Definition | Methanopyrus kandleri AV19, complete genome. |
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Accession | NC_003551 |
Length | 1,694,969 |
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The map label for this gene is 20094311
Identifier: 20094311
GI number: 20094311
Start: 826703
End: 827305
Strand: Direct
Name: 20094311
Synonym: MK0875
Alternate gene names: NA
Gene position: 826703-827305 (Clockwise)
Preceding gene: 20094310
Following gene: 20094312
Centisome position: 48.77
GC content: 59.2
Gene sequence:
>603_bases GTGCCGGTCCGCGAGTCACTACTGATAGACACCGATGTGCGCCGCTCGCTAGTGCTCGGGTCCGTATTGGAGATGTGCGA GGTGGAAAGAGCAGCCGTGTTGGGTACTGTTGCCCAGGGTAAGCGGTTCGAACACGGTGTTTTCGTGGCCGGGAAGCGGG TACCAGGCGAGGTAATCACGGTAGAGGTGGAAGTCTCAAGGGAAGTCGTACGCTCGGGATCGATGGAAATCGACCTCGAT CCCGCGGATCCGGATCTGGTGGCGGTGGTTGCGGATGTGAGGGCTACTGGACTCATCGCGAACCTCACCGGCTTACGACC GGAGCGCCGAGGATTCCACGCCCTGTTCGCTTTCTCGGGTGAGTTACCCGCTCGAGTACGGAAGAGGGTGGTAAGCAACC TGGACGTGTTCAGAGAATGTTGTCCGTGTGCCCTATTGGAGATCGGTGACGTGAAGCTGAGGTTTCTAGGAGGTCGACAG GTGTTCGATGAAAGGTCCAGACTGTCGTATACGGACGTCCTCGCCGTCAGGGACGGGAAGCCGATAGCATCTGCATGGAG GCCGGCGTCCAGAAGCGTCATCTCTAAGTTGGGGGCCAGGTGA
Upstream 100 bases:
>100_bases AAGGTGGTTCGCATGGGACACGCGATACCCTTGCCCGCTGAGCGACCTTTCTCCATCCCCCTGCACGTACTGGAGGTACG AACGAAGGGGTAAGTGGGCG
Downstream 100 bases:
>100_bases GGGACCGTGGTGGGGACAGTCAGAGAGCTTCCGACGCTGTTTTGCGAGTCGGTCGCACTGGAGGTACTCTCCGGGCCGAA ACCAGGGTTGGTGGATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPVRESLLIDTDVRRSLVLGSVLEMCEVERAAVLGTVAQGKRFEHGVFVAGKRVPGEVITVEVEVSREVVRSGSMEIDLD PADPDLVAVVADVRATGLIANLTGLRPERRGFHALFAFSGELPARVRKRVVSNLDVFRECCPCALLEIGDVKLRFLGGRQ VFDERSRLSYTDVLAVRDGKPIASAWRPASRSVISKLGAR
Sequences:
>Translated_200_residues MPVRESLLIDTDVRRSLVLGSVLEMCEVERAAVLGTVAQGKRFEHGVFVAGKRVPGEVITVEVEVSREVVRSGSMEIDLD PADPDLVAVVADVRATGLIANLTGLRPERRGFHALFAFSGELPARVRKRVVSNLDVFRECCPCALLEIGDVKLRFLGGRQ VFDERSRLSYTDVLAVRDGKPIASAWRPASRSVISKLGAR >Mature_199_residues PVRESLLIDTDVRRSLVLGSVLEMCEVERAAVLGTVAQGKRFEHGVFVAGKRVPGEVITVEVEVSREVVRSGSMEIDLDP ADPDLVAVVADVRATGLIANLTGLRPERRGFHALFAFSGELPARVRKRVVSNLDVFRECCPCALLEIGDVKLRFLGGRQV FDERSRLSYTDVLAVRDGKPIASAWRPASRSVISKLGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21881; Mature: 21749
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRESLLIDTDVRRSLVLGSVLEMCEVERAAVLGTVAQGKRFEHGVFVAGKRVPGEVIT CCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEE VEVEVSREVVRSGSMEIDLDPADPDLVAVVADVRATGLIANLTGLRPERRGFHALFAFSG EEEEEHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHEEHHCCCCCCCCCEEEEEEECC ELPARVRKRVVSNLDVFRECCPCALLEIGDVKLRFLGGRQVFDERSRLSYTDVLAVRDGK CCHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEEEECCCHHHHHHHCCCHHHEEEEECCC PIASAWRPASRSVISKLGAR CHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure PVRESLLIDTDVRRSLVLGSVLEMCEVERAAVLGTVAQGKRFEHGVFVAGKRVPGEVIT CCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEE VEVEVSREVVRSGSMEIDLDPADPDLVAVVADVRATGLIANLTGLRPERRGFHALFAFSG EEEEEHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHEEHHCCCCCCCCCEEEEEEECC ELPARVRKRVVSNLDVFRECCPCALLEIGDVKLRFLGGRQVFDERSRLSYTDVLAVRDGK CCHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEEEECCCHHHHHHHCCCHHHEEEEECCC PIASAWRPASRSVISKLGAR CHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA