| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is CdhC
Identifier: 20094157
GI number: 20094157
Start: 687632
End: 689035
Strand: Direct
Name: CdhC
Synonym: MK0720
Alternate gene names: 20094157
Gene position: 687632-689035 (Clockwise)
Preceding gene: 20094156
Following gene: 20094158
Centisome position: 40.57
GC content: 59.97
Gene sequence:
>1404_bases TTGACGAGTCTTGCGGATCTACCCGTGGACGTGAGCCCGAGGCACGAGGGCGAGCGGATACGAAGCGGCGACATGTACGT CGAGCTAGCGGGCCCAAAGAGCTTCGGTGCCGAACTGTTCAAGGTGGTGGATCCGGACGAGATCGAGCCGGACAAAGTGG AAGTCATCGGCCCGGATATCGATGAGATGGAGGAGGGAGGGAGATACCCGTTCGCCATCTACGTGAAGGCGGCGGGCGAG GAACTCGAGGAGGACGTGGAAGGTGTGCTAGAGCGACGTATCCACGAGTTCTGCAACTACGTCGAGGGTTTCATGCACCT GAACCAGCGAGATCAGATCTGGTGTAGGGTCTCCAAGAACGTCACGGAGAAGGGCTTCCGGCTGGAACACCTCGGCATCG CGCTCCGAGAGCTGTACAAGGAGGAGTTCGGCAACGTCATCGACTCCGTGGAAGTCACGATAATGACGGACGAGGAGAAA GTGGAGGAGTTTTTGGAGTACGCCAGGAGAGTCTACAAAAAGCGTGATGAGCGTGCGAAGGGACTCTCGGAGGAGGACGT CAACGAGTTCTACGTGTGCCTGATGTGCCAGTCCTTCGCGCCCACTCACGTGTGCGTAATCACACCGGACCGGCCGAGCC TCTGTGGATCGATCACCTGGCACGACGCCAAGGCGGCCTACAAGATCGATCCAGAAGGCCCCATATTCCCGATCGAGAAG GGAGAGTGCCTCGATCCCGAGGCCGGCGAGTACGAGGGTGTGAACGAGGCGGTCAAAGAACACTCACAGGGCACTGTGGA GCGGGTTTACCTGCACTCCTGTCTCGAGTACCCGCATACGAGCTGCGGCTGCTTCCAGGCCGTCGTGTTCTACATCCCCG AGGTAGACGGATTCGGAATCGTCGACCGCGAGTACCCGGGTGAGACCCCGATCGGGCTCCCGTTCTCGACCATGGCGGGT GAAGCCAGTGGCGGTGAGCAGCAGCCGGGCTTCGTCGGCGTAAGCTACGGTTACATGGAGTCCGATAAGTTCCTACAGTA CGACGGCGGCTGGGAGCGCGTGGTTTGGATGCCTAAGGCGCTGAAAGAACGCATGAAGCACGCCATCCCCGACGAGCTGT ACGACAAGATAGCCACCGAGGAGGATGCGACCACCGTGGAAGAGCTCCGGGAGTTCCTCGAGAAAGTCGAGCACCCGGTC GTCGAGCGCTGGGCCGAAGAGGAGGAAGAAGAGGAGGAGAAGGCTCCGGAAGAGGAAGCGCCGGCCGAAGAGCCGACGAT GGAGGTGAAGGAGCTCCCGATCGCGCCCGGTGGTGGTCTGAACGTGAAAATCGTGCTGAAAAACGCGAAGATCTACGCTG AGAAGGTCATCATCAAGCGCGCCGACCGGGAAGATAAGAGTTGA
Upstream 100 bases:
>100_bases CGCTCAGGTCCGAGATACGGGAGCTGCTGGAGGAGACCGGGTGGACACCTAGATCGCGCGCATCCGATCCTACCCTACTA CCCGAGGGGTGAATGTAACA
Downstream 100 bases:
>100_bases TCATAGCCTTCACTGGGAAGGGAGGCACGGGGAAGACTCTCCTCGCCGCACTCACAGTACTCGAGCTCCTCGACCGACAC CCCGACGCCGACCTGCTGGT
Product: acetyl-CoA decarbonylase/synthase complex subunit beta
Products: CO2; AH2
Alternate protein names: ACDS complex subunit beta; ACDS complex acyltransferase
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTSLADLPVDVSPRHEGERIRSGDMYVELAGPKSFGAELFKVVDPDEIEPDKVEVIGPDIDEMEEGGRYPFAIYVKAAGE ELEEDVEGVLERRIHEFCNYVEGFMHLNQRDQIWCRVSKNVTEKGFRLEHLGIALRELYKEEFGNVIDSVEVTIMTDEEK VEEFLEYARRVYKKRDERAKGLSEEDVNEFYVCLMCQSFAPTHVCVITPDRPSLCGSITWHDAKAAYKIDPEGPIFPIEK GECLDPEAGEYEGVNEAVKEHSQGTVERVYLHSCLEYPHTSCGCFQAVVFYIPEVDGFGIVDREYPGETPIGLPFSTMAG EASGGEQQPGFVGVSYGYMESDKFLQYDGGWERVVWMPKALKERMKHAIPDELYDKIATEEDATTVEELREFLEKVEHPV VERWAEEEEEEEEKAPEEEAPAEEPTMEVKELPIAPGGGLNVKIVLKNAKIYAEKVIIKRADREDKS
Sequences:
>Translated_467_residues MTSLADLPVDVSPRHEGERIRSGDMYVELAGPKSFGAELFKVVDPDEIEPDKVEVIGPDIDEMEEGGRYPFAIYVKAAGE ELEEDVEGVLERRIHEFCNYVEGFMHLNQRDQIWCRVSKNVTEKGFRLEHLGIALRELYKEEFGNVIDSVEVTIMTDEEK VEEFLEYARRVYKKRDERAKGLSEEDVNEFYVCLMCQSFAPTHVCVITPDRPSLCGSITWHDAKAAYKIDPEGPIFPIEK GECLDPEAGEYEGVNEAVKEHSQGTVERVYLHSCLEYPHTSCGCFQAVVFYIPEVDGFGIVDREYPGETPIGLPFSTMAG EASGGEQQPGFVGVSYGYMESDKFLQYDGGWERVVWMPKALKERMKHAIPDELYDKIATEEDATTVEELREFLEKVEHPV VERWAEEEEEEEEKAPEEEAPAEEPTMEVKELPIAPGGGLNVKIVLKNAKIYAEKVIIKRADREDKS >Mature_466_residues TSLADLPVDVSPRHEGERIRSGDMYVELAGPKSFGAELFKVVDPDEIEPDKVEVIGPDIDEMEEGGRYPFAIYVKAAGEE LEEDVEGVLERRIHEFCNYVEGFMHLNQRDQIWCRVSKNVTEKGFRLEHLGIALRELYKEEFGNVIDSVEVTIMTDEEKV EEFLEYARRVYKKRDERAKGLSEEDVNEFYVCLMCQSFAPTHVCVITPDRPSLCGSITWHDAKAAYKIDPEGPIFPIEKG ECLDPEAGEYEGVNEAVKEHSQGTVERVYLHSCLEYPHTSCGCFQAVVFYIPEVDGFGIVDREYPGETPIGLPFSTMAGE ASGGEQQPGFVGVSYGYMESDKFLQYDGGWERVVWMPKALKERMKHAIPDELYDKIATEEDATTVEELREFLEKVEHPVV ERWAEEEEEEEEKAPEEEAPAEEPTMEVKELPIAPGGGLNVKIVLKNAKIYAEKVIIKRADREDKS
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2)
COG id: COG1614
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CdhC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACDB_METKA (Q8TXF4)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614004.1 - ProteinModelPortal: Q8TXF4 - SMR: Q8TXF4 - GeneID: 1476821 - GenomeReviews: AE009439_GR - KEGG: mka:MK0720 - NMPDR: fig|190192.1.peg.717 - HOGENOM: HBG456963 - OMA: DRPALCG - ProtClustDB: PRK04456 - BioCyc: MKAN190192:MK0720-MONOMER - HAMAP: MF_01138 - InterPro: IPR004461 - InterPro: IPR011254 - TIGRFAMs: TIGR00316
Pfam domain/function: PF03598 CdhC; SSF56821 Prismane_like
EC number: 1.2.99.2
Molecular weight: Translated: 53016; Mature: 52885
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLADLPVDVSPRHEGERIRSGDMYVELAGPKSFGAELFKVVDPDEIEPDKVEVIGPDI CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCH DEMEEGGRYPFAIYVKAAGEELEEDVEGVLERRIHEFCNYVEGFMHLNQRDQIWCRVSKN HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC VTEKGFRLEHLGIALRELYKEEFGNVIDSVEVTIMTDEEKVEEFLEYARRVYKKRDERAK HHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHC GLSEEDVNEFYVCLMCQSFAPTHVCVITPDRPSLCGSITWHDAKAAYKIDPEGPIFPIEK CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCEECCCC GECLDPEAGEYEGVNEAVKEHSQGTVERVYLHSCLEYPHTSCGCFQAVVFYIPEVDGFGI CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC VDREYPGETPIGLPFSTMAGEASGGEQQPGFVGVSYGYMESDKFLQYDGGWERVVWMPKA CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECHHH LKERMKHAIPDELYDKIATEEDATTVEELREFLEKVEHPVVERWAEEEEEEEEKAPEEEA HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAEEPTMEVKELPIAPGGGLNVKIVLKNAKIYAEKVIIKRADREDKS CCCCCCCHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSLADLPVDVSPRHEGERIRSGDMYVELAGPKSFGAELFKVVDPDEIEPDKVEVIGPDI CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCH DEMEEGGRYPFAIYVKAAGEELEEDVEGVLERRIHEFCNYVEGFMHLNQRDQIWCRVSKN HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC VTEKGFRLEHLGIALRELYKEEFGNVIDSVEVTIMTDEEKVEEFLEYARRVYKKRDERAK HHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHC GLSEEDVNEFYVCLMCQSFAPTHVCVITPDRPSLCGSITWHDAKAAYKIDPEGPIFPIEK CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCEECCCC GECLDPEAGEYEGVNEAVKEHSQGTVERVYLHSCLEYPHTSCGCFQAVVFYIPEVDGFGI CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC VDREYPGETPIGLPFSTMAGEASGGEQQPGFVGVSYGYMESDKFLQYDGGWERVVWMPKA CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECHHH LKERMKHAIPDELYDKIATEEDATTVEELREFLEKVEHPVVERWAEEEEEEEEKAPEEEA HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAEEPTMEVKELPIAPGGGLNVKIVLKNAKIYAEKVIIKRADREDKS CCCCCCCHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CO; H2O; A
Specific reaction: CO + H2O + A = CO2 + AH2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014