| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094360
Identifier: 20094360
GI number: 20094360
Start: 882370
End: 883326
Strand: Direct
Name: 20094360
Synonym: MK0924
Alternate gene names: NA
Gene position: 882370-883326 (Clockwise)
Preceding gene: 20094358
Following gene: 20094362
Centisome position: 52.06
GC content: 61.02
Gene sequence:
>957_bases CTGGGGACAGCTGGAAGATTTGGCGGGTGGTGGAGATCCAGAATACGTCCTCCTAAACGTCCTCGACGCACTGGGGAGGT GAGGCGACTGAGTTGGGTCCTAGAGATGATCAGGACGCTTCTGTGCATGTATGTAGGGGTTCTGATCGCGTCTTACTTAG GGTCCTCCGAAGCGTGTACCCGGTCGTTGCTCCGCGTACTGAAGCCTGTGGTCGGGTCCGGCCTCTACGGTCACGCCGCG TCGCTATCGGCCCTGAGTTCCTCTGTGGCGCTTTACGCGGCTCAGGACAAGGTGAACTCCACCAGAGAGGCCGTGGGTTT ACTGCTCCTCCTGGCCTTCCCGACTTCCGTAGCGACGGTCCTTCAGTTTTACCTCCCCGTGGTCGTACCCGCCGTGGGCC CGGCGGGTCTCCTTATGATCGGCATATCGGTCGTGGGCGCCCTACTCACTTCCGCGTTCGGCCGTGTTCTACTACCTGGC CGTGAAGATGGTGATGGGCCGAGTAAGATCACGCTCGTGCGGAACCCTTGGCGCACTGCCCATAGTGTGTTCCTCAGGGT TGGGCCCGCCGTCGCCTTGGCGATGGTGGCGGTTAAGCTGGGTGAGGGGTACGGCGTGACGGAGTGGGTCGAGAGATTTC TTCACCCGTTGACTAGGTCCGTTGGACTCCCTTCGGACGCGTCTCTGGTGGTGTTCGGGTGTCTGATCAACGTGGCCGTA GGTGCCGCCTTAGGGGCAGATCTCTGGGCGTCCGGGAAGCTGCGGATGGAGGATCTGGCGCTCGCGTTGGCGTTCGGTAG GGCCCTTTCTTTGCCGAGGATTAACCTTCAGTTCCTGTTTCCTCCTGCCGTCACGTTCCTTGGCAAGAAGGGGTTGCTCG GGGCGACCGTCCGCACGCTCGTCGAGACCTTGGCGAACATATCGGTGGTACTGGCACTAACGGCGTTTGTTCACTAG
Upstream 100 bases:
>100_bases GACACGGGGTGCTGGTCAGGCGGACCCGATCGACGTGTGAGGTGGAGATCCTCGTCACGGTAACGGATCTCGATCGGGTC GTCCGGAAGGCGGGAAGGAT
Downstream 100 bases:
>100_bases GGCCCTGTTTTTTCGTCGGGGTTTCCTTCGGCTCGTACCCGGCCGCCCAGATCAGGGCGCGCGCCAGTAGCTTCCAGGCT CCCGTGCGTTCGGTCAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MGTAGRFGGWWRSRIRPPKRPRRTGEVRRLSWVLEMIRTLLCMYVGVLIASYLGSSEACTRSLLRVLKPVVGSGLYGHAA SLSALSSSVALYAAQDKVNSTREAVGLLLLLAFPTSVATVLQFYLPVVVPAVGPAGLLMIGISVVGALLTSAFGRVLLPG REDGDGPSKITLVRNPWRTAHSVFLRVGPAVALAMVAVKLGEGYGVTEWVERFLHPLTRSVGLPSDASLVVFGCLINVAV GAALGADLWASGKLRMEDLALALAFGRALSLPRINLQFLFPPAVTFLGKKGLLGATVRTLVETLANISVVLALTAFVH
Sequences:
>Translated_318_residues MGTAGRFGGWWRSRIRPPKRPRRTGEVRRLSWVLEMIRTLLCMYVGVLIASYLGSSEACTRSLLRVLKPVVGSGLYGHAA SLSALSSSVALYAAQDKVNSTREAVGLLLLLAFPTSVATVLQFYLPVVVPAVGPAGLLMIGISVVGALLTSAFGRVLLPG REDGDGPSKITLVRNPWRTAHSVFLRVGPAVALAMVAVKLGEGYGVTEWVERFLHPLTRSVGLPSDASLVVFGCLINVAV GAALGADLWASGKLRMEDLALALAFGRALSLPRINLQFLFPPAVTFLGKKGLLGATVRTLVETLANISVVLALTAFVH >Mature_317_residues GTAGRFGGWWRSRIRPPKRPRRTGEVRRLSWVLEMIRTLLCMYVGVLIASYLGSSEACTRSLLRVLKPVVGSGLYGHAAS LSALSSSVALYAAQDKVNSTREAVGLLLLLAFPTSVATVLQFYLPVVVPAVGPAGLLMIGISVVGALLTSAFGRVLLPGR EDGDGPSKITLVRNPWRTAHSVFLRVGPAVALAMVAVKLGEGYGVTEWVERFLHPLTRSVGLPSDASLVVFGCLINVAVG AALGADLWASGKLRMEDLALALAFGRALSLPRINLQFLFPPAVTFLGKKGLLGATVRTLVETLANISVVLALTAFVH
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33750; Mature: 33619
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAGRFGGWWRSRIRPPKRPRRTGEVRRLSWVLEMIRTLLCMYVGVLIASYLGSSEACT CCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSLLRVLKPVVGSGLYGHAASLSALSSSVALYAAQDKVNSTREAVGLLLLLAFPTSVATV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFYLPVVVPAVGPAGLLMIGISVVGALLTSAFGRVLLPGREDGDGPSKITLVRNPWRTA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEECCHHHH HSVFLRVGPAVALAMVAVKLGEGYGVTEWVERFLHPLTRSVGLPSDASLVVFGCLINVAV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GAALGADLWASGKLRMEDLALALAFGRALSLPRINLQFLFPPAVTFLGKKGLLGATVRTL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCHHHHHHHH VETLANISVVLALTAFVH HHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTAGRFGGWWRSRIRPPKRPRRTGEVRRLSWVLEMIRTLLCMYVGVLIASYLGSSEACT CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSLLRVLKPVVGSGLYGHAASLSALSSSVALYAAQDKVNSTREAVGLLLLLAFPTSVATV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFYLPVVVPAVGPAGLLMIGISVVGALLTSAFGRVLLPGREDGDGPSKITLVRNPWRTA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEECCHHHH HSVFLRVGPAVALAMVAVKLGEGYGVTEWVERFLHPLTRSVGLPSDASLVVFGCLINVAV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GAALGADLWASGKLRMEDLALALAFGRALSLPRINLQFLFPPAVTFLGKKGLLGATVRTL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCHHHHHHHH VETLANISVVLALTAFVH HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA