Definition | Methanopyrus kandleri AV19, complete genome. |
---|---|
Accession | NC_003551 |
Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is CpsB_1
Identifier: 20094309
GI number: 20094309
Start: 825400
End: 825711
Strand: Direct
Name: CpsB_1
Synonym: MK0873
Alternate gene names: NA
Gene position: 825400-825711 (Clockwise)
Preceding gene: 20094305
Following gene: 20094310
Centisome position: 48.7
GC content: 60.58
Gene sequence:
>312_bases CTGACGGTAAGTGCTGAGGGGGAACGCGGACCGTGCGGACGCGTGCGAGAGTTGTACTCAAATGACAAGGTCTCCGTGGC AGAAGTGAGTGTTCGGGGTGAAGGCGAAGAGCATTACCACCGACGCACGTTCGAGGTGTACTACGTGATCGACGGTCGTG GAAAAGTGGTGCTGAACGGTCGTCCCGTCGACGTGGGACCGGGGGACGTCGTCGCCATCGAACCGGGGACAAGGCATAAG GTGATCGGCAACCTGAGGATGCTGGTGGTGTGCATCCCCCCGTTCGACCCGGAGGATGTGTACCGGGTATGA
Upstream 100 bases:
>100_bases ACGCCCAACGCCGCGGCCAAAACCGTCCACCGGGCGACGTGAATCAACGCCCCCGTCGACGGCAACTCTCCACCTCCGGG GGTTCTCGGCGGTGTGGACC
Downstream 100 bases:
>100_bases TGAGCTAAGCCTACGCCGACCTAGTGGGGAGTGAGGATACGGGTGAGCTGCCTGACCCACCCCGCGTGTTTATCGAACTG AGGTTAAGAGTTCCCGAAGA
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTVSAEGERGPCGRVRELYSNDKVSVAEVSVRGEGEEHYHRRTFEVYYVIDGRGKVVLNGRPVDVGPGDVVAIEPGTRHK VIGNLRMLVVCIPPFDPEDVYRV
Sequences:
>Translated_103_residues MTVSAEGERGPCGRVRELYSNDKVSVAEVSVRGEGEEHYHRRTFEVYYVIDGRGKVVLNGRPVDVGPGDVVAIEPGTRHK VIGNLRMLVVCIPPFDPEDVYRV >Mature_102_residues TVSAEGERGPCGRVRELYSNDKVSVAEVSVRGEGEEHYHRRTFEVYYVIDGRGKVVLNGRPVDVGPGDVVAIEPGTRHKV IGNLRMLVVCIPPFDPEDVYRV
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11453; Mature: 11322
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSAEGERGPCGRVRELYSNDKVSVAEVSVRGEGEEHYHRRTFEVYYVIDGRGKVVLNG CCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCHHCEEEEEEEEEEECCCCEEEECC RPVDVGPGDVVAIEPGTRHKVIGNLRMLVVCIPPFDPEDVYRV CCCCCCCCCEEEECCCCCEEEECCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure TVSAEGERGPCGRVRELYSNDKVSVAEVSVRGEGEEHYHRRTFEVYYVIDGRGKVVLNG CCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCHHCEEEEEEEEEEECCCCEEEECC RPVDVGPGDVVAIEPGTRHKVIGNLRMLVVCIPPFDPEDVYRV CCCCCCCCCEEEECCCCCEEEECCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA