Click here to switch to the map view.

The map label for this gene is CdsA

Identifier: 20094509

GI number: 20094509

Start: 1040378

End: 1040899

Strand: Reverse

Name: CdsA

Synonym: MK1073

Alternate gene names: NA

Gene position: 1040899-1040378 (Counterclockwise)

Preceding gene: 20094512

Following gene: 20094508

Centisome position: 61.41

GC content: 61.88

Gene sequence:

>522_bases
ATGGTTGAAATGGGAAGCGGGGCATGGTTGGAACTCGGAAAGGGTCTCTGGTTCATCCTACCGGCGTACATCGCGAACTT
GAGCGCGTGCCTTTTCGGCGGCGGGAGACCGCTCGATTTCGGTAAAAAGCTTTCTGACGGGCGCCGACTGCTGGGTGATG
GTGTAACGATCCGTGGCTTTATCGTGGGCGTCTTGGCGGGAGCCGTGGTGGGACTCGGAGAGGGGCTCGTGGTTGGGGAC
CCCTGGAAAGCCGGTGATGGGTTTATTCTAGGGCTCGGTGCGATGGCCGGCGACGCGGTAGGCAGCTTCGTGAAGCGCAG
GATCGGGCTCGAACGCGGAGCACCCGCTCCGGTGCTCGATCAGCTGGACTTCTTCGTTGGGGCGGTGCTGCTCTACTATC
TGGTGTACGGGTGGCACCCACCGGGTTGGGTGCTAGTCGGTCTGGCCATCCTGACCCTGGCGCTCCACTGGCTGACCAAC
GTCATCGGATACCTCCTGAAGCTGAAGGAGGTGCCATGGTGA

Upstream 100 bases:

>100_bases
CGGCGGTCCGAACGAGCCTCGCCGGTACCACTCGGAGACATTCGGGGCAGAGGCTCTCGGTCTCGTACAGGGTGTCGCTC
ACTACCGGACCCCCGAGGGG

Downstream 100 bases:

>100_bases
TGAATCGGGAGAGACTCGCCGAGATGTTGTTGGAGGTAGGGGCACTGAAGTTCGGGGATTTCGTGCTCTCCTCGGGTAAG
CGAAGTGACTATTACGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVEMGSGAWLELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGFIVGVLAGAVVGLGEGLVVGD
PWKAGDGFILGLGAMAGDAVGSFVKRRIGLERGAPAPVLDQLDFFVGAVLLYYLVYGWHPPGWVLVGLAILTLALHWLTN
VIGYLLKLKEVPW

Sequences:

>Translated_173_residues
MVEMGSGAWLELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGFIVGVLAGAVVGLGEGLVVGD
PWKAGDGFILGLGAMAGDAVGSFVKRRIGLERGAPAPVLDQLDFFVGAVLLYYLVYGWHPPGWVLVGLAILTLALHWLTN
VIGYLLKLKEVPW
>Mature_173_residues
MVEMGSGAWLELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGFIVGVLAGAVVGLGEGLVVGD
PWKAGDGFILGLGAMAGDAVGSFVKRRIGLERGAPAPVLDQLDFFVGAVLLYYLVYGWHPPGWVLVGLAILTLALHWLTN
VIGYLLKLKEVPW

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0290 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1073_METKA (Q8TWG2)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614356.1
- ProteinModelPortal:   Q8TWG2
- GeneID:   1477174
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1073
- NMPDR:   fig|190192.1.peg.1069
- HOGENOM:   HBG297562
- OMA:   GKTWRGT
- ProtClustDB:   PRK04032
- BioCyc:   MKAN190192:MK1073-MONOMER
- HAMAP:   MF_01117
- InterPro:   IPR002726

Pfam domain/function: PF01864 DUF46

EC number: NA

Molecular weight: Translated: 18347; Mature: 18347

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd2dad04)-; HASH(0xdfca820)-; HASH(0xd8198ec)-; HASH(0xdab372c)-; HASH(0xdc86184)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEMGSGAWLELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGF
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH
IVGVLAGAVVGLGEGLVVGDPWKAGDGFILGLGAMAGDAVGSFVKRRIGLERGAPAPVLD
HHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHH
QLDFFVGAVLLYYLVYGWHPPGWVLVGLAILTLALHWLTNVIGYLLKLKEVPW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MVEMGSGAWLELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGF
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH
IVGVLAGAVVGLGEGLVVGDPWKAGDGFILGLGAMAGDAVGSFVKRRIGLERGAPAPVLD
HHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHH
QLDFFVGAVLLYYLVYGWHPPGWVLVGLAILTLALHWLTNVIGYLLKLKEVPW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11930014