Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094319
Identifier: 20094319
GI number: 20094319
Start: 833538
End: 834059
Strand: Direct
Name: 20094319
Synonym: MK0883
Alternate gene names: NA
Gene position: 833538-834059 (Clockwise)
Preceding gene: 20094318
Following gene: 20094320
Centisome position: 49.18
GC content: 59.39
Gene sequence:
>522_bases TTGAGCAGTGTATGGAGAGGGATTCTCAGGATCCTCCGATCGATGTTGGTGATTTCCATAATTCTCGCCGTCTGGAGCTC TTTCACGGGCTCGCTGCTGGCTAAATGGGAGGCCAAGCTCGAGCATAACCCCGGTCTAGCCGCGCTCCTCCCAGTTCTAA TGGCGGCGGCCGGCGCTGCGGCCGCGTCGTTCGGTAGCCGTCTTTCTACCTATTTGCACTTAGGGACGTTCACGATATGG GCGGTACTGAGAGACGCGTTGGTGCAAGGCTCGGCCTTGCTGTTGGTAATCGCGGGCTACGCCGGTCTCGTGACCGTCGC GTTCTCCGGTCGACCGTCTCTGATCCTGTTGGCCGTTGAGTCGACGGGGTTAACGTTCTTGACCTCTATTCTCGTGGCCC TCGGCTCGGCGTTCACGAGCGTAAGACTAGGGATGGATCCCGACGACGTCGTTGGGCCCGTCGTGACGACGGCCGCGGAT TCCGTAGGGATCATACTTACCTTAACCCTAGCTCCGGGGTAA
Upstream 100 bases:
>100_bases TGGGTTTCGATCCGGATCATGTCGCTCCGCCACTAACAACGGCTCTCTCGGACGTACTGACGGTGGCTTTCCTGTTCACG ATTGCGGAGGTGATGGTAGG
Downstream 100 bases:
>100_bases TGGCGTTGGAAATGGAAAAAATCGAAGAAGAGGTTAAGAAGCGGACGGTCGTGGAGCTCCTTACGGAAATGAAGAATCTC GCGCAGCTATCCGTTGACCT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSSVWRGILRILRSMLVISIILAVWSSFTGSLLAKWEAKLEHNPGLAALLPVLMAAAGAAAASFGSRLSTYLHLGTFTIW AVLRDALVQGSALLLVIAGYAGLVTVAFSGRPSLILLAVESTGLTFLTSILVALGSAFTSVRLGMDPDDVVGPVVTTAAD SVGIILTLTLAPG
Sequences:
>Translated_173_residues MSSVWRGILRILRSMLVISIILAVWSSFTGSLLAKWEAKLEHNPGLAALLPVLMAAAGAAAASFGSRLSTYLHLGTFTIW AVLRDALVQGSALLLVIAGYAGLVTVAFSGRPSLILLAVESTGLTFLTSILVALGSAFTSVRLGMDPDDVVGPVVTTAAD SVGIILTLTLAPG >Mature_172_residues SSVWRGILRILRSMLVISIILAVWSSFTGSLLAKWEAKLEHNPGLAALLPVLMAAAGAAAASFGSRLSTYLHLGTFTIWA VLRDALVQGSALLLVIAGYAGLVTVAFSGRPSLILLAVESTGLTFLTSILVALGSAFTSVRLGMDPDDVVGPVVTTAADS VGIILTLTLAPG
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17847; Mature: 17716
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVWRGILRILRSMLVISIILAVWSSFTGSLLAKWEAKLEHNPGLAALLPVLMAAAGAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AASFGSRLSTYLHLGTFTIWAVLRDALVQGSALLLVIAGYAGLVTVAFSGRPSLILLAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEC STGLTFLTSILVALGSAFTSVRLGMDPDDVVGPVVTTAADSVGIILTLTLAPG CCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCC >Mature Secondary Structure SSVWRGILRILRSMLVISIILAVWSSFTGSLLAKWEAKLEHNPGLAALLPVLMAAAGAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AASFGSRLSTYLHLGTFTIWAVLRDALVQGSALLLVIAGYAGLVTVAFSGRPSLILLAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEC STGLTFLTSILVALGSAFTSVRLGMDPDDVVGPVVTTAADSVGIILTLTLAPG CCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA