Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094341
Identifier: 20094341
GI number: 20094341
Start: 859827
End: 860189
Strand: Direct
Name: 20094341
Synonym: MK0905
Alternate gene names: NA
Gene position: 859827-860189 (Clockwise)
Preceding gene: 20094340
Following gene: 20094342
Centisome position: 50.73
GC content: 64.46
Gene sequence:
>363_bases TTGTCCAAGAAGCTACTGCGTAGGTGCGCCGCACAGCTCAAACGTGTGCAGGATGCGCTCGGGGACGACGCGGTAGTCTC CGAGGTTGACCTGTTCGTGGCACGGTGCGGTTGTGTAGGTGTCGTGTTCATGGTCCGGGGCGTCGAGCTACGAGATATCA GCGACGAGGTTCTTGACGGACTGGAGGAAGCCGGGAAGGCCCTGGGCGTGCGACCCGACGTGGTTTACGCGCGCGTCGTC CCCGGCACCCAAGTGGTGATCGATCTGGCCGTCCGAACACTGTGCGACACGTGTCGTCGCGAGTTCTCCGGGGAGGAGCC CAGGCCCGACCTGAAGGTGCTCAGGGGCGCCACCGAGCGTTGA
Upstream 100 bases:
>100_bases TTCAGGTGTCACGAGTGCGGCTTCTGCCGTGAACTGGCCGATCGCGTGGTTGAAGTTCGAGAGTTCAAGAGCACCGTCGT AGGGGAGGTGAGCGCCTAAA
Downstream 100 bases:
>100_bases CCCGAAGATGGTACCTGTGTTGTTCACGTCACCACCTCGACACCGTCCCCGAAGACTCCGACGGGATCGTCGTACCGGTC ACCGAGCACGGTGTGGCCAC
Product: metal-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSKKLLRRCAAQLKRVQDALGDDAVVSEVDLFVARCGCVGVVFMVRGVELRDISDEVLDGLEEAGKALGVRPDVVYARVV PGTQVVIDLAVRTLCDTCRREFSGEEPRPDLKVLRGATER
Sequences:
>Translated_120_residues MSKKLLRRCAAQLKRVQDALGDDAVVSEVDLFVARCGCVGVVFMVRGVELRDISDEVLDGLEEAGKALGVRPDVVYARVV PGTQVVIDLAVRTLCDTCRREFSGEEPRPDLKVLRGATER >Mature_119_residues SKKLLRRCAAQLKRVQDALGDDAVVSEVDLFVARCGCVGVVFMVRGVELRDISDEVLDGLEEAGKALGVRPDVVYARVVP GTQVVIDLAVRTLCDTCRREFSGEEPRPDLKVLRGATER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020380 - ProDom: PD076426 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13143; Mature: 13012
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLLRRCAAQLKRVQDALGDDAVVSEVDLFVARCGCVGVVFMVRGVELRDISDEVLDG CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LEEAGKALGVRPDVVYARVVPGTQVVIDLAVRTLCDTCRREFSGEEPRPDLKVLRGATER HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC >Mature Secondary Structure SKKLLRRCAAQLKRVQDALGDDAVVSEVDLFVARCGCVGVVFMVRGVELRDISDEVLDG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LEEAGKALGVRPDVVYARVVPGTQVVIDLAVRTLCDTCRREFSGEEPRPDLKVLRGATER HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]