| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094071
Identifier: 20094071
GI number: 20094071
Start: 594757
End: 595908
Strand: Direct
Name: 20094071
Synonym: MK0633
Alternate gene names: NA
Gene position: 594757-595908 (Clockwise)
Preceding gene: 20094069
Following gene: 20094073
Centisome position: 35.09
GC content: 64.84
Gene sequence:
>1152_bases TTGGAGAAGCTCGTCCTGCTACCGGGTCCGGTGATGGTGCACGAGGACGTCCTCCTCAGATCGGCGAAACAGGTCATGAA CCACCGTAGCGAGGAGTTCGAGGAGATACTCACGGAGTGCGTGGAGCTGTCCAAGTACCTGTTTCAGACGGACGGCAACG TCGCCATCATCACCGGTTCGGGCACCGCGGCCATGGAGGCGGCGATCTACAGCCTCCTCGAGCCCGGTGAGGAGGTCGTC GCGGTGGTCAACGGGAAGTTCGGCGAGCGGTTCGCGGACATCGCCGAGCGTCGGGGCGCCGAGGTGCGCCGGGTGGAGTT CGAGTGGGGCAAGGTCGCGGACCCCGAGCGCGTGGAGGAAGCCCTCGCGGACTCGGACGCGGAGGTCGTCACGCTCGTCC ACAACGAGACTTCGACGACCGTGCTCAACCCGGCCGAGGAGATCGCTAGGATCTGCCGTGAGTACGACGCGCTGTTCGTC GTGGACGCGATATCGTCGTTGGGTGGCGTCGAGTTCAGGATGGATGACTGGGGCGTCGACGTCTGCGTCACCGGTTCGCA GAAGGTCCTGGGCTGTCCGCCGGGTCTCGCACTCGTGGCCGTCAACGACAGGGCCTTGGAGGTCATGGAGGAGAAGGACG CGGGTAGCTACTACCTGGACATTCCCAAGTACCTCGAATACCTCGAGAAGGATCCGAAGCAGACGCCGTACACGCCCGCC GTGAACGCCTTCTACGCCCTGCACGAGGCACTGAAGAGGCTGAAGGAGGAAGGACTCGAGGCCCGCTGGGAGCGCTACCG TCTCATGCAACGGATCGTCCGCGAGGGGATCCGGGCACTCGGGCTCGAGTTGTTCGTCGAGGACGACGAGATAGCCTCGC CGACCGTGACCGGAGTCACCTACCCCGAGGGCGTGGACGACCGTGAGTTCAGGGGTGAGATCCTGCGGGACCGCTACGAC GTGGTGGTCGCCGGCGGTCAGGACCACCTAGCGGGTGAGATCTTCCGGATCGGACACATGGGTGAGGTCCGGATCCGCGA TATGATCACGGCGGTGACCTGCATCGGTCTCGGTATGCGCGAGCTCGGCGTCGACGTGGACGTCGGTGCCGCCGCCGAGG CTATGGCCGACGTGCTGTCAGAGGTATCGTAA
Upstream 100 bases:
>100_bases CTCCGACCACCCGGAAATAGGTTTCCGGTTAGGATTTAACAGGATCGGGCCCGCCGGGAAAGCCCACAGACCTGGGCGCG GTGTGAACGGGGTGTAGATC
Downstream 100 bases:
>100_bases CGGCCACCGCTCGGTGCCGGTGCCCTCCTCCAGCGCCCTCACACCGTCTATCACGTTCCCGTTCAACACGATCGCTACCG AGAATATCACCGTCCCCGGG
Product: aspartate aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MEKLVLLPGPVMVHEDVLLRSAKQVMNHRSEEFEEILTECVELSKYLFQTDGNVAIITGSGTAAMEAAIYSLLEPGEEVV AVVNGKFGERFADIAERRGAEVRRVEFEWGKVADPERVEEALADSDAEVVTLVHNETSTTVLNPAEEIARICREYDALFV VDAISSLGGVEFRMDDWGVDVCVTGSQKVLGCPPGLALVAVNDRALEVMEEKDAGSYYLDIPKYLEYLEKDPKQTPYTPA VNAFYALHEALKRLKEEGLEARWERYRLMQRIVREGIRALGLELFVEDDEIASPTVTGVTYPEGVDDREFRGEILRDRYD VVVAGGQDHLAGEIFRIGHMGEVRIRDMITAVTCIGLGMRELGVDVDVGAAAEAMADVLSEVS
Sequences:
>Translated_383_residues MEKLVLLPGPVMVHEDVLLRSAKQVMNHRSEEFEEILTECVELSKYLFQTDGNVAIITGSGTAAMEAAIYSLLEPGEEVV AVVNGKFGERFADIAERRGAEVRRVEFEWGKVADPERVEEALADSDAEVVTLVHNETSTTVLNPAEEIARICREYDALFV VDAISSLGGVEFRMDDWGVDVCVTGSQKVLGCPPGLALVAVNDRALEVMEEKDAGSYYLDIPKYLEYLEKDPKQTPYTPA VNAFYALHEALKRLKEEGLEARWERYRLMQRIVREGIRALGLELFVEDDEIASPTVTGVTYPEGVDDREFRGEILRDRYD VVVAGGQDHLAGEIFRIGHMGEVRIRDMITAVTCIGLGMRELGVDVDVGAAAEAMADVLSEVS >Mature_383_residues MEKLVLLPGPVMVHEDVLLRSAKQVMNHRSEEFEEILTECVELSKYLFQTDGNVAIITGSGTAAMEAAIYSLLEPGEEVV AVVNGKFGERFADIAERRGAEVRRVEFEWGKVADPERVEEALADSDAEVVTLVHNETSTTVLNPAEEIARICREYDALFV VDAISSLGGVEFRMDDWGVDVCVTGSQKVLGCPPGLALVAVNDRALEVMEEKDAGSYYLDIPKYLEYLEKDPKQTPYTPA VNAFYALHEALKRLKEEGLEARWERYRLMQRIVREGIRALGLELFVEDDEIASPTVTGVTYPEGVDDREFRGEILRDRYD VVVAGGQDHLAGEIFRIGHMGEVRIRDMITAVTCIGLGMRELGVDVDVGAAAEAMADVLSEVS
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=358, Percent_Identity=34.9162011173184, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17536281, Length=339, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6321079, Length=355, Percent_Identity=28.4507042253521, Blast_Score=132, Evalue=8e-32, Organism=Drosophila melanogaster, GI17530823, Length=376, Percent_Identity=34.0425531914894, Blast_Score=199, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 42405; Mature: 42405
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLVLLPGPVMVHEDVLLRSAKQVMNHRSEEFEEILTECVELSKYLFQTDGNVAIITGS CCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC GTAAMEAAIYSLLEPGEEVVAVVNGKFGERFADIAERRGAEVRRVEFEWGKVADPERVEE CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH ALADSDAEVVTLVHNETSTTVLNPAEEIARICREYDALFVVDAISSLGGVEFRMDDWGVD HHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCCCEE VCVTGSQKVLGCPPGLALVAVNDRALEVMEEKDAGSYYLDIPKYLEYLEKDPKQTPYTPA EEEECCCEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHH VNAFYALHEALKRLKEEGLEARWERYRLMQRIVREGIRALGLELFVEDDEIASPTVTGVT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCEEECCC YPEGVDDREFRGEILRDRYDVVVAGGQDHLAGEIFRIGHMGEVRIRDMITAVTCIGLGMR CCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHCCHH ELGVDVDVGAAAEAMADVLSEVS HHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEKLVLLPGPVMVHEDVLLRSAKQVMNHRSEEFEEILTECVELSKYLFQTDGNVAIITGS CCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC GTAAMEAAIYSLLEPGEEVVAVVNGKFGERFADIAERRGAEVRRVEFEWGKVADPERVEE CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH ALADSDAEVVTLVHNETSTTVLNPAEEIARICREYDALFVVDAISSLGGVEFRMDDWGVD HHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCCCEE VCVTGSQKVLGCPPGLALVAVNDRALEVMEEKDAGSYYLDIPKYLEYLEKDPKQTPYTPA EEEECCCEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHH VNAFYALHEALKRLKEEGLEARWERYRLMQRIVREGIRALGLELFVEDDEIASPTVTGVT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCEEECCC YPEGVDDREFRGEILRDRYDVVVAGGQDHLAGEIFRIGHMGEVRIRDMITAVTCIGLGMR CCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHCCHH ELGVDVDVGAAAEAMADVLSEVS HHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]