Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094358
Identifier: 20094358
GI number: 20094358
Start: 880054
End: 881355
Strand: Direct
Name: 20094358
Synonym: MK0922
Alternate gene names: NA
Gene position: 880054-881355 (Clockwise)
Preceding gene: 20094357
Following gene: 20094360
Centisome position: 51.92
GC content: 62.52
Gene sequence:
>1302_bases TTGCCCGTCCACGCGGTCGTGGGCTTCGGGTACCCCAAGTACGACCCGGTGAGCTGGTTCGCGGAGCGTTCACTGATCGA GACACTGGAAGTGAAGACCGCGGAGTCCCGCTGCCTCGAGCTACGCGAGGGGTCGACTCTTCGCCTCGAGGCCCGGCGCC TCGGTAGGCGTGAGATGAGCGCGACCGCGCTGCTGGAACGCGTCGAAGAACCGGGAGAAGTCCACGTGTTCGCCTCGTCC TCGCTGAAGGGACAGACGGTCGATGGTGACACGGTGGAGGATCGTATGGGTGAGTACCTCGTCGATCCGTTGAACGATGT GGGGTTCGAGGTCGAGGTCCACTGGTCGTCGGCGTTCGATCCCCTGTCGCTCCTCCCCGAGCTCATCGACACCCTGACAC GTCTCGACGATCGCGTGGTGCTGGATCTTACCCACGGTGTTCGTATCCAGCCCGCGATCTCGGCCGTGGCGGGAATGGCG GCCGCTCGATTGCCGGGCTCAGATATGGAGCTCGTTCCGGTGTACGGGGCCGCAGGGGTTGAGGTGAGGGAGGTCCTGAG GTGGTCGGACGGTGCGGACGGGTCTCGCGGGATCATCCTGGACATCCGTCGCCACTTGGAGTCCGCCATGGCGTTCAACA AGGTCGTCGATTACACCTTGGATCCCTCCCGAGAACACCTCGAAGAGCTGTGCGAGCTGACTGAAAGCGCGCTTCGAGAG TTGGACGTCCCCGATGATCGACTGGAGAGAGTTCGGGAGCTAGTGATCGATGAAGGGGCTCTGAGAGGCCTCGCCGACGC CCTCCGGTCCAACTACCCGCGGAAGGTCGTGAAGGAGGCGAGAAAGTGGGAACCGAAGTCGCCCGAGGACGTACTCGACA GGCTTCATATAGAAAGTTCCGGGAGGGAGCGGGCCGAGAAGTACCTCCGTGCGCTCTCGAACTTCTTAGCAAGGGCCCTG AATCCGTTCCTTCAGGGTCTTGACTTACCGAAGTCTCCTTGGAAGGCGGCCGTACAGCTCGCCGAGTGGCTGTGTGATCG CGGTTACTACGCGGCCTCGGTTCTGCTGCTCCGAGAGCTCGTGTACCTCAGGACGGTCTACGAGTGGGCCGAGGAGCACG GCCACGGGGAGCTGAAGGAGGTCGTCGAAGAGTACCTCAGGGCCCTCATCGATCCGGACGCGAGAAAACCCAGGGGAGTC TACGACGAGTTGTGCAGCACCATCGAAGAGGTTACCGACGGGGAGGCCGGGGATCCCGACGATTTGGTCAGGAAGATCGA ACGGGAGATACTCAACCGATGA
Upstream 100 bases:
>100_bases TACTCTTCATCGGTCCGCGGCTTGCATGATCATCATCCCTGGTTCGAGGCGAATCTCCATCGATAAAACTTCGTCCCTCG TAGGGTCAGGAGGGCGTCAC
Downstream 100 bases:
>100_bases TCTCTTTCACTTTCTTCACCAGATTCTGTGCCTTCTCGTCTGGCCTCCCAACGTCTTCCCTTACGTGTGCGAATGAGTTA CGGACATCCCTGATTTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MPVHAVVGFGYPKYDPVSWFAERSLIETLEVKTAESRCLELREGSTLRLEARRLGRREMSATALLERVEEPGEVHVFASS SLKGQTVDGDTVEDRMGEYLVDPLNDVGFEVEVHWSSAFDPLSLLPELIDTLTRLDDRVVLDLTHGVRIQPAISAVAGMA AARLPGSDMELVPVYGAAGVEVREVLRWSDGADGSRGIILDIRRHLESAMAFNKVVDYTLDPSREHLEELCELTESALRE LDVPDDRLERVRELVIDEGALRGLADALRSNYPRKVVKEARKWEPKSPEDVLDRLHIESSGRERAEKYLRALSNFLARAL NPFLQGLDLPKSPWKAAVQLAEWLCDRGYYAASVLLLRELVYLRTVYEWAEEHGHGELKEVVEEYLRALIDPDARKPRGV YDELCSTIEEVTDGEAGDPDDLVRKIEREILNR
Sequences:
>Translated_433_residues MPVHAVVGFGYPKYDPVSWFAERSLIETLEVKTAESRCLELREGSTLRLEARRLGRREMSATALLERVEEPGEVHVFASS SLKGQTVDGDTVEDRMGEYLVDPLNDVGFEVEVHWSSAFDPLSLLPELIDTLTRLDDRVVLDLTHGVRIQPAISAVAGMA AARLPGSDMELVPVYGAAGVEVREVLRWSDGADGSRGIILDIRRHLESAMAFNKVVDYTLDPSREHLEELCELTESALRE LDVPDDRLERVRELVIDEGALRGLADALRSNYPRKVVKEARKWEPKSPEDVLDRLHIESSGRERAEKYLRALSNFLARAL NPFLQGLDLPKSPWKAAVQLAEWLCDRGYYAASVLLLRELVYLRTVYEWAEEHGHGELKEVVEEYLRALIDPDARKPRGV YDELCSTIEEVTDGEAGDPDDLVRKIEREILNR >Mature_432_residues PVHAVVGFGYPKYDPVSWFAERSLIETLEVKTAESRCLELREGSTLRLEARRLGRREMSATALLERVEEPGEVHVFASSS LKGQTVDGDTVEDRMGEYLVDPLNDVGFEVEVHWSSAFDPLSLLPELIDTLTRLDDRVVLDLTHGVRIQPAISAVAGMAA ARLPGSDMELVPVYGAAGVEVREVLRWSDGADGSRGIILDIRRHLESAMAFNKVVDYTLDPSREHLEELCELTESALREL DVPDDRLERVRELVIDEGALRGLADALRSNYPRKVVKEARKWEPKSPEDVLDRLHIESSGRERAEKYLRALSNFLARALN PFLQGLDLPKSPWKAAVQLAEWLCDRGYYAASVLLLRELVYLRTVYEWAEEHGHGELKEVVEEYLRALIDPDARKPRGVY DELCSTIEEVTDGEAGDPDDLVRKIEREILNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48878; Mature: 48747
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVHAVVGFGYPKYDPVSWFAERSLIETLEVKTAESRCLELREGSTLRLEARRLGRREMS CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHH ATALLERVEEPGEVHVFASSSLKGQTVDGDTVEDRMGEYLVDPLNDVGFEVEVHWSSAFD HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCCC PLSLLPELIDTLTRLDDRVVLDLTHGVRIQPAISAVAGMAAARLPGSDMELVPVYGAAGV HHHHHHHHHHHHHHCCCCEEEEECCCCEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCH EVREVLRWSDGADGSRGIILDIRRHLESAMAFNKVVDYTLDPSREHLEELCELTESALRE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LDVPDDRLERVRELVIDEGALRGLADALRSNYPRKVVKEARKWEPKSPEDVLDRLHIESS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC GRERAEKYLRALSNFLARALNPFLQGLDLPKSPWKAAVQLAEWLCDRGYYAASVLLLREL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH VYLRTVYEWAEEHGHGELKEVVEEYLRALIDPDARKPRGVYDELCSTIEEVTDGEAGDPD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH DLVRKIEREILNR HHHHHHHHHHHCC >Mature Secondary Structure PVHAVVGFGYPKYDPVSWFAERSLIETLEVKTAESRCLELREGSTLRLEARRLGRREMS CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHH ATALLERVEEPGEVHVFASSSLKGQTVDGDTVEDRMGEYLVDPLNDVGFEVEVHWSSAFD HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCCC PLSLLPELIDTLTRLDDRVVLDLTHGVRIQPAISAVAGMAAARLPGSDMELVPVYGAAGV HHHHHHHHHHHHHHCCCCEEEEECCCCEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCH EVREVLRWSDGADGSRGIILDIRRHLESAMAFNKVVDYTLDPSREHLEELCELTESALRE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LDVPDDRLERVRELVIDEGALRGLADALRSNYPRKVVKEARKWEPKSPEDVLDRLHIESS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC GRERAEKYLRALSNFLARALNPFLQGLDLPKSPWKAAVQLAEWLCDRGYYAASVLLLREL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH VYLRTVYEWAEEHGHGELKEVVEEYLRALIDPDARKPRGVYDELCSTIEEVTDGEAGDPD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH DLVRKIEREILNR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA