Definition | Methanopyrus kandleri AV19, complete genome. |
---|---|
Accession | NC_003551 |
Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094318
Identifier: 20094318
GI number: 20094318
Start: 833026
End: 833541
Strand: Direct
Name: 20094318
Synonym: MK0882
Alternate gene names: NA
Gene position: 833026-833541 (Clockwise)
Preceding gene: 20094317
Following gene: 20094319
Centisome position: 49.15
GC content: 59.3
Gene sequence:
>516_bases ATGAAGCGCTTCCTCAGAGACCTTTCCGCCGCCACAGCATCACTGACGGCCTTGGTCCTCATGGAATCGTTCACGGGGAT TACGCTCGAATCCCTTAAGCATCGGTGGGTGCATCATCCTGAGTTCTTGGCGATGCTTCCGGCTCTCATGGACTTTCGGG GCAACGTGGCTCTCGCTCACTCCGCCCGCACCGCCACGGCGACCCATCTGGGTGACGAGGAGAGGGCACTGCAGAGCTCA CTGGCGGTTCTCCTAATCGGCCTCATGGTGCCTCCGGTCATCGGCTCGGTCGTCTACTACGCCTACGGAGGTGATTTGAG TACCCTCGTAGGGACTGCGTTCCTTACCGTACTGTCGGTTACCGCGGTCGTGACGCCAGTAACAGTCGGTATCGTCCGCA TGGCGGCGATGTTGGGTTTCGATCCGGATCATGTCGCTCCGCCACTAACAACGGCTCTCTCGGACGTACTGACGGTGGCT TTCCTGTTCACGATTGCGGAGGTGATGGTAGGTTGA
Upstream 100 bases:
>100_bases AGGACCTCCTGAGCTGGGATTACTCCTACTCGCCTCCGGTCGCTCGGGTTATAGAACCCATATACGAGGCCGCCGAGCTC CTTAGGGAGGAGCTTCACTC
Downstream 100 bases:
>100_bases GCAGTGTATGGAGAGGGATTCTCAGGATCCTCCGATCGATGTTGGTGATTTCCATAATTCTCGCCGTCTGGAGCTCTTTC ACGGGCTCGCTGCTGGCTAA
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKRFLRDLSAATASLTALVLMESFTGITLESLKHRWVHHPEFLAMLPALMDFRGNVALAHSARTATATHLGDEERALQSS LAVLLIGLMVPPVIGSVVYYAYGGDLSTLVGTAFLTVLSVTAVVTPVTVGIVRMAAMLGFDPDHVAPPLTTALSDVLTVA FLFTIAEVMVG
Sequences:
>Translated_171_residues MKRFLRDLSAATASLTALVLMESFTGITLESLKHRWVHHPEFLAMLPALMDFRGNVALAHSARTATATHLGDEERALQSS LAVLLIGLMVPPVIGSVVYYAYGGDLSTLVGTAFLTVLSVTAVVTPVTVGIVRMAAMLGFDPDHVAPPLTTALSDVLTVA FLFTIAEVMVG >Mature_171_residues MKRFLRDLSAATASLTALVLMESFTGITLESLKHRWVHHPEFLAMLPALMDFRGNVALAHSARTATATHLGDEERALQSS LAVLLIGLMVPPVIGSVVYYAYGGDLSTLVGTAFLTVLSVTAVVTPVTVGIVRMAAMLGFDPDHVAPPLTTALSDVLTVA FLFTIAEVMVG
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18151; Mature: 18151
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLRDLSAATASLTALVLMESFTGITLESLKHRWVHHPEFLAMLPALMDFRGNVALAH CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC SARTATATHLGDEERALQSSLAVLLIGLMVPPVIGSVVYYAYGGDLSTLVGTAFLTVLSV CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TAVVTPVTVGIVRMAAMLGFDPDHVAPPLTTALSDVLTVAFLFTIAEVMVG HHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFLRDLSAATASLTALVLMESFTGITLESLKHRWVHHPEFLAMLPALMDFRGNVALAH CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC SARTATATHLGDEERALQSSLAVLLIGLMVPPVIGSVVYYAYGGDLSTLVGTAFLTVLSV CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TAVVTPVTVGIVRMAAMLGFDPDHVAPPLTTALSDVLTVAFLFTIAEVMVG HHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA