Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094348
Identifier: 20094348
GI number: 20094348
Start: 868674
End: 869447
Strand: Direct
Name: 20094348
Synonym: MK0912
Alternate gene names: NA
Gene position: 868674-869447 (Clockwise)
Preceding gene: 20094345
Following gene: 20094349
Centisome position: 51.25
GC content: 52.07
Gene sequence:
>774_bases TTGTCGTCAGACCCACGACGTCCAACCAAGGTACCCTGGGTGAAGGCGATGGTTATCGGACTAATCGCGGTAATGAGCGC GAAGGCATTGTTTCACGAGTGGGTAGTTGCCACACTCCATCCCACGAACAAGGACCGTCTAGTAATGAAGGTCGAACGCG TACCATGCCGTACCGGGGACGATCTACGGCCGGGAAATGTCGAAGTATACGCTAAGGTATACGGATGTACCAAGTACGCT ACACTCGGGTACGGATCTCAAGATCCCCGTCGGATCCTCGTACCCGCGCTCCCACCACGGCTCATGTCACTAACCGTAAC GGTTGCTGGCAACGTGATTCGGGTGTTCAGAACGTGTTTTCCCGCCCCGTTTATCATAGTAACCGCGACTAAATTACCCC GAATTTCCGTAAACCAGTACGAGATTCGAATACATTCACCTTGTAAGATTCTACTCCAACCTACCGTCACGGGGCTACTG AAGTACTTCCCTCCAGTGTTCATAACTGACGGAAAGTCTACGAGGAATCCTACCCATCTCACGTGCCGAAATGTCGCAAT CATCATGCCGTACGCGCTCACAGTGATGGGTGGATTAACTCCAATCGACGTAGTATCTGTCGTCTCAGTGTCCGGTGAAC GGCTAGTCGTCAACGCCTCTTCAGTATACGCTCCTAAGGGGGTCACAATTAAGTGGGAGCCTATCTGTCCTCTCATTTGG ACCACTTACGCGGACATAGTTTGGAGATGGCCGTACTGGCCATACTCACTGTGA
Upstream 100 bases:
>100_bases GGCCGCGGTGTTCACGTTTCGGACATTTCTCGGAAGTTGAGATAACGAGACTACGGGTGCCCGGCGCGAGTGGCGTTTCG TCCCTTCAGGGGGCCGAGGA
Downstream 100 bases:
>100_bases CAGCCCTCGTGATAATTCCGGAGGACGTCCCTACCATCCCTTATGTGTCGCTTATATCGATATCTTCAATCAAAGCGGCA CACGACAGCCTACGTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSSDPRRPTKVPWVKAMVIGLIAVMSAKALFHEWVVATLHPTNKDRLVMKVERVPCRTGDDLRPGNVEVYAKVYGCTKYA TLGYGSQDPRRILVPALPPRLMSLTVTVAGNVIRVFRTCFPAPFIIVTATKLPRISVNQYEIRIHSPCKILLQPTVTGLL KYFPPVFITDGKSTRNPTHLTCRNVAIIMPYALTVMGGLTPIDVVSVVSVSGERLVVNASSVYAPKGVTIKWEPICPLIW TTYADIVWRWPYWPYSL
Sequences:
>Translated_257_residues MSSDPRRPTKVPWVKAMVIGLIAVMSAKALFHEWVVATLHPTNKDRLVMKVERVPCRTGDDLRPGNVEVYAKVYGCTKYA TLGYGSQDPRRILVPALPPRLMSLTVTVAGNVIRVFRTCFPAPFIIVTATKLPRISVNQYEIRIHSPCKILLQPTVTGLL KYFPPVFITDGKSTRNPTHLTCRNVAIIMPYALTVMGGLTPIDVVSVVSVSGERLVVNASSVYAPKGVTIKWEPICPLIW TTYADIVWRWPYWPYSL >Mature_256_residues SSDPRRPTKVPWVKAMVIGLIAVMSAKALFHEWVVATLHPTNKDRLVMKVERVPCRTGDDLRPGNVEVYAKVYGCTKYAT LGYGSQDPRRILVPALPPRLMSLTVTVAGNVIRVFRTCFPAPFIIVTATKLPRISVNQYEIRIHSPCKILLQPTVTGLLK YFPPVFITDGKSTRNPTHLTCRNVAIIMPYALTVMGGLTPIDVVSVVSVSGERLVVNASSVYAPKGVTIKWEPICPLIWT TYADIVWRWPYWPYSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28720; Mature: 28589
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDPRRPTKVPWVKAMVIGLIAVMSAKALFHEWVVATLHPTNKDRLVMKVERVPCRTGD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCC DLRPGNVEVYAKVYGCTKYATLGYGSQDPRRILVPALPPRLMSLTVTVAGNVIRVFRTCF CCCCCCEEEEEEEECCEEEEECCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHC PAPFIIVTATKLPRISVNQYEIRIHSPCKILLQPTVTGLLKYFPPVFITDGKSTRNPTHL CCCEEEEEECCCCEEECCEEEEEEECCEEEEECHHHHHHHHHCCCEEEECCCCCCCCCEE TCRNVAIIMPYALTVMGGLTPIDVVSVVSVSGERLVVNASSVYAPKGVTIKWEPICPLIW EECCEEEEHHHHHHHHCCCCHHHHHHHEECCCCEEEEECCCEECCCCCEEEECCCCCHHH TTYADIVWRWPYWPYSL HHHHHHEEECCCCCCCC >Mature Secondary Structure SSDPRRPTKVPWVKAMVIGLIAVMSAKALFHEWVVATLHPTNKDRLVMKVERVPCRTGD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCC DLRPGNVEVYAKVYGCTKYATLGYGSQDPRRILVPALPPRLMSLTVTVAGNVIRVFRTCF CCCCCCEEEEEEEECCEEEEECCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHC PAPFIIVTATKLPRISVNQYEIRIHSPCKILLQPTVTGLLKYFPPVFITDGKSTRNPTHL CCCEEEEEECCCCEEECCEEEEEEECCEEEEECHHHHHHHHHCCCEEEECCCCCCCCCEE TCRNVAIIMPYALTVMGGLTPIDVVSVVSVSGERLVVNASSVYAPKGVTIKWEPICPLIW EECCEEEEHHHHHHHHCCCCHHHHHHHEECCCCEEEEECCCEECCCCCEEEECCCCCHHH TTYADIVWRWPYWPYSL HHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA