| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094409
Identifier: 20094409
GI number: 20094409
Start: 932946
End: 934205
Strand: Direct
Name: 20094409
Synonym: MK0973
Alternate gene names: NA
Gene position: 932946-934205 (Clockwise)
Preceding gene: 20094408
Following gene: 20094410
Centisome position: 55.04
GC content: 54.76
Gene sequence:
>1260_bases GTGACCACTGAGAACTGCGACGTCGAATCGGTCACGATCGAACTACTGCGTGACGGTCAGATGGTCGACAGGAAGACGGT GAGTTCTCCGCAAGGTTCTGTTGAATTCACGGTGACCGAGGAGGGTGAGTATCAGGTCAGGATCATCGTCGAATGTACTC GCGGTGTAACAGCTGAGACGCTAACAAACTCCGTTACAGTGCGGTTCCCGAGTGCTTCGGTGTCTGGTGGGCTTAGTATC GAGAGTGTGAGCTCCTCATCGGCGGTGCTTAAAGTTGACTACTCGGTGACAACCGAAGACTGTAGCGTCGAATCAGTCAC TGTAGAACTACTATGCAACGGTCACGTTATCGACACTAAGACGCTGAACTCACCACAGGATTCAGTCGAGTTCACGGTGA CCCAAGAGGGTGATTACACGGCCAGGATCATCGTACAGTGCACGAGTGGTGTAATCACTGAAGCGATGACGAATACCGTC ACAGTACGATTCCCAAGCGCGTCAGTATCCGGTAAGCTCAGTATCAAAAACTTAGGCGCCTCATCTGCGGTACTGGAAGT CGACTACTCGATAGCAACCGAGAATTGCGGTGTCAACTCAGTAACGATCGAGTTACTACGCGACGATCAAGTAGTCACTA CCAAGACTGTTAATTCACCACAAGGTTCCATCGAATTCACGGTGACCGAGGAAGGCAAATACAAGGCCAAGATCATTGCG AGATGTACGAACGGTGTGACCATCGAAACACTGACCAACGCAGTTGTAGTACAGTTCCCGAGCACGCAGACGCCGGCCGG CATTCGGTTCGATCTATCGATCCTATCGCCGCTGGCGGCGATCGCGGGTATAATGTTGGCGTGGCAGCTCCTCGGCCAAC CGGTTCAGACCACGAGTGAGACCGTGGAAGCACCTACAATCCCGAACAAGCAAGTAACGGCCAAGGAGGTTCAGAAGGAG GGAGTCGAGCAGGAACGTAAGACGACGAACGTCCCGGAGACCGAGAAGATCAAGGAGGGTAAGGAGCTCGGGAAGCCGCT GTCAGAACTCCGATCTCGAGAGGAGGTGGAGAAAGTGCGCGGAGCGGTGGAAGTCGGAGAGTCAGTACGGAGTGAGAACG GTTCGAGCCGTCGGCGAGGTGGTACGACCGGTGTCCTGGTGATCGGTAAGTACGTCACGGGAATCCCGGGCGTGCTAGCG CTGCTAGCCGGAGTGTGTGCTGTAGTCGGTGCAGCGCTGATCTTCAGGTGTCGGCGCTGA
Upstream 100 bases:
>100_bases CGGTACCTCCACGGTCAGGCTAGCTCGGGCGTCGGTATCGGGCGAGCTCAAGGTGAAGGACATCTCGGGATTACAGGCGA CGTTGGTGGTCAGTTACTCG
Downstream 100 bases:
>100_bases CGCCCCTCGATCATTTTATATCTTCCGAATCGTTACTCGTCTCAAAACGTTCGGGGGAGTACGGGGTTGCATTACGTCCT GGAGTGTGTTGAATGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTTENCDVESVTIELLRDGQMVDRKTVSSPQGSVEFTVTEEGEYQVRIIVECTRGVTAETLTNSVTVRFPSASVSGGLSI ESVSSSSAVLKVDYSVTTEDCSVESVTVELLCNGHVIDTKTLNSPQDSVEFTVTQEGDYTARIIVQCTSGVITEAMTNTV TVRFPSASVSGKLSIKNLGASSAVLEVDYSIATENCGVNSVTIELLRDDQVVTTKTVNSPQGSIEFTVTEEGKYKAKIIA RCTNGVTIETLTNAVVVQFPSTQTPAGIRFDLSILSPLAAIAGIMLAWQLLGQPVQTTSETVEAPTIPNKQVTAKEVQKE GVEQERKTTNVPETEKIKEGKELGKPLSELRSREEVEKVRGAVEVGESVRSENGSSRRRGGTTGVLVIGKYVTGIPGVLA LLAGVCAVVGAALIFRCRR
Sequences:
>Translated_419_residues MTTENCDVESVTIELLRDGQMVDRKTVSSPQGSVEFTVTEEGEYQVRIIVECTRGVTAETLTNSVTVRFPSASVSGGLSI ESVSSSSAVLKVDYSVTTEDCSVESVTVELLCNGHVIDTKTLNSPQDSVEFTVTQEGDYTARIIVQCTSGVITEAMTNTV TVRFPSASVSGKLSIKNLGASSAVLEVDYSIATENCGVNSVTIELLRDDQVVTTKTVNSPQGSIEFTVTEEGKYKAKIIA RCTNGVTIETLTNAVVVQFPSTQTPAGIRFDLSILSPLAAIAGIMLAWQLLGQPVQTTSETVEAPTIPNKQVTAKEVQKE GVEQERKTTNVPETEKIKEGKELGKPLSELRSREEVEKVRGAVEVGESVRSENGSSRRRGGTTGVLVIGKYVTGIPGVLA LLAGVCAVVGAALIFRCRR >Mature_418_residues TTENCDVESVTIELLRDGQMVDRKTVSSPQGSVEFTVTEEGEYQVRIIVECTRGVTAETLTNSVTVRFPSASVSGGLSIE SVSSSSAVLKVDYSVTTEDCSVESVTVELLCNGHVIDTKTLNSPQDSVEFTVTQEGDYTARIIVQCTSGVITEAMTNTVT VRFPSASVSGKLSIKNLGASSAVLEVDYSIATENCGVNSVTIELLRDDQVVTTKTVNSPQGSIEFTVTEEGKYKAKIIAR CTNGVTIETLTNAVVVQFPSTQTPAGIRFDLSILSPLAAIAGIMLAWQLLGQPVQTTSETVEAPTIPNKQVTAKEVQKEG VEQERKTTNVPETEKIKEGKELGKPLSELRSREEVEKVRGAVEVGESVRSENGSSRRRGGTTGVLVIGKYVTGIPGVLAL LAGVCAVVGAALIFRCRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44693; Mature: 44562
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50866 GOLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTENCDVESVTIELLRDGQMVDRKTVSSPQGSVEFTVTEEGEYQVRIIVECTRGVTAET CCCCCCCHHHEEEEEHHCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHH LTNSVTVRFPSASVSGGLSIESVSSSSAVLKVDYSVTTEDCSVESVTVELLCNGHVIDTK HCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEECCEEEECC TLNSPQDSVEFTVTQEGDYTARIIVQCTSGVITEAMTNTVTVRFPSASVSGKLSIKNLGA CCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHCCEEEEEECCCCCCCEEEEEECCC SSAVLEVDYSIATENCGVNSVTIELLRDDQVVTTKTVNSPQGSIEFTVTEEGKYKAKIIA CCEEEEEEEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE RCTNGVTIETLTNAVVVQFPSTQTPAGIRFDLSILSPLAAIAGIMLAWQLLGQPVQTTSE EECCCEEEEEECCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TVEAPTIPNKQVTAKEVQKEGVEQERKTTNVPETEKIKEGKELGKPLSELRSREEVEKVR HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH GAVEVGESVRSENGSSRRRGGTTGVLVIGKYVTGIPGVLALLAGVCAVVGAALIFRCRR HHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTENCDVESVTIELLRDGQMVDRKTVSSPQGSVEFTVTEEGEYQVRIIVECTRGVTAET CCCCCCHHHEEEEEHHCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHH LTNSVTVRFPSASVSGGLSIESVSSSSAVLKVDYSVTTEDCSVESVTVELLCNGHVIDTK HCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEECCEEEECC TLNSPQDSVEFTVTQEGDYTARIIVQCTSGVITEAMTNTVTVRFPSASVSGKLSIKNLGA CCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHCCEEEEEECCCCCCCEEEEEECCC SSAVLEVDYSIATENCGVNSVTIELLRDDQVVTTKTVNSPQGSIEFTVTEEGKYKAKIIA CCEEEEEEEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE RCTNGVTIETLTNAVVVQFPSTQTPAGIRFDLSILSPLAAIAGIMLAWQLLGQPVQTTSE EECCCEEEEEECCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TVEAPTIPNKQVTAKEVQKEGVEQERKTTNVPETEKIKEGKELGKPLSELRSREEVEKVR HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH GAVEVGESVRSENGSSRRRGGTTGVLVIGKYVTGIPGVLALLAGVCAVVGAALIFRCRR HHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA