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The map label for this gene is CooC_1

Identifier: 20094158

GI number: 20094158

Start: 689032

End: 689805

Strand: Direct

Name: CooC_1

Synonym: MK0721

Alternate gene names: NA

Gene position: 689032-689805 (Clockwise)

Preceding gene: 20094157

Following gene: 20094159

Centisome position: 40.65

GC content: 60.85

Gene sequence:

>774_bases
TTGATCATAGCCTTCACTGGGAAGGGAGGCACGGGGAAGACTCTCCTCGCCGCACTCACAGTACTCGAGCTCCTCGACCG
ACACCCCGACGCCGACCTGCTGGTGGTCGACGCCGACCCGGATGCTAACATGCCCGACGTGCTAGGGGTAGAGGTCGACA
CCACGCTCGGTGAGGTCAGGGAGCACTTCAAGCGCGAGATCGAGGGAGGAGAGCTCCCACCCGGCTTCGATAAACAGGCC
TACATGGAATACTTGGTGATGACCGCGCTTCAGGAGTCCGACGACTACGATTTGCTAGTGATGGGTAGATCTGAGGGTAA
GGGCTGCTACTGCGCCGTGAATCACTGGCTCCGTCGGGTTATGCGGGAGCTCCTCCCCAACTACGATTACGTGGTGATGG
ACTGCGAGGCAGGGCTCGAACACATCAGTCGTGGTATCATCGAGGGTGTCGACACGGTATTGACCGTCGTGGATCACTCC
TACAAGGCGCTCCGGACCGCGGTCAGGATATCCCGGCTGATCGACGAACTCGAATCCGACGTCGGTGAGATGTGGGTCGT
GGCGAACCGCGTGACCGAGGGGGAATACGCGGTCATACGCGAGAAGGGTGAGGAGCTTGGTCTTAGGTTCGCGGGATTCG
TGAGACCCGACGACGAGGTAGTTCGACTCGAGCTTCATGGTCGCCCTCTGACCGAACTCCCACCGGACGCCAAGGTCCGC
CGTGATATGCGCGCCGTGCTTACGCGGGTGGGGGTGCTCCTATCCGATGGCTGA

Upstream 100 bases:

>100_bases
TCGCGCCCGGTGGTGGTCTGAACGTGAAAATCGTGCTGAAAAACGCGAAGATCTACGCTGAGAAGGTCATCATCAAGCGC
GCCGACCGGGAAGATAAGAG

Downstream 100 bases:

>100_bases
GGATAAGGGCGTGAAGAACATGCTTGAGCACCTCGTGAAGAACCTATTAGTGGAAGATGTTGAGGAGATCGAGCTGCGGA
ACGTGACGATCGAGTTAGAC

Product: CO dehydrogenase maturation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MIIAFTGKGGTGKTLLAALTVLELLDRHPDADLLVVDADPDANMPDVLGVEVDTTLGEVREHFKREIEGGELPPGFDKQA
YMEYLVMTALQESDDYDLLVMGRSEGKGCYCAVNHWLRRVMRELLPNYDYVVMDCEAGLEHISRGIIEGVDTVLTVVDHS
YKALRTAVRISRLIDELESDVGEMWVVANRVTEGEYAVIREKGEELGLRFAGFVRPDDEVVRLELHGRPLTELPPDAKVR
RDMRAVLTRVGVLLSDG

Sequences:

>Translated_257_residues
MIIAFTGKGGTGKTLLAALTVLELLDRHPDADLLVVDADPDANMPDVLGVEVDTTLGEVREHFKREIEGGELPPGFDKQA
YMEYLVMTALQESDDYDLLVMGRSEGKGCYCAVNHWLRRVMRELLPNYDYVVMDCEAGLEHISRGIIEGVDTVLTVVDHS
YKALRTAVRISRLIDELESDVGEMWVVANRVTEGEYAVIREKGEELGLRFAGFVRPDDEVVRLELHGRPLTELPPDAKVR
RDMRAVLTRVGVLLSDG
>Mature_257_residues
MIIAFTGKGGTGKTLLAALTVLELLDRHPDADLLVVDADPDANMPDVLGVEVDTTLGEVREHFKREIEGGELPPGFDKQA
YMEYLVMTALQESDDYDLLVMGRSEGKGCYCAVNHWLRRVMRELLPNYDYVVMDCEAGLEHISRGIIEGVDTVLTVVDHS
YKALRTAVRISRLIDELESDVGEMWVVANRVTEGEYAVIREKGEELGLRFAGFVRPDDEVVRLELHGRPLTELPPDAKVR
RDMRAVLTRVGVLLSDG

Specific function: Unknown

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0084 and MJ0823 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28667; Mature: 28667

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIAFTGKGGTGKTLLAALTVLELLDRHPDADLLVVDADPDANMPDVLGVEVDTTLGEVR
CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECEEEHHHHHHHH
EHFKREIEGGELPPGFDKQAYMEYLVMTALQESDDYDLLVMGRSEGKGCYCAVNHWLRRV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHH
MRELLPNYDYVVMDCEAGLEHISRGIIEGVDTVLTVVDHSYKALRTAVRISRLIDELESD
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEMWVVANRVTEGEYAVIREKGEELGLRFAGFVRPDDEVVRLELHGRPLTELPPDAKVR
HHHEEHHHHHCCCCCCHHHHHCCHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHH
RDMRAVLTRVGVLLSDG
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIAFTGKGGTGKTLLAALTVLELLDRHPDADLLVVDADPDANMPDVLGVEVDTTLGEVR
CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECEEEHHHHHHHH
EHFKREIEGGELPPGFDKQAYMEYLVMTALQESDDYDLLVMGRSEGKGCYCAVNHWLRRV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHH
MRELLPNYDYVVMDCEAGLEHISRGIIEGVDTVLTVVDHSYKALRTAVRISRLIDELESD
HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEMWVVANRVTEGEYAVIREKGEELGLRFAGFVRPDDEVVRLELHGRPLTELPPDAKVR
HHHEEHHHHHCCCCCCHHHHHCCHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHH
RDMRAVLTRVGVLLSDG
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]