| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094512
Identifier: 20094512
GI number: 20094512
Start: 1043739
End: 1044446
Strand: Reverse
Name: 20094512
Synonym: MK1076
Alternate gene names: NA
Gene position: 1044446-1043739 (Counterclockwise)
Preceding gene: 20094514
Following gene: 20094509
Centisome position: 61.62
GC content: 64.41
Gene sequence:
>708_bases TTGTCGGATCCGTTGAAGGGGATAATCGAGGAGATCCGGGCGGACCTAGGTTATAAGGAGTCCGAGGACCTGTGGGCCGC CTCGTTCTTGTGCGAGCTCCTCCGCGACCATCCCCGCGTCCTACGCCCGGAGGACCTGCCGGTCGAAGAAGAGGTGGTCG TGGTGGGAGCCGGTCCCTCGATAGCGGAGCTGCCGAAGATCGTCGGGGAGCTGGAGGACAGTGTCGTCTACGCCGCCGAC GGCGCCTGTAGAGCCCTCCTCGAGCTCGGAATCGTACCGGACGTCGTCGTGACGGATCTCGACGGACCGAAGGAGTACCT GCTGATGTCCAGCGAGTGCGGTTCCATCACGGTCGTACACGCCCACGGGGATAACGTGACCGAGCTGGCGGAACTCGTAC CCACTCTCGGCAGGATCCTAGGAACGTGTCAGGTCGAGCCACCGTGTGACCTCCTGCACAATTTCGGAGGCTTCACGGAT GGAGATCGGGCGGTGGTCATGGCGGCGAGGTTGGGCGCGGAGCGCGTGCTCACCGTGGGAATGGACTTCGGGAACCTCAC GACGGAGTACTCCCGACCCGGTGAAGGCAGGGGAGTTTTCCGGGCCGATCCCGTGAAGAGGAAGAAGCTGGCCTGGGGCG AACGCGTGCTCAGGCTCGTGGAGCGGGAGTTGGGTGTCGAGGTGGAGTCCCTCACGGTCCGGCGATGA
Upstream 100 bases:
>100_bases CTCTTCCACCTCCGGGTGTCGGGCGAGGAGTCTAAGGAGCTCGCCTCCGGTGTAACCTGATGCACCCACGATGCCGACCA CGACCACGCGGGGTTCCCCC
Downstream 100 bases:
>100_bases TCGGACCGCTCCCGGCGACGGTGGATGAGCGGATGGCCAGCGGAGGTGAGCCGCTCTGGCTCTCTGTTCATATTACTCAG CGCGATCCACCTCGAGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSDPLKGIIEEIRADLGYKESEDLWAASFLCELLRDHPRVLRPEDLPVEEEVVVVGAGPSIAELPKIVGELEDSVVYAAD GACRALLELGIVPDVVVTDLDGPKEYLLMSSECGSITVVHAHGDNVTELAELVPTLGRILGTCQVEPPCDLLHNFGGFTD GDRAVVMAARLGAERVLTVGMDFGNLTTEYSRPGEGRGVFRADPVKRKKLAWGERVLRLVERELGVEVESLTVRR
Sequences:
>Translated_235_residues MSDPLKGIIEEIRADLGYKESEDLWAASFLCELLRDHPRVLRPEDLPVEEEVVVVGAGPSIAELPKIVGELEDSVVYAAD GACRALLELGIVPDVVVTDLDGPKEYLLMSSECGSITVVHAHGDNVTELAELVPTLGRILGTCQVEPPCDLLHNFGGFTD GDRAVVMAARLGAERVLTVGMDFGNLTTEYSRPGEGRGVFRADPVKRKKLAWGERVLRLVERELGVEVESLTVRR >Mature_234_residues SDPLKGIIEEIRADLGYKESEDLWAASFLCELLRDHPRVLRPEDLPVEEEVVVVGAGPSIAELPKIVGELEDSVVYAADG ACRALLELGIVPDVVVTDLDGPKEYLLMSSECGSITVVHAHGDNVTELAELVPTLGRILGTCQVEPPCDLLHNFGGFTDG DRAVVMAARLGAERVLTVGMDFGNLTTEYSRPGEGRGVFRADPVKRKKLAWGERVLRLVERELGVEVESLTVRR
Specific function: Unknown
COG id: COG1634
COG function: function code R; Uncharacterized Rossmann fold enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1634 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002826 - InterPro: IPR007371 [H]
Pfam domain/function: PF01973 DUF115 [H]
EC number: NA
Molecular weight: Translated: 25586; Mature: 25454
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPLKGIIEEIRADLGYKESEDLWAASFLCELLRDHPRVLRPEDLPVEEEVVVVGAGPS CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC IAELPKIVGELEDSVVYAADGACRALLELGIVPDVVVTDLDGPKEYLLMSSECGSITVVH HHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHEEEECCCCEEEEEE AHGDNVTELAELVPTLGRILGTCQVEPPCDLLHNFGGFTDGDRAVVMAARLGAERVLTVG ECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHEEEEE MDFGNLTTEYSRPGEGRGVFRADPVKRKKLAWGERVLRLVERELGVEVESLTVRR CCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEHHEEECC >Mature Secondary Structure SDPLKGIIEEIRADLGYKESEDLWAASFLCELLRDHPRVLRPEDLPVEEEVVVVGAGPS CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC IAELPKIVGELEDSVVYAADGACRALLELGIVPDVVVTDLDGPKEYLLMSSECGSITVVH HHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHEEEECCCCEEEEEE AHGDNVTELAELVPTLGRILGTCQVEPPCDLLHNFGGFTDGDRAVVMAARLGAERVLTVG ECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHEEEEE MDFGNLTTEYSRPGEGRGVFRADPVKRKKLAWGERVLRLVERELGVEVESLTVRR CCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]