| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is AroC
Identifier: 20094069
GI number: 20094069
Start: 592609
End: 593769
Strand: Direct
Name: AroC
Synonym: MK0631
Alternate gene names: 20094069
Gene position: 592609-593769 (Clockwise)
Preceding gene: 20094066
Following gene: 20094071
Centisome position: 34.96
GC content: 67.01
Gene sequence:
>1161_bases GTGAACACGCTCGGCCGCCTGTTCCGCGTCACGACCTGGGGCGAGTCCCACGGTCCGGCACTGGGCGCGGTCGTGGACGG GTGTCCCGCGGGACTACCGCTTTCCGAGGACGATGTGCAGCGTGAGCTGGATCGGAGGCGCCCCGGACAGTCGGGGGTCT CGACACCGCGCTCGGAGCGGGACCGAGTGGAGATACTGTCGGGCGTCCACGAGGGACGCACTCTCGGGACTCCGATCAGT ATGATCGTGTGGAACGAGGACGTGGATTCTTCGAAGTACGAGCCGATCCGAACCCGGCCGCGTCCGGGTCACGCCGACGT CACGTACCGGTGGAAGTACGGGCACGTGGATTACCGGGGCGGTGGGAGGGCCTCGGGTCGCACGACCGTCGGTATCGTGA TGGGTGGCGCGGTGGCCAAGAAGTTGCTCCGTGAGGCGCCCTCGAACGACCCGCTGGGTATCGAGATCGTGGGTCACGTG GTGAGGGTGGGCTCCGTCGAGGCGGATCCCGGCGACCTGTCCGCGGAGGAGATCATGCAGTACGCCGAGTCGAACCCGGT TAGATGCGCGGATCCTGACGCCGCCGAGGAGATGCTCGGGGAGATCGAGCGTGCGCGCGAGAACGGGGACTCCGTCGGCG GGACGATCGAGGTGATCGCGGAGAACGTGCCACCCGGCCTGGGTGACCCGGTCTTCGGGCGGCTGGACGGGGAGCTAGCG GGGGCGTTGATGAACATCCCCGCGGTGAAGGCGGTGGAGGTGGGGTCCGGTGTTCGATGCTCCGAGATGCACGGATCCGA GCACAACGACCCGATCTGGTGGGACGGACATCCCGTCGTGGACGGCGACAACTCGGGGGGAGTACTCGGGGGTATTTCCC ACGGCGGTAGACTGGTCGTCCGGGTGCACGTGAAACCTACTCCGTCCGTGTCCGTTCCCCAGCGCACCGTCGACCTAGAG TCCGAAGAGGAAGTGGAGATCGAGGTGGAGGGACGACACGACCCCTGCATATGCCCGAGGGCTGTACCCGTGGCGGAATC CGTTGTGGCGATCGTGCTGGCCGACGCCGTTCTCAGGGCCGGGTACGTGAACCCGGACAGTGTCGAGCTCCCGGCCGCGT CCGTGGAGGATCGATGGAGGACGCTGAAACGACACCTATAG
Upstream 100 bases:
>100_bases CACCTCGGTTCTCCGGAAATCGTGTTCCGGAATCCTTTACCTGGGTTTCGCCCGCCCCGATTTTTAAGTGACCGACGCGG CGCCGTCGTGGGGGAGTCCC
Downstream 100 bases:
>100_bases CCCCCTGAGCTCGAACCGGAACTCGCACCGGCCGACGAGCTCACCGGTCACGGCCGCACACTCGGTTTCCTCCACGCGTT CGACCTCCTTGCCGAAGGTA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNTLGRLFRVTTWGESHGPALGAVVDGCPAGLPLSEDDVQRELDRRRPGQSGVSTPRSERDRVEILSGVHEGRTLGTPIS MIVWNEDVDSSKYEPIRTRPRPGHADVTYRWKYGHVDYRGGGRASGRTTVGIVMGGAVAKKLLREAPSNDPLGIEIVGHV VRVGSVEADPGDLSAEEIMQYAESNPVRCADPDAAEEMLGEIERARENGDSVGGTIEVIAENVPPGLGDPVFGRLDGELA GALMNIPAVKAVEVGSGVRCSEMHGSEHNDPIWWDGHPVVDGDNSGGVLGGISHGGRLVVRVHVKPTPSVSVPQRTVDLE SEEEVEIEVEGRHDPCICPRAVPVAESVVAIVLADAVLRAGYVNPDSVELPAASVEDRWRTLKRHL
Sequences:
>Translated_386_residues MNTLGRLFRVTTWGESHGPALGAVVDGCPAGLPLSEDDVQRELDRRRPGQSGVSTPRSERDRVEILSGVHEGRTLGTPIS MIVWNEDVDSSKYEPIRTRPRPGHADVTYRWKYGHVDYRGGGRASGRTTVGIVMGGAVAKKLLREAPSNDPLGIEIVGHV VRVGSVEADPGDLSAEEIMQYAESNPVRCADPDAAEEMLGEIERARENGDSVGGTIEVIAENVPPGLGDPVFGRLDGELA GALMNIPAVKAVEVGSGVRCSEMHGSEHNDPIWWDGHPVVDGDNSGGVLGGISHGGRLVVRVHVKPTPSVSVPQRTVDLE SEEEVEIEVEGRHDPCICPRAVPVAESVVAIVLADAVLRAGYVNPDSVELPAASVEDRWRTLKRHL >Mature_386_residues MNTLGRLFRVTTWGESHGPALGAVVDGCPAGLPLSEDDVQRELDRRRPGQSGVSTPRSERDRVEILSGVHEGRTLGTPIS MIVWNEDVDSSKYEPIRTRPRPGHADVTYRWKYGHVDYRGGGRASGRTTVGIVMGGAVAKKLLREAPSNDPLGIEIVGHV VRVGSVEADPGDLSAEEIMQYAESNPVRCADPDAAEEMLGEIERARENGDSVGGTIEVIAENVPPGLGDPVFGRLDGELA GALMNIPAVKAVEVGSGVRCSEMHGSEHNDPIWWDGHPVVDGDNSGGVLGGISHGGRLVVRVHVKPTPSVSVPQRTVDLE SEEEVEIEVEGRHDPCICPRAVPVAESVVAIVLADAVLRAGYVNPDSVELPAASVEDRWRTLKRHL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=366, Percent_Identity=49.4535519125683, Blast_Score=306, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6321290, Length=369, Percent_Identity=43.9024390243902, Blast_Score=313, Evalue=3e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_METKA (Q8TXN1)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613916.1 - ProteinModelPortal: Q8TXN1 - GeneID: 1476732 - GenomeReviews: AE009439_GR - KEGG: mka:MK0631 - NMPDR: fig|190192.1.peg.629 - HOGENOM: HBG292336 - OMA: TATIGKE - ProtClustDB: PRK05382 - BioCyc: MKAN190192:MK0631-MONOMER - BRENDA: 4.2.3.5 - HAMAP: MF_00300_A - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 41329; Mature: 41329
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLGRLFRVTTWGESHGPALGAVVDGCPAGLPLSEDDVQRELDRRRPGQSGVSTPRSER CCCHHCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH DRVEILSGVHEGRTLGTPISMIVWNEDVDSSKYEPIRTRPRPGHADVTYRWKYGHVDYRG HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECC GGRASGRTTVGIVMGGAVAKKLLREAPSNDPLGIEIVGHVVRVGSVEADPGDLSAEEIMQ CCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCCCCCCCCHHHHHH YAESNPVRCADPDAAEEMLGEIERARENGDSVGGTIEVIAENVPPGLGDPVFGRLDGELA HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH GALMNIPAVKAVEVGSGVRCSEMHGSEHNDPIWWDGHPVVDGDNSGGVLGGISHGGRLVV HHHHCCCCEEEEECCCCCEEHHCCCCCCCCCEEECCEEEECCCCCCCEEEEECCCCEEEE RVHVKPTPSVSVPQRTVDLESEEEVEIEVEGRHDPCICPRAVPVAESVVAIVLADAVLRA EEEECCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GYVNPDSVELPAASVEDRWRTLKRHL CCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNTLGRLFRVTTWGESHGPALGAVVDGCPAGLPLSEDDVQRELDRRRPGQSGVSTPRSER CCCHHCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH DRVEILSGVHEGRTLGTPISMIVWNEDVDSSKYEPIRTRPRPGHADVTYRWKYGHVDYRG HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECC GGRASGRTTVGIVMGGAVAKKLLREAPSNDPLGIEIVGHVVRVGSVEADPGDLSAEEIMQ CCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCCCCCCCCHHHHHH YAESNPVRCADPDAAEEMLGEIERARENGDSVGGTIEVIAENVPPGLGDPVFGRLDGELA HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH GALMNIPAVKAVEVGSGVRCSEMHGSEHNDPIWWDGHPVVDGDNSGGVLGGISHGGRLVV HHHHCCCCEEEEECCCCCEEHHCCCCCCCCCEEECCEEEECCCCCCCEEEEECCCCEEEE RVHVKPTPSVSVPQRTVDLESEEEVEIEVEGRHDPCICPRAVPVAESVVAIVLADAVLRA EEEECCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GYVNPDSVELPAASVEDRWRTLKRHL CCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014