| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is ThrC [H]
Identifier: 20094410
GI number: 20094410
Start: 934272
End: 935483
Strand: Direct
Name: ThrC [H]
Synonym: MK0974
Alternate gene names: 20094410
Gene position: 934272-935483 (Clockwise)
Preceding gene: 20094409
Following gene: 20094412
Centisome position: 55.12
GC content: 63.04
Gene sequence:
>1212_bases TTGCATTACGTCCTGGAGTGTGTTGAATGCGGTTCGGAGTTCGATGATGACTCACTGGTACGGTGCCCCGAGTGCGGAGG ACTCCTGGAGGTGGCACTGCGCTACGACGAAATCGAGGTGAGTCGGTCGACGTTCGAGGGTCGTCGCCTCGGCGTATGGG CCTTCCGGGAGCTCCTACCAGTGAACACGGACGATCCCGTCACGATGTCCGAGGGCGGTACGGGCTTACACCCGTGTCCG AGACTGGGCGAGGAGCTCGGTGTTAGGGAGCTGTTCGTGAAGAACGAGGGCGAGAACCCCACGGGCTCCTTCAAGGATCG GGGAATGACCGTGGGAGTTACCAAGGCCGTGGAGCTCGGTGCGGAGGTCGTCGCATGTGCCTCGACGGGCAACACATCGG CCTCGTTGGCCGCCTACGCCGCCCGCGCGGGCCTTACGTGTGCCGTCCTCCTTCCGGCCGGTAAGGTGGCCCTAGGCAAA CTCGCTCAAGCCCTCTTCCACGGTGCCCGCGTGATTCCAGTGAACGGCAACTTCGACGACGCCTTGGATGTCGTGAAGAA GCTGGCCGATGAGGGCATCGTGTACATTCTAAACTCCGTGAACCCGTTCCGCCTCTCCGGTCAGCGTACCATCGCGTACG AGATCTGCTTGCAGTTGGACTGGGAGGTCCCCGACGCGGTCGTCGTGCCGGTCGGTAACGCGGGTAACATCAGCGCGATC TGGCAGGGGTTCCTCGATCTCTACAGGCTGGGAATCATCGACGAGCTCCCGAGGATGTACGGAGTACAGGCGGAGGGTGC TCGACCGATCGTCGAGGCGATTCGGCGGGGCAAGGAGGACATCGAACCGGATCCCGAGCCCGAAACCGTCGCCACCGCGA TCCGCATCGGTAACCCAGTGAACGCCATCAAGGCTCTCCGTGCCATCCGGTGTTCGGGCGGCTGGGCCGTAGAGGTCTCC GACGAGGAAATACTCTCGGCGCAGCGTGAGCTCGCAACGCGGGAGGGGATCTTCGTGGAGCCGGCGAGTGCCGCCTCGAT AGCGGGACTCAGGAAGTTCGTGGAGGAGGGTGAGATCGACGCCGACGAGCGGGTGGTCTGCGTGACCACCGGACACGGTT TGAAGGATCCGGAGACGGTCATGGAAGTGTGTGAGCTGCCTGAACCCGTGGAACCGGATCCCGAGACCATACAGCGTTTA ATCGCCGAGTGA
Upstream 100 bases:
>100_bases CGGTGCAGCGCTGATCTTCAGGTGTCGGCGCTGACGCCCCTCGATCATTTTATATCTTCCGAATCGTTACTCGTCTCAAA ACGTTCGGGGGAGTACGGGG
Downstream 100 bases:
>100_bases CCTCTACGGCTCCCTCGGATGTCAGTCTTACTCACAGGGCAAGGTCGCTCCGCGATCCTTCCAACGTCGGAAAACGTTAT GAACACGATAACGAATCACG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MHYVLECVECGSEFDDDSLVRCPECGGLLEVALRYDEIEVSRSTFEGRRLGVWAFRELLPVNTDDPVTMSEGGTGLHPCP RLGEELGVRELFVKNEGENPTGSFKDRGMTVGVTKAVELGAEVVACASTGNTSASLAAYAARAGLTCAVLLPAGKVALGK LAQALFHGARVIPVNGNFDDALDVVKKLADEGIVYILNSVNPFRLSGQRTIAYEICLQLDWEVPDAVVVPVGNAGNISAI WQGFLDLYRLGIIDELPRMYGVQAEGARPIVEAIRRGKEDIEPDPEPETVATAIRIGNPVNAIKALRAIRCSGGWAVEVS DEEILSAQRELATREGIFVEPASAASIAGLRKFVEEGEIDADERVVCVTTGHGLKDPETVMEVCELPEPVEPDPETIQRL IAE
Sequences:
>Translated_403_residues MHYVLECVECGSEFDDDSLVRCPECGGLLEVALRYDEIEVSRSTFEGRRLGVWAFRELLPVNTDDPVTMSEGGTGLHPCP RLGEELGVRELFVKNEGENPTGSFKDRGMTVGVTKAVELGAEVVACASTGNTSASLAAYAARAGLTCAVLLPAGKVALGK LAQALFHGARVIPVNGNFDDALDVVKKLADEGIVYILNSVNPFRLSGQRTIAYEICLQLDWEVPDAVVVPVGNAGNISAI WQGFLDLYRLGIIDELPRMYGVQAEGARPIVEAIRRGKEDIEPDPEPETVATAIRIGNPVNAIKALRAIRCSGGWAVEVS DEEILSAQRELATREGIFVEPASAASIAGLRKFVEEGEIDADERVVCVTTGHGLKDPETVMEVCELPEPVEPDPETIQRL IAE >Mature_403_residues MHYVLECVECGSEFDDDSLVRCPECGGLLEVALRYDEIEVSRSTFEGRRLGVWAFRELLPVNTDDPVTMSEGGTGLHPCP RLGEELGVRELFVKNEGENPTGSFKDRGMTVGVTKAVELGAEVVACASTGNTSASLAAYAARAGLTCAVLLPAGKVALGK LAQALFHGARVIPVNGNFDDALDVVKKLADEGIVYILNSVNPFRLSGQRTIAYEICLQLDWEVPDAVVVPVGNAGNISAI WQGFLDLYRLGIIDELPRMYGVQAEGARPIVEAIRRGKEDIEPDPEPETVATAIRIGNPVNAIKALRAIRCSGGWAVEVS DEEILSAQRELATREGIFVEPASAASIAGLRKFVEEGEIDADERVVCVTTGHGLKDPETVMEVCELPEPVEPDPETIQRL IAE
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 43383; Mature: 43383
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYVLECVECGSEFDDDSLVRCPECGGLLEVALRYDEIEVSRSTFEGRRLGVWAFRELLP CHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHEECHHHCCCCEEHHHHHHHHCC VNTDDPVTMSEGGTGLHPCPRLGEELGVRELFVKNEGENPTGSFKDRGMTVGVTKAVELG CCCCCCEEECCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCCCCCEEEEHHHHHHHC AEVVACASTGNTSASLAAYAARAGLTCAVLLPAGKVALGKLAQALFHGARVIPVNGNFDD CCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHH ALDVVKKLADEGIVYILNSVNPFRLSGQRTIAYEICLQLDWEVPDAVVVPVGNAGNISAI HHHHHHHHHCCCEEEEECCCCCEEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCHHHH WQGFLDLYRLGIIDELPRMYGVQAEGARPIVEAIRRGKEDIEPDPEPETVATAIRIGNPV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCHH NAIKALRAIRCSGGWAVEVSDEEILSAQRELATREGIFVEPASAASIAGLRKFVEEGEID HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCC ADERVVCVTTGHGLKDPETVMEVCELPEPVEPDPETIQRLIAE CCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MHYVLECVECGSEFDDDSLVRCPECGGLLEVALRYDEIEVSRSTFEGRRLGVWAFRELLP CHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHEECHHHCCCCEEHHHHHHHHCC VNTDDPVTMSEGGTGLHPCPRLGEELGVRELFVKNEGENPTGSFKDRGMTVGVTKAVELG CCCCCCEEECCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCCCCCEEEEHHHHHHHC AEVVACASTGNTSASLAAYAARAGLTCAVLLPAGKVALGKLAQALFHGARVIPVNGNFDD CCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHH ALDVVKKLADEGIVYILNSVNPFRLSGQRTIAYEICLQLDWEVPDAVVVPVGNAGNISAI HHHHHHHHHCCCEEEEECCCCCEEECCCEEEEEEEEEEECCCCCCEEEEECCCCCCHHHH WQGFLDLYRLGIIDELPRMYGVQAEGARPIVEAIRRGKEDIEPDPEPETVATAIRIGNPV HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCHH NAIKALRAIRCSGGWAVEVSDEEILSAQRELATREGIFVEPASAASIAGLRKFVEEGEID HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCC ADERVVCVTTGHGLKDPETVMEVCELPEPVEPDPETIQRLIAE CCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]