Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094345
Identifier: 20094345
GI number: 20094345
Start: 863512
End: 864411
Strand: Direct
Name: 20094345
Synonym: MK0909
Alternate gene names: NA
Gene position: 863512-864411 (Clockwise)
Preceding gene: 20094342
Following gene: 20094348
Centisome position: 50.95
GC content: 59.78
Gene sequence:
>900_bases TTGTGTGACGCACGGAGGGGGTGTTCGACGCTGGGACTGCTGGATTCGTTGCTCGGTGGAGGAGATGAAGGGTCCGGGGA GGCCGAGGTGCGGGAAGTGCGGGATGAGGTCATCGAAGTGGAGCTCATCCGAGGCCCGGTGTACTTCAAGAACGACAGTA TCATCGCGGCTCGGGGCGACCTGGAATTCTTGGCGACCAAGCCGGTTCGCTCGTCCGGAGGGATCACGGGACTCCTTGAG AAGGTGCTCAAGGCGAAGCTGCTCGGTCTGAGACGGTACTTCGTGAAAGTCGATGGGTCGGGAGTGTTGTACGCGGGTGA CGGCGGTAAAGTCAAGGTGCTGGAGGTACCGGAGGGTGAGACCGTCACCGTGAACCAGGATCGGCTGCTCTTCACGACTA CTCCGGCCGACGTGGCGGCTCAACTCGATGCGAGCGTGCTCAGTACAGGGCTCATCGACATGGGATTCGAGGGCCCCTGC AAGATCGTGGTCACAGCGGAGTGTGATCCCGTGACAGTCGAGGTGGACGGAGGTCCTGTCTACGTCGATCCGGAGTGTTT GATAGCTTGGACCGGTGATCTGACGTTCTCCGCGACCTGGAAGGGAAGCGCGTTCGACTTCTTGCTAGGCCGGGAGCACG GGGAGGAGTTCCTGCTCGAAGCGCACGGTTACGGGAAAGTTCTAGTGGCTCCGTACGACGAGAGGATTAGACGGTTGGAG CGTATGATCCGTCGTGCCGGTGCAAGAGGAGGTGGCGTCGTCGGTGGAGGCGAGAACTACGGGGAAGAATACGGAGAAGA ATATGAAGAGTATGAAGAGTCGTCGGATGAGGGTGGGCTGTTCGACGACCTCTTCGACTTCGACTTTGACACCGACGACT TCGACCTCGACTTCGACTGA
Upstream 100 bases:
>100_bases GTCGGACCGGTGGGGACTTAACGGCTATCTCTCCGTACATTACCAAGCACTCCACGAGGGTTACCCCGACTGGGTCCGGC CAGGACGGACGCTTTGGAGG
Downstream 100 bases:
>100_bases CCTCCCTCCCCCGCGGCCTATTGTTATTAATTCCATAACGATCTCGGATGGGGCCGCGGCCGGGATTTGAACCCGGGGCC ACCGGCTCCACAGGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MCDARRGCSTLGLLDSLLGGGDEGSGEAEVREVRDEVIEVELIRGPVYFKNDSIIAARGDLEFLATKPVRSSGGITGLLE KVLKAKLLGLRRYFVKVDGSGVLYAGDGGKVKVLEVPEGETVTVNQDRLLFTTTPADVAAQLDASVLSTGLIDMGFEGPC KIVVTAECDPVTVEVDGGPVYVDPECLIAWTGDLTFSATWKGSAFDFLLGREHGEEFLLEAHGYGKVLVAPYDERIRRLE RMIRRAGARGGGVVGGGENYGEEYGEEYEEYEESSDEGGLFDDLFDFDFDTDDFDLDFD
Sequences:
>Translated_299_residues MCDARRGCSTLGLLDSLLGGGDEGSGEAEVREVRDEVIEVELIRGPVYFKNDSIIAARGDLEFLATKPVRSSGGITGLLE KVLKAKLLGLRRYFVKVDGSGVLYAGDGGKVKVLEVPEGETVTVNQDRLLFTTTPADVAAQLDASVLSTGLIDMGFEGPC KIVVTAECDPVTVEVDGGPVYVDPECLIAWTGDLTFSATWKGSAFDFLLGREHGEEFLLEAHGYGKVLVAPYDERIRRLE RMIRRAGARGGGVVGGGENYGEEYGEEYEEYEESSDEGGLFDDLFDFDFDTDDFDLDFD >Mature_299_residues MCDARRGCSTLGLLDSLLGGGDEGSGEAEVREVRDEVIEVELIRGPVYFKNDSIIAARGDLEFLATKPVRSSGGITGLLE KVLKAKLLGLRRYFVKVDGSGVLYAGDGGKVKVLEVPEGETVTVNQDRLLFTTTPADVAAQLDASVLSTGLIDMGFEGPC KIVVTAECDPVTVEVDGGPVYVDPECLIAWTGDLTFSATWKGSAFDFLLGREHGEEFLLEAHGYGKVLVAPYDERIRRLE RMIRRAGARGGGVVGGGENYGEEYGEEYEEYEESSDEGGLFDDLFDFDFDTDDFDLDFD
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32444; Mature: 32444
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDARRGCSTLGLLDSLLGGGDEGSGEAEVREVRDEVIEVELIRGPVYFKNDSIIAARGD CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCEEEECCCEEEECCC LEFLATKPVRSSGGITGLLEKVLKAKLLGLRRYFVKVDGSGVLYAGDGGKVKVLEVPEGE EEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCEEEEEECCCCC TVTVNQDRLLFTTTPADVAAQLDASVLSTGLIDMGFEGPCKIVVTAECDPVTVEVDGGPV EEEECCCEEEEEECCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCEEEEEECCCEE YVDPECLIAWTGDLTFSATWKGSAFDFLLGREHGEEFLLEAHGYGKVLVAPYDERIRRLE EECCCEEEEEECCEEEEEEECCCCEEEEHCCCCCCEEEEEECCCCEEEECCHHHHHHHHH RMIRRAGARGGGVVGGGENYGEEYGEEYEEYEESSDEGGLFDDLFDFDFDTDDFDLDFD HHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECCC >Mature Secondary Structure MCDARRGCSTLGLLDSLLGGGDEGSGEAEVREVRDEVIEVELIRGPVYFKNDSIIAARGD CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCEEEECCCEEEECCC LEFLATKPVRSSGGITGLLEKVLKAKLLGLRRYFVKVDGSGVLYAGDGGKVKVLEVPEGE EEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCEEEEEECCCCC TVTVNQDRLLFTTTPADVAAQLDASVLSTGLIDMGFEGPCKIVVTAECDPVTVEVDGGPV EEEECCCEEEEEECCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCEEEEEECCCEE YVDPECLIAWTGDLTFSATWKGSAFDFLLGREHGEEFLLEAHGYGKVLVAPYDERIRRLE EECCCEEEEEECCEEEEEEECCCCEEEEHCCCCCCEEEEEECCCCEEEECCHHHHHHHHH RMIRRAGARGGGVVGGGENYGEEYGEEYEEYEESSDEGGLFDDLFDFDFDTDDFDLDFD HHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA