Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094310
Identifier: 20094310
GI number: 20094310
Start: 825979
End: 826695
Strand: Direct
Name: 20094310
Synonym: MK0874
Alternate gene names: NA
Gene position: 825979-826695 (Clockwise)
Preceding gene: 20094309
Following gene: 20094311
Centisome position: 48.73
GC content: 61.09
Gene sequence:
>717_bases GTGCAGCCACTGACGAGGAGGAACAAGGACGAGCATCCCGCGGTTCTCGACCCGGATCGAACGATCGTCCTAGGTGACGT GACGGTGTCCCGAGACGCGGTGATAGGACCGGAGGTCAGACTGGGACCGGACGCCGTCGTACGAGGCGCTGTGATATCCG GACGTTGTGTCGTCTACAATTGTGAGCTCGGACGTTGTGCCGTAGGTCCTAAAACCACGGTCACGGGTGATGTTGGGGAC GGAGTTACCATCCACTCGGGTACGATTCTAGGGCAGCTCCGTGTGAGCGGGGAGATCGAACCACCCGAGGTAGGTGAGGG GGCCTTCTTGGGACCTGGGGTTTCCGTTCTTCCGGGGACGGTCATAGGTCCGGAGTCCGTCGTGATGCCCGATAGTGTGG TGACCGAGCGCGTACCGCGTCGCGGAGTCGTCAGCGGAAATCCGGCGATGCCCACGGGGATGGTCGTCGACGCGGAGACG TTGATCCTGGAGTTCGATGGAAAGCGGCTGTTACTCGAAGGGAAACGGGGAACCGCCTTCGACGTCAGGCTGAGCGACGG CGAACTCGAAATCACCGAAGAGAGCCCCGATAACTTCGGAGCCGTGCTTGAGAAGGACGTAGTGAAGGTGGTTCGCATGG GACACGCGATACCCTTGCCCGCTGAGCGACCTTTCTCCATCCCCCTGCACGTACTGGAGGTACGAACGAAGGGGTAA
Upstream 100 bases:
>100_bases TTCGTCGAAGGGTTCGGGGCGGCGAAATACGCCGTCGAGGACGTTCTGCGGTGCGTAAAAGTGGGCACCGACACGCTCGA AACCGTCAGGGGGAGCGAGA
Downstream 100 bases:
>100_bases GTGGGCGGTGCCGGTCCGCGAGTCACTACTGATAGACACCGATGTGCGCCGCTCGCTAGTGCTCGGGTCCGTATTGGAGA TGTGCGAGGTGGAAAGAGCA
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MQPLTRRNKDEHPAVLDPDRTIVLGDVTVSRDAVIGPEVRLGPDAVVRGAVISGRCVVYNCELGRCAVGPKTTVTGDVGD GVTIHSGTILGQLRVSGEIEPPEVGEGAFLGPGVSVLPGTVIGPESVVMPDSVVTERVPRRGVVSGNPAMPTGMVVDAET LILEFDGKRLLLEGKRGTAFDVRLSDGELEITEESPDNFGAVLEKDVVKVVRMGHAIPLPAERPFSIPLHVLEVRTKG
Sequences:
>Translated_238_residues MQPLTRRNKDEHPAVLDPDRTIVLGDVTVSRDAVIGPEVRLGPDAVVRGAVISGRCVVYNCELGRCAVGPKTTVTGDVGD GVTIHSGTILGQLRVSGEIEPPEVGEGAFLGPGVSVLPGTVIGPESVVMPDSVVTERVPRRGVVSGNPAMPTGMVVDAET LILEFDGKRLLLEGKRGTAFDVRLSDGELEITEESPDNFGAVLEKDVVKVVRMGHAIPLPAERPFSIPLHVLEVRTKG >Mature_238_residues MQPLTRRNKDEHPAVLDPDRTIVLGDVTVSRDAVIGPEVRLGPDAVVRGAVISGRCVVYNCELGRCAVGPKTTVTGDVGD GVTIHSGTILGQLRVSGEIEPPEVGEGAFLGPGVSVLPGTVIGPESVVMPDSVVTERVPRRGVVSGNPAMPTGMVVDAET LILEFDGKRLLLEGKRGTAFDVRLSDGELEITEESPDNFGAVLEKDVVKVVRMGHAIPLPAERPFSIPLHVLEVRTKG
Specific function: Unknown
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25132; Mature: 25132
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLTRRNKDEHPAVLDPDRTIVLGDVTVSRDAVIGPEVRLGPDAVVRGAVISGRCVVYN CCCCCCCCCCCCCCEECCCCEEEEEEEEECCCCEECCCEEECCHHHEECEEEECEEEEEE CELGRCAVGPKTTVTGDVGDGVTIHSGTILGQLRVSGEIEPPEVGEGAFLGPGVSVLPGT CCCCCEECCCCCEEECCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCEECCCHHHCCCC VIGPESVVMPDSVVTERVPRRGVVSGNPAMPTGMVVDAETLILEFDGKRLLLEGKRGTAF EECCCCEECCCHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEECCCEEEEECCCCCEE DVRLSDGELEITEESPDNFGAVLEKDVVKVVRMGHAIPLPAERPFSIPLHVLEVRTKG EEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MQPLTRRNKDEHPAVLDPDRTIVLGDVTVSRDAVIGPEVRLGPDAVVRGAVISGRCVVYN CCCCCCCCCCCCCCEECCCCEEEEEEEEECCCCEECCCEEECCHHHEECEEEECEEEEEE CELGRCAVGPKTTVTGDVGDGVTIHSGTILGQLRVSGEIEPPEVGEGAFLGPGVSVLPGT CCCCCEECCCCCEEECCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCEECCCHHHCCCC VIGPESVVMPDSVVTERVPRRGVVSGNPAMPTGMVVDAETLILEFDGKRLLLEGKRGTAF EECCCCEECCCHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEECCCEEEEECCCCCEE DVRLSDGELEITEESPDNFGAVLEKDVVKVVRMGHAIPLPAERPFSIPLHVLEVRTKG EEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA