Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094349
Identifier: 20094349
GI number: 20094349
Start: 869366
End: 870883
Strand: Direct
Name: 20094349
Synonym: MK0913
Alternate gene names: NA
Gene position: 869366-870883 (Clockwise)
Preceding gene: 20094348
Following gene: 20094356
Centisome position: 51.29
GC content: 52.11
Gene sequence:
>1518_bases GTGGGAGCCTATCTGTCCTCTCATTTGGACCACTTACGCGGACATAGTTTGGAGATGGCCGTACTGGCCATACTCACTGT GACAGCCCTCGTGATAATTCCGGAGGACGTCCCTACCATCCCTTATGTGTCGCTTATATCGATATCTTCAATCAAAGCGG CACACGACAGCCTACGTTCGGGAGAGCTACCACAGTGGAATCCATACCTTGGTGGTGGTTTCCCTTTAGCCCCGACTCCG TACTACCTCCTCCACGCGCTCGGTAGAACGGGGTTGATAATAGCAATATTACTGTTATCGGTTTTAGTTCTATTACTAGC ATCAAATGTAAACAATATGTTGCGCGTGGTGATAACATTACCGGCAGTATTATTGTCCTTGATCATTCCCTCTCCGTTAC CACTGATATTGGCTTCATACGCGCTAGGTTTCATCGGGAACAACCCGCTGTTGAGAACCGTTGGTTCCATAGGGATACCT GACGTGGCGCTGAGCATCGAGCTGGGGATCCGAAACCCTTCGCTCCCGGTGCTACTGGCCTCATCTGCGTGCCTCGTGGA TTGCCTCGTGGCCACCTTCGGCGCTGTCCCGTTGTTGACCTCACGTCCGGGTCCTATCCCTCTTCTATTAATTCTGTTAA TAACTGTAGTGGCCATCCTACCAGCACTGATGGCTCTAGCAATGCTGGGTAGAATCTACCCGGACTACCGCTGGAAGTTT TCGGGAATTACCGCCATTATTCTCTTCGGAGTTCAAACGTACCTACATGAGCTTCCAACAGCCTTAGCAACCCCAATAAT ACTATTTTCTTTACTTGTTCTCAAAAATTTTAACACTCATCTTGATAGGCGAATCTCAGTAAGATTAAACAGAGTCTCGA AACCACTGCGATTCCTAACTGCTTTAATGTTAGTCCTATTCTTCATCGTGATCTGTAGCGTCCTCGCTACCCCACGTTTC GCCGTGGTAGGATACAAAGTAGTGGGGTCCAGGACGGGAATGGAATACATCATTTCCTCCGATCCGTGGTTCTCTGAGTG CGTTAAGCGTGTGCTCTCCGGCCATCCAATCTGGAACACTCCCCTACCGACGGACCCTCATATGGGCCCCGCCTCCCTGC TAGGTTACGAACTAGGAGATCCACGGGCCGTCCCTCCTCTCTATCCCACGAAGCAGCTCGAGGTCCAACCGAGAGTGGTA GCACCACTCATTTCTTCACCATCGAGCTGGGCCGAAACCTCTCTTCACGCTCTTCAGCTGGCGGAGGCGGTCGCCTCACG TGGGGCCTCTGTCGGAGAACCTCGACTCAACACTCCCACCGAGATCCGCGGGTACGGGTTGGTGGGTCAGGTCTACGATC TCTGGTGGAAGGGAGGTACTCATAGGGGTCTTCTCCTGCAAGTAAACGGTCGGGCCGTTTACGAGCGACCTTCAGCTTGG CCCTCAGTGGTTCTGACGCTGATGAGTATCGCAGTGGCGGCTATTGAGACGGCTAAGAGAAAGAGCGACACTGTGTAA
Upstream 100 bases:
>100_bases GATTAACTCCAATCGACGTAGTATCTGTCGTCTCAGTGTCCGGTGAACGGCTAGTCGTCAACGCCTCTTCAGTATACGCT CCTAAGGGGGTCACAATTAA
Downstream 100 bases:
>100_bases GCTCGGCTTTGGTGTCGTTCCCATGCCACGTAGTGTAGTGTGGTGTGTTTTCCGTCGGTCTTGACGAGCATGTAGGGGCC GATGGGACAGGTTTGACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MGAYLSSHLDHLRGHSLEMAVLAILTVTALVIIPEDVPTIPYVSLISISSIKAAHDSLRSGELPQWNPYLGGGFPLAPTP YYLLHALGRTGLIIAILLLSVLVLLLASNVNNMLRVVITLPAVLLSLIIPSPLPLILASYALGFIGNNPLLRTVGSIGIP DVALSIELGIRNPSLPVLLASSACLVDCLVATFGAVPLLTSRPGPIPLLLILLITVVAILPALMALAMLGRIYPDYRWKF SGITAIILFGVQTYLHELPTALATPIILFSLLVLKNFNTHLDRRISVRLNRVSKPLRFLTALMLVLFFIVICSVLATPRF AVVGYKVVGSRTGMEYIISSDPWFSECVKRVLSGHPIWNTPLPTDPHMGPASLLGYELGDPRAVPPLYPTKQLEVQPRVV APLISSPSSWAETSLHALQLAEAVASRGASVGEPRLNTPTEIRGYGLVGQVYDLWWKGGTHRGLLLQVNGRAVYERPSAW PSVVLTLMSIAVAAIETAKRKSDTV
Sequences:
>Translated_505_residues MGAYLSSHLDHLRGHSLEMAVLAILTVTALVIIPEDVPTIPYVSLISISSIKAAHDSLRSGELPQWNPYLGGGFPLAPTP YYLLHALGRTGLIIAILLLSVLVLLLASNVNNMLRVVITLPAVLLSLIIPSPLPLILASYALGFIGNNPLLRTVGSIGIP DVALSIELGIRNPSLPVLLASSACLVDCLVATFGAVPLLTSRPGPIPLLLILLITVVAILPALMALAMLGRIYPDYRWKF SGITAIILFGVQTYLHELPTALATPIILFSLLVLKNFNTHLDRRISVRLNRVSKPLRFLTALMLVLFFIVICSVLATPRF AVVGYKVVGSRTGMEYIISSDPWFSECVKRVLSGHPIWNTPLPTDPHMGPASLLGYELGDPRAVPPLYPTKQLEVQPRVV APLISSPSSWAETSLHALQLAEAVASRGASVGEPRLNTPTEIRGYGLVGQVYDLWWKGGTHRGLLLQVNGRAVYERPSAW PSVVLTLMSIAVAAIETAKRKSDTV >Mature_504_residues GAYLSSHLDHLRGHSLEMAVLAILTVTALVIIPEDVPTIPYVSLISISSIKAAHDSLRSGELPQWNPYLGGGFPLAPTPY YLLHALGRTGLIIAILLLSVLVLLLASNVNNMLRVVITLPAVLLSLIIPSPLPLILASYALGFIGNNPLLRTVGSIGIPD VALSIELGIRNPSLPVLLASSACLVDCLVATFGAVPLLTSRPGPIPLLLILLITVVAILPALMALAMLGRIYPDYRWKFS GITAIILFGVQTYLHELPTALATPIILFSLLVLKNFNTHLDRRISVRLNRVSKPLRFLTALMLVLFFIVICSVLATPRFA VVGYKVVGSRTGMEYIISSDPWFSECVKRVLSGHPIWNTPLPTDPHMGPASLLGYELGDPRAVPPLYPTKQLEVQPRVVA PLISSPSSWAETSLHALQLAEAVASRGASVGEPRLNTPTEIRGYGLVGQVYDLWWKGGTHRGLLLQVNGRAVYERPSAWP SVVLTLMSIAVAAIETAKRKSDTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54507; Mature: 54375
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAYLSSHLDHLRGHSLEMAVLAILTVTALVIIPEDVPTIPYVSLISISSIKAAHDSLRS CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCC GELPQWNPYLGGGFPLAPTPYYLLHALGRTGLIIAILLLSVLVLLLASNVNNMLRVVITL CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH PAVLLSLIIPSPLPLILASYALGFIGNNPLLRTVGSIGIPDVALSIELGIRNPSLPVLLA HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEC SSACLVDCLVATFGAVPLLTSRPGPIPLLLILLITVVAILPALMALAMLGRIYPDYRWKF CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SGITAIILFGVQTYLHELPTALATPIILFSLLVLKNFNTHLDRRISVRLNRVSKPLRFLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALMLVLFFIVICSVLATPRFAVVGYKVVGSRTGMEYIISSDPWFSECVKRVLSGHPIWNT HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC PLPTDPHMGPASLLGYELGDPRAVPPLYPTKQLEVQPRVVAPLISSPSSWAETSLHALQL CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH AEAVASRGASVGEPRLNTPTEIRGYGLVGQVYDLWWKGGTHRGLLLQVNGRAVYERPSAW HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCH PSVVLTLMSIAVAAIETAKRKSDTV HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GAYLSSHLDHLRGHSLEMAVLAILTVTALVIIPEDVPTIPYVSLISISSIKAAHDSLRS CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCC GELPQWNPYLGGGFPLAPTPYYLLHALGRTGLIIAILLLSVLVLLLASNVNNMLRVVITL CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH PAVLLSLIIPSPLPLILASYALGFIGNNPLLRTVGSIGIPDVALSIELGIRNPSLPVLLA HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEC SSACLVDCLVATFGAVPLLTSRPGPIPLLLILLITVVAILPALMALAMLGRIYPDYRWKF CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SGITAIILFGVQTYLHELPTALATPIILFSLLVLKNFNTHLDRRISVRLNRVSKPLRFLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALMLVLFFIVICSVLATPRFAVVGYKVVGSRTGMEYIISSDPWFSECVKRVLSGHPIWNT HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCC PLPTDPHMGPASLLGYELGDPRAVPPLYPTKQLEVQPRVVAPLISSPSSWAETSLHALQL CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH AEAVASRGASVGEPRLNTPTEIRGYGLVGQVYDLWWKGGTHRGLLLQVNGRAVYERPSAW HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCH PSVVLTLMSIAVAAIETAKRKSDTV HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA