCCCCCCCHHEECCCCCEEEEEEEECCCEEEEECCCCCHHHHHH YRSVTRRRRG HHHHHHHHCC >Mature Secondary Structure MLPALLALAVLLALPGARALDLYPVEVVEVGTDAVGPPVISWDYPFERGPTVTYPSDGGW CCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCE VRVRLDGSLRAREVVFDAAPPDLRGIAYLALERDGRVIAVDYLNRRVLEDRGAHPTVPTV EEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEHHCHHHHHHCCCCCCCCCC SRSDSGAVVAYVRDGRLRAVLLGEEASVPLELHLRGEDPFVLVREGTVLVAYRSGGDVHL CCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCEEE AVMGTEWSVRVRGSECVLLHREGDRWAEVLRWYTPERLTDADLLDLLKGRAPEERVVCGV EEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEC PVELGSRTVWVFPLPLAPVVDAGTGAVVGWSHSAGLEPRELIGTVEEDGDVLVFTGWWEG CHHHCCEEEEEEECCCCCEEECCCCEEEEECCCCCCCHHHHHEEECCCCCEEEEECCCCC LHASVAPAARLSGSRAIPGSLGLVGCERVMAVAFRDPDGHVRVAVPGGVRVAPTVVVPVE CCCCCCCHHHCCCCCCCCCCCCHHHHCEEEEEEEECCCCCEEEEECCCCEECCEEEEEEE TVDLGPGEPLAFLEGLVFYRTPGGDVRCAAVRPEGGPFVRPVVEEVPVRRWEVGGKELLV EEECCCCCCHHHHCCEEEEECCCCCEEEEEECCCCCCEECHHHHHCCCEEEECCCCEEEE AGSVVLDPGTGRAYVLPSERSGEPVYRRDLSDGWFVAVFRFDDGFVVVLSDGRSVRESRE EEEEEECCCCCEEEEECCCCCCCCHHEECCCCCEEEEEEEECCCEEEEECCCCCHHHHHH YRSVTRRRRG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA