Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094320

Identifier: 20094320

GI number: 20094320

Start: 834071

End: 834661

Strand: Direct

Name: 20094320

Synonym: MK0884

Alternate gene names: NA

Gene position: 834071-834661 (Clockwise)

Preceding gene: 20094319

Following gene: 20094321

Centisome position: 49.21

GC content: 54.99

Gene sequence:

>591_bases
ATGGAAAAAATCGAAGAAGAGGTTAAGAAGCGGACGGTCGTGGAGCTCCTTACGGAAATGAAGAATCTCGCGCAGCTATC
CGTTGACCTGGCTTACTCGGTCTTACTGTTCGGGAGCCCCGAGTTGGCCGAGGAGGTGCGACGCATTGAGAGACGCGTGG
ACGAGTTGTCTATGGTACTGAAGGCGAAGCTCGCTCTGGCTATTCGGGATCTCGAGGACGTTCGCCATCTACTGCCCATA
ATGGAGTTGACGCAGTCGATGGAGGTTATCACCGACGCCGCGAACGACATTGCCGAAACCGTGGCTATGGGTGCGGAACC
TCACCCTATCGTTCAGAAGGCCATCGCCGAGTCCGAAGAGAAGATACGGCTTGTTCGGGTTGAAGAGGGGTCGGAATTAG
ACGGCAAAACGCTGGGAGAACTCAGGCTGGCCAGTGAGACTGGGATGCACGTAATCGCGATCAGGCGGGGGTCGACTTGG
ATAATAGGGCCGGATAAAGACGCCAAGATACTGGGAGGAGATGTCTTGATAGTTCGTGGTCGGGACGAAGGATACAGGAA
ACTGAAGAAGATGGCTAGTGGGCGAGGATGA

Upstream 100 bases:

>100_bases
TGGATCCCGACGACGTCGTTGGGCCCGTCGTGACGACGGCCGCGGATTCCGTAGGGATCATACTTACCTTAACCCTAGCT
CCGGGGTAATGGCGTTGGAA

Downstream 100 bases:

>100_bases
CATGCGTTGGGAGACTAGGCGCGAAAAGATCGTGTCCTTGCTCACGGAGAGCCGTGAACCTCTGACCATTGAGGAGATAG
CTTACATGGTCGGAGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: PhoU Family Protein; TrkA Domain-Containing Protein; Potassium Channel; Potassium Channel Protein; Phosphate Transport Regulator; TrkA-C Domain-Containing Protein; Potassium Channel Related Protein; Potassium Channel-Related Protein; Potassium Channel-Like Protein; TrkA-C

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI
MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW
IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG

Sequences:

>Translated_196_residues
MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI
MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW
IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG
>Mature_196_residues
MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVLKAKLALAIRDLEDVRHLLPI
MELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEEKIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTW
IIGPDKDAKILGGDVLIVRGRDEGYRKLKKMASGRG

Specific function: Unknown

COG id: COG3273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21810; Mature: 21810

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KAKLALAIRDLEDVRHLLPIMELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH
KIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTWIIGPDKDAKILGGDVLIVRG
CEEEEEECCCCCCCCCHHHHEEECCCCCCEEEEEECCCEEEECCCCCCEEECCCEEEEEC
RDEGYRKLKKMASGRG
CCHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKIEEEVKKRTVVELLTEMKNLAQLSVDLAYSVLLFGSPELAEEVRRIERRVDELSMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KAKLALAIRDLEDVRHLLPIMELTQSMEVITDAANDIAETVAMGAEPHPIVQKAIAESEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHH
KIRLVRVEEGSELDGKTLGELRLASETGMHVIAIRRGSTWIIGPDKDAKILGGDVLIVRG
CEEEEEECCCCCCCCCHHHHEEECCCCCCEEEEEECCCEEEECCCCCCEEECCCEEEEEC
RDEGYRKLKKMASGRG
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA