Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094320
Identifier: 20094320
GI number: 20094320
Start: 834071
End: 834661
Strand: Direct
Name: 20094320
Synonym: MK0884
Alternate gene names: NA
Gene position: 834071-834661 (Clockwise)
Preceding gene: 20094319
Following gene: 20094321
Centisome position: 49.21
GC content: 54.99
Gene sequence:
>591_bases ATGGAAAAAATCGAAGAAGAGGTTAAGAAGCGGACGGTCGTGGAGCTCCTTACGGAAATGAAGAATCTCGCGCAGCTATC CGTTGACCTGGCTTACTCGGTCTTACTGTTCGGGAGCCCCGAGTTGGCCGAGGAGGTGCGACGCATTGAGAGACGCGTGG ACGAGTTGTCTATGGTACTGAAGGCGAAGCTCGCTCTGGCTATTCGGGATCTCGAGGACGTTCGCCATCTACTGCCCATA ATGGAGTTGACGCAGTCGATGGAGGTTATCACCGACGCCGCGAACGACATTGCCGAAACCGTGGCTATGGGTGCGGAACC TCACCCTATCGTTCAGAAGGCCATCGCCGAGTCCGAAGAGAAGATACGGCTTGTTCGGGTTGAAGAGGGGTCGGAATTAG ACGGCAAAACGCTGGGAGAACTCAGGCTGGCCAGTGAGACTGGGATGCACGTAATCGCGATCAGGCGGGGGTCGACTTGG ATAATAGGGCCGGATAAAGACGCCAAGATACTGGGAGGAGATGTCTTGATAGTTCGTGGTCGGGACGAAGGATACAGGAA ACTGAAGAAGATGGCTAGTGGGCGAGGATGA
Upstream 100 bases:
>100_bases TGGATCCCGACGACGTCGTTGGGCCCGTCGTGACGACGGCCGCGGATTCCGTAGGGATCATACTTACCTTAACCCTAGCT CCGGGGTAATGGCGTTGGAA
Downstream 100 bases:
>100_bases CATGCGTTGGGAGACTAGGCGCGAAAAGATCGTGTCCTTGCTCACGGAGAGCCGTGAACCTCTGACCATTGAGGAGATAG CTTACATGGTCGGAGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: PhoU Family Protein; TrkA Domain-Containing Protein; Potassium Channel; Potassium Channel Protein; Phosphate Transport Regulator; TrkA-C Domain-Containing Protein; Potassium Channel Related Protein; Potassium Channel-Related Protein; Potassium Channel-Like Protein; TrkA-C
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG
Sequences:
>Translated_196_residues MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG >Mature_196_residues MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG
Specific function: Unknown
COG id: COG3273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21810; Mature: 21810
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KAKLALAIRDLEDVRHLLPIMELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH KIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTWIIGPDKDAKILGGDVLIVRG CEEEEEECCCCCCCCCHHHHEEECCCCCCEEEEEECCCEEEECCCCCCEEECCCEEEEEC RDEGYRKLKKMASGRG CCHHHHHHHHHHCCCC >Mature Secondary Structure MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KAKLALAIRDLEDVRHLLPIMELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH KIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTWIIGPDKDAKILGGDVLIVRG CEEEEEECCCCCCCCCHHHHEEECCCCCCEEEEEECCCEEEECCCCCCEEECCCEEEEEC RDEGYRKLKKMASGRG CCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA