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The map label for this gene is 20094342

Identifier: 20094342

GI number: 20094342

Start: 860186

End: 860890

Strand: Direct

Name: 20094342

Synonym: MK0906

Alternate gene names: NA

Gene position: 860186-860890 (Clockwise)

Preceding gene: 20094341

Following gene: 20094345

Centisome position: 50.75

GC content: 60.43

Gene sequence:

>705_bases
TTGACCCGAAGATGGTACCTGTGTTGTTCACGTCACCACCTCGACACCGTCCCCGAAGACTCCGACGGGATCGTCGTACC
GGTCACCGAGCACGGTGTGGCCACTTTGCTACCCCGGTATCCGGAGACTTACGAAGTGGAGGACATCGTCGACGTGGCAA
AAGATCGAGGATTATCGGTGCAGGCGCTCATGGACTTCACGTGCGCCGGCTGTGAGCATCTATCTCCCGATGGCTATCCC
TCGCTTCGTTCGACCCTCGACTATTTGGCCTCGGACTTGGAGGTCGACGGTGTGGTGGTGGCGGATCCGTACCTGGTGGA
AGTGCTCGCTACGGAGTACGATCTCACAGTGGTAGTCTCGCATACCGCCGCCGTGGATACTCCGGAGAAGGCGTGGCACT
TCGAGCGACTCGGAGCTGACGTCATCACTGTGGATCCGGCGCTGAACTCGAACGAGGAAGAGGTTTCCGCCATCCGAGAG
CGGGTCAGTGTCGAACTCCGGACCGCCGTAGGCGCGATTACGTTCCGGGACCCGGTCGCCTTCTTCGAGCGTAACCTGTT
CTCGCACGCCACGGCCGAGGGAATCGAAGTGGACCCCTACCGTAACAATCCCTACGAGCCGATGAGGGAGAGGGTCGTTG
TGTGGGAGGTTCGTGAGGAGCTGTTCGACGAGGTCTTCATCCTCGCCTCCGGAGAACCTCCGTGA

Upstream 100 bases:

>100_bases
TCGATCTGGCCGTCCGAACACTGTGCGACACGTGTCGTCGCGAGTTCTCCGGGGAGGAGCCCAGGCCCGACCTGAAGGTG
CTCAGGGGCGCCACCGAGCG

Downstream 100 bases:

>100_bases
TATCGGTCCTGGTCACTATCCCCACGACCCTGTTTTCCCCGTCCACCACGGGTAGACATGAGATGTTATGTCTGTCCATG
CGCCTTAACGCCTCGTCGAC

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRGLSVQALMDFTCAGCEHLSPDGYP
SLRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVSHTAAVDTPEKAWHFERLGADVITVDPALNSNEEEVSAIRE
RVSVELRTAVGAITFRDPVAFFERNLFSHATAEGIEVDPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP

Sequences:

>Translated_234_residues
MTRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRGLSVQALMDFTCAGCEHLSPDGYP
SLRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVSHTAAVDTPEKAWHFERLGADVITVDPALNSNEEEVSAIRE
RVSVELRTAVGAITFRDPVAFFERNLFSHATAEGIEVDPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP
>Mature_233_residues
TRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRGLSVQALMDFTCAGCEHLSPDGYPS
LRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVSHTAAVDTPEKAWHFERLGADVITVDPALNSNEEEVSAIRER
VSVELRTAVGAITFRDPVAFFERNLFSHATAEGIEVDPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 26241; Mature: 26109

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRGLSV
CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCH
QALMDFTCAGCEHLSPDGYPSLRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCEEEEEE
HTAAVDTPEKAWHFERLGADVITVDPALNSNEEEVSAIRERVSVELRTAVGAITFRDPVA
CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHH
FFERNLFSHATAEGIEVDPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP
HHHHHHHHHHCCCCCEECCCCCCCCCHHHHHEEHHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
TRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRGLSV
CCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCH
QALMDFTCAGCEHLSPDGYPSLRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCEEEEEE
HTAAVDTPEKAWHFERLGADVITVDPALNSNEEEVSAIRERVSVELRTAVGAITFRDPVA
CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHH
FFERNLFSHATAEGIEVDPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP
HHHHHHHHHHCCCCCEECCCCCCCCCHHHHHEEHHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]