| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094408
Identifier: 20094408
GI number: 20094408
Start: 931280
End: 932956
Strand: Direct
Name: 20094408
Synonym: MK0972
Alternate gene names: NA
Gene position: 931280-932956 (Clockwise)
Preceding gene: 20094407
Following gene: 20094409
Centisome position: 54.94
GC content: 57.9
Gene sequence:
>1677_bases GTGGCGGTGTTCCACTACCCACACTGTGAAAACACCGCCTCCGGGATCACCGACGTGATTAAAGGACATCTCGGTCCCAA CGGGGCGATCGAGTTCGTCGGCGTACACGGCACTTCGCACTCGATCGCCGGACTCCCGGAGGACGTCCAGAAGATGGAAA TCCAGTACTGCTGGGAGTTCCTGGAGGATCAAGGGCTCGGACCCTATCTACGCAAGGACATAATCTCCCCGTCGCCCGAG TGGATCATGGACGACACGTTCGTCAAGGTCTGTCAGGAACTCGGGACCCGAGAGGTGGTCTGCGGCTACAGGACGTGGGA GCTCGACCCCGATAAGCACCCGCGGTGGTACGGTAAAGACTACGACTACATCGCGGATATCATGGTGATCAAGAAGCTGA ATACTAACGGGTACACCGTGTACGTCTGTCCGGTGATCGACTTCGAGGAGCTCGTAGGTGACGTAGTGGATGAACTGGGC GTCTACAATCTCAGTAACCTTAAGACCATGCTGCGGAAGGCCATCGAAACGCTGCGCAATACTGGCGCGATTCGCGACGG TAGCCACCTTATGATGTGGGTACTCATCCACCCGTGGCAGCTAACCGAAGATATACGCGTCGGCAGGAATGACAACACAA GACCAGGTATGGAATTGATCGAAGAGTTCATACAGTGGGTCAAGAAAGGTCAGCTGGACTATGAGGTGAATGGGATTAAC ATCAAGTTCGTACTCGAGAACCCGAGCGATGCAATACGGATCGAGAGGAACATCGAGCAGAACCCGACGGCCTACGGCCA TCCGATGGTGACCGTGACGAAATTGGACTGGGTCTCGATGATCAAGGCCAGCGGAGGTAAGACGGCCAGGGAATTGAAGC ATGATCACCAGAAGCTCGTCGACATCTGGGAGCGGGCGATGAAGAAGCTCCAGAAGGTCGCACCCCAGTTGTCGTCCCTG AGGCAGACGGTGGACAGGCTGGTCTACGACGTCGTGCTCAGGGCGACCAACGAGTTCAGGCTCAGCGTGATGGCGACGAA AGGGGACTTCTGGGGTACCAAGTACGATGCCACGCAGTACGTGCAAATGTGGGAGCGGGAGATCCAGATACTGGAGGGGG CTGATTCAGGGGACGATCCAGTACGTGGGAACCGAGTCGGTCCCGGGAGCCCAGGTGATGGTGTTCAAGCAGGACGATCA GACCATCAAGGTACTGTTCCCCGAGAACAGGTGGTACTTGTCACAGACTATCCTCACGGCGGGGCCTCTGAGCGCTCAGA AGACCGACTACGGGGCCGACTACGCGGTCCTGACGATCCGGTGTCCAGTGACCACCCAAGGATGGAAGATCACCGGCGGC GTGATCGTGATCAAGGACCAGAAGGGCAACGAGCTGGCCAGGGTGAGGTTCGGTCCCAACAACGTAGTGAACGGGGAGCT GGTCAAGGAGGTGAGGCTAGAGGGTCTCGGTTCGTACCCGCCGGAGTTCCAGGTAAGGATCGAGGTGGTGTTCGAGAGAC GCGAGACCTGGCGGACACCGAGTCAGACGATCACCCTGACGACGAGCGGTACCTCCACGGTCAGGCTAGCTCGGGCGTCG GTATCGGGCGAGCTCAAGGTGAAGGACATCTCGGGATTACAGGCGACGTTGGTGGTCAGTTACTCGGTGACCACTGA
Upstream 100 bases:
>100_bases AGTACATATCACGGTGTACAACGATTCGGACGCATGGGATCAATCACATATCCAAGCATATGATGAGTTCCTAACGCGGT GTGAGCAAAACGGTGTCAAG
Downstream 100 bases:
>100_bases GAACTGCGACGTCGAATCGGTCACGATCGAACTACTGCGTGACGGTCAGATGGTCGACAGGAAGACGGTGAGTTCTCCGC AAGGTTCTGTTGAATTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MAVFHYPHCENTASGITDVIKGHLGPNGAIEFVGVHGTSHSIAGLPEDVQKMEIQYCWEFLEDQGLGPYLRKDIISPSPE WIMDDTFVKVCQELGTREVVCGYRTWELDPDKHPRWYGKDYDYIADIMVIKKLNTNGYTVYVCPVIDFEELVGDVVDELG VYNLSNLKTMLRKAIETLRNTGAIRDGSHLMMWVLIHPWQLTEDIRVGRNDNTRPGMELIEEFIQWVKKGQLDYEVNGIN IKFVLENPSDAIRIERNIEQNPTAYGHPMVTVTKLDWVSMIKASGGKTARELKHDHQKLVDIWERAMKKLQKVAPQLSSL RQTVDRLVYDVVLRATNEFRLSVMATKGDFWGTKYDATQYVQMWEREIQILEGADSGDDPVRGNRVGPGSPGDGVQAGRS DHQGTVPREQVVLVTDYPHGGASERSEDRLRGRLRGPDDPVSSDHPRMEDHRRRDRDQGPEGQRAGQGEVRSQQRSERGA GQGGEARGSRFVPAGVPGKDRGGVRETRDLADTESDDHPDDERYLHGQASSGVGIGRAQGEGHLGITGDVGGQLLGDH
Sequences:
>Translated_558_residues MAVFHYPHCENTASGITDVIKGHLGPNGAIEFVGVHGTSHSIAGLPEDVQKMEIQYCWEFLEDQGLGPYLRKDIISPSPE WIMDDTFVKVCQELGTREVVCGYRTWELDPDKHPRWYGKDYDYIADIMVIKKLNTNGYTVYVCPVIDFEELVGDVVDELG VYNLSNLKTMLRKAIETLRNTGAIRDGSHLMMWVLIHPWQLTEDIRVGRNDNTRPGMELIEEFIQWVKKGQLDYEVNGIN IKFVLENPSDAIRIERNIEQNPTAYGHPMVTVTKLDWVSMIKASGGKTARELKHDHQKLVDIWERAMKKLQKVAPQLSSL RQTVDRLVYDVVLRATNEFRLSVMATKGDFWGTKYDATQYVQMWEREIQILEGADSGDDPVRGNRVGPGSPGDGVQAGRS DHQGTVPREQVVLVTDYPHGGASERSEDRLRGRLRGPDDPVSSDHPRMEDHRRRDRDQGPEGQRAGQGEVRSQQRSERGA GQGGEARGSRFVPAGVPGKDRGGVRETRDLADTESDDHPDDERYLHGQASSGVGIGRAQGEGHLGITGDVGGQLLGDH >Mature_557_residues AVFHYPHCENTASGITDVIKGHLGPNGAIEFVGVHGTSHSIAGLPEDVQKMEIQYCWEFLEDQGLGPYLRKDIISPSPEW IMDDTFVKVCQELGTREVVCGYRTWELDPDKHPRWYGKDYDYIADIMVIKKLNTNGYTVYVCPVIDFEELVGDVVDELGV YNLSNLKTMLRKAIETLRNTGAIRDGSHLMMWVLIHPWQLTEDIRVGRNDNTRPGMELIEEFIQWVKKGQLDYEVNGINI KFVLENPSDAIRIERNIEQNPTAYGHPMVTVTKLDWVSMIKASGGKTARELKHDHQKLVDIWERAMKKLQKVAPQLSSLR QTVDRLVYDVVLRATNEFRLSVMATKGDFWGTKYDATQYVQMWEREIQILEGADSGDDPVRGNRVGPGSPGDGVQAGRSD HQGTVPREQVVLVTDYPHGGASERSEDRLRGRLRGPDDPVSSDHPRMEDHRRRDRDQGPEGQRAGQGEVRSQQRSERGAG QGGEARGSRFVPAGVPGKDRGGVRETRDLADTESDDHPDDERYLHGQASSGVGIGRAQGEGHLGITGDVGGQLLGDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62493; Mature: 62362
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFHYPHCENTASGITDVIKGHLGPNGAIEFVGVHGTSHSIAGLPEDVQKMEIQYCWEF CCEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LEDQGLGPYLRKDIISPSPEWIMDDTFVKVCQELGTREVVCGYRTWELDPDKHPRWYGKD HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECEEEECCCCCCCCCCCCCC YDYIADIMVIKKLNTNGYTVYVCPVIDFEELVGDVVDELGVYNLSNLKTMLRKAIETLRN HHHHHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGAIRDGSHLMMWVLIHPWQLTEDIRVGRNDNTRPGMELIEEFIQWVKKGQLDYEVNGIN CCCCCCCCCEEEEEEECCHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEE IKFVLENPSDAIRIERNIEQNPTAYGHPMVTVTKLDWVSMIKASGGKTARELKHDHQKLV EEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH DIWERAMKKLQKVAPQLSSLRQTVDRLVYDVVLRATNEFRLSVMATKGDFWGTKYDATQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHH VQMWEREIQILEGADSGDDPVRGNRVGPGSPGDGVQAGRSDHQGTVPREQVVLVTDYPHG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC GASERSEDRLRGRLRGPDDPVSSDHPRMEDHRRRDRDQGPEGQRAGQGEVRSQQRSERGA CCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC GQGGEARGSRFVPAGVPGKDRGGVRETRDLADTESDDHPDDERYLHGQASSGVGIGRAQG CCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHEECCCCCCCCCCCCCCC EGHLGITGDVGGQLLGDH CCCEEEECCCCCCCCCCC >Mature Secondary Structure AVFHYPHCENTASGITDVIKGHLGPNGAIEFVGVHGTSHSIAGLPEDVQKMEIQYCWEF CEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LEDQGLGPYLRKDIISPSPEWIMDDTFVKVCQELGTREVVCGYRTWELDPDKHPRWYGKD HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECEEEECCCCCCCCCCCCCC YDYIADIMVIKKLNTNGYTVYVCPVIDFEELVGDVVDELGVYNLSNLKTMLRKAIETLRN HHHHHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TGAIRDGSHLMMWVLIHPWQLTEDIRVGRNDNTRPGMELIEEFIQWVKKGQLDYEVNGIN CCCCCCCCCEEEEEEECCHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEE IKFVLENPSDAIRIERNIEQNPTAYGHPMVTVTKLDWVSMIKASGGKTARELKHDHQKLV EEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH DIWERAMKKLQKVAPQLSSLRQTVDRLVYDVVLRATNEFRLSVMATKGDFWGTKYDATQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHH VQMWEREIQILEGADSGDDPVRGNRVGPGSPGDGVQAGRSDHQGTVPREQVVLVTDYPHG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC GASERSEDRLRGRLRGPDDPVSSDHPRMEDHRRRDRDQGPEGQRAGQGEVRSQQRSERGA CCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC GQGGEARGSRFVPAGVPGKDRGGVRETRDLADTESDDHPDDERYLHGQASSGVGIGRAQG CCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHEECCCCCCCCCCCCCCC EGHLGITGDVGGQLLGDH CCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA