Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is guaB [H]
Identifier: 18311258
GI number: 18311258
Start: 2616682
End: 2618136
Strand: Reverse
Name: guaB [H]
Synonym: CPE2276
Alternate gene names: 18311258
Gene position: 2618136-2616682 (Counterclockwise)
Preceding gene: 18311259
Following gene: 18311257
Centisome position: 86.37
GC content: 33.75
Gene sequence:
>1455_bases ATGGCAAGAATATTAAAAACAGCATATACATTTGATGATGTATTACTAGTACCAAACAAATCAGAGGTCCTACCTAATGA GGTTTCTTTAAAAACTCAATTAACTAAAAAAATTCAATTAAATATTCCATTAATGAGTGCAAGTATGGATACAGTTACTG AATCTAAAATGGCAATAGCTATGGCTAGAGAAGGTGGAATAGGAATAATCCATAAAAACATGACAATAGAAGATCAAGCA AGAGAAGTTGATAGAGTAAAAAGACAAGAAAATGGAGTAATAACAGATCCAATATTCTTATCAGAAGATCACACAGTAAG AGAAGCTTTAGATTTAATGGCTCAATACAGAATTTCAGGAGTTCCTGTAACAAGAGAAGGAAAACTAGTTGGAATCATAA CAAACAGAGACATAGTATTTGAAACAAATTACGATAAAAAAGTTTCAGAGGTTATGACAAAAAGTCCATTAGTTACTGCG AAAGAAGGAACTACATTAACTGAAGCATTAGAAATATTAAAGCAACATAAAATAGAAAAGCTTCCTTTAGTTGATGATGA AAATAATCTAAAAGGACTTATAACTATAAAAGATATAGAAAAAGCTAAAGCTTTCCCAAATGCAGCTAAAGATGAAAAAG GAAGACTTTTATGTGGAGCTTCAATTGGTGTAACTAATGACATGATGGAAAGAGTAGATGCAGTAGTTAAAGCAAAGGTT GACGTTATTGTTTTAGATACAGCTCATGGTCATTCAAAAGGAGTTATTGAAGGAGTTAAGAGAATAAAAGCTAAATATCC TGAACTTCAAGTAATAGCTGGTAACATAGCTACACCAGAGGCTGTAAGAGATTTAGCAGAAGCAGGTGCAGATTGTGTTA AAGTAGGTATAGGACCTGGATCAATATGTACTACAAGAATAGTTGCAGGTGTTGGTGTTCCTCAATTAACAGCAGTTATG GATTGTGCTGAAGAAGGTAAAAAATTAGGAATACCAGTAATAGCTGACGGTGGATTAAAATATTCAGGAGATATAGTTAA GGCTTTAGCAGCTGGAGCTTGTGCAGCTATGATGGGATCAATCTTTGCAGGATGTGAAGAAGCACCAGGAGCTATAGAAA TATATCAAGGTAGAAGCTATAAAGTTTACAGAGGAATGGGTTCACTTGGAGCTATGGCTAAAGGATCAAGTGATAGATAT TTCCAAAATGGTACTAAGAAATTCGTTCCAGAAGGTGTAGAAGGAAGAATTGCTTACAAAGGACATTTAGCAGATACTAT CTACCAACTAATAGGTGGAATAAAATCAGGAATGGGTTACTTAGGAGCACCAACTTTGGAAAATTTATATGAAAATGCTA ATTTTGTTGTTCAAACTTCAGCAGGATTTAGAGAAAGTCACCCTCATGATATAAACATAACTAAGGAAGCACCAAACTAC AGTGTTAACCAATAA
Upstream 100 bases:
>100_bases GTTTGCTTTCAAAAAATAAGTAGAAGTTTAAAAGGTAGAAATACGGAAAAACATTTAATTGTACGTAAATAACTTAAAGA TAGTGTGTGGAGGCGATAGT
Downstream 100 bases:
>100_bases TTAGATTAAAAGCTTCAGCAAAATGTTAAAATATATATTAAGTTTTAACATTTTGTTGAATATATTTTATACATAAACGG AAAATGAAATTGTGGAGGAA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MARILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIAMAREGGIGIIHKNMTIEDQA REVDRVKRQENGVITDPIFLSEDHTVREALDLMAQYRISGVPVTREGKLVGIITNRDIVFETNYDKKVSEVMTKSPLVTA KEGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEKAKAFPNAAKDEKGRLLCGASIGVTNDMMERVDAVVKAKV DVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGVPQLTAVM DCAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMAKGSSDRY FQNGTKKFVPEGVEGRIAYKGHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNY SVNQ
Sequences:
>Translated_484_residues MARILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIAMAREGGIGIIHKNMTIEDQA REVDRVKRQENGVITDPIFLSEDHTVREALDLMAQYRISGVPVTREGKLVGIITNRDIVFETNYDKKVSEVMTKSPLVTA KEGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEKAKAFPNAAKDEKGRLLCGASIGVTNDMMERVDAVVKAKV DVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGVPQLTAVM DCAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMAKGSSDRY FQNGTKKFVPEGVEGRIAYKGHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNY SVNQ >Mature_483_residues ARILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIAMAREGGIGIIHKNMTIEDQAR EVDRVKRQENGVITDPIFLSEDHTVREALDLMAQYRISGVPVTREGKLVGIITNRDIVFETNYDKKVSEVMTKSPLVTAK EGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEKAKAFPNAAKDEKGRLLCGASIGVTNDMMERVDAVVKAKVD VIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGVPQLTAVMD CAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMAKGSSDRYF QNGTKKFVPEGVEGRIAYKGHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNYS VNQ
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=45, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI34328928, Length=449, Percent_Identity=47.2160356347439, Blast_Score=371, Evalue=1e-102, Organism=Homo sapiens, GI156616279, Length=449, Percent_Identity=47.2160356347439, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI34328930, Length=449, Percent_Identity=47.2160356347439, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI217035152, Length=446, Percent_Identity=47.3094170403587, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=446, Percent_Identity=45.9641255605381, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=44.375, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=41.875, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI156104880, Length=239, Percent_Identity=39.3305439330544, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI50541954, Length=240, Percent_Identity=38.75, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541952, Length=240, Percent_Identity=38.75, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541948, Length=240, Percent_Identity=38.75, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541956, Length=240, Percent_Identity=38.75, Blast_Score=165, Evalue=7e-41, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=58.0246913580247, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI1786293, Length=261, Percent_Identity=32.5670498084291, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71994385, Length=478, Percent_Identity=38.2845188284519, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI71994389, Length=424, Percent_Identity=40.0943396226415, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17560440, Length=276, Percent_Identity=37.3188405797101, Blast_Score=174, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322012, Length=484, Percent_Identity=41.7355371900826, Blast_Score=346, Evalue=5e-96, Organism=Saccharomyces cerevisiae, GI6323585, Length=488, Percent_Identity=41.1885245901639, Blast_Score=340, Evalue=4e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=479, Percent_Identity=42.5887265135699, Blast_Score=338, Evalue=1e-93, Organism=Saccharomyces cerevisiae, GI6319352, Length=379, Percent_Identity=42.4802110817942, Blast_Score=276, Evalue=5e-75, Organism=Saccharomyces cerevisiae, GI6319353, Length=114, Percent_Identity=37.719298245614, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641071, Length=477, Percent_Identity=41.0901467505241, Blast_Score=331, Evalue=7e-91, Organism=Drosophila melanogaster, GI24641073, Length=477, Percent_Identity=41.0901467505241, Blast_Score=331, Evalue=7e-91, Organism=Drosophila melanogaster, GI28571163, Length=438, Percent_Identity=41.5525114155251, Blast_Score=302, Evalue=3e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52094; Mature: 51963
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIA CCCHHHHHCCCCCEEECCCCCCCCCCCHHHHHHEEEEEEEECEEEECCHHHHHHHHEEEE MAREGGIGIIHKNMTIEDQAREVDRVKRQENGVITDPIFLSEDHTVREALDLMAQYRISG EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEECCEEECCCCHHHHHHHHHHHHHHCC VPVTREGKLVGIITNRDIVFETNYDKKVSEVMTKSPLVTAKEGTTLTEALEILKQHKIEK CCEECCCCEEEEEECCEEEEECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC LPLVDDENNLKGLITIKDIEKAKAFPNAAKDEKGRLLCGASIGVTNDMMERVDAVVKAKV CCCCCCCCCCEEEEEEEECHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCEE DVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPG EEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCC SICTTRIVAGVGVPQLTAVMDCAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHH IFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMAKGSSDRYFQNGTKKFVPEGVEGRIAYK HHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCEEEEE GHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNY CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCC SVNQ CCCC >Mature Secondary Structure ARILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIA CCHHHHHCCCCCEEECCCCCCCCCCCHHHHHHEEEEEEEECEEEECCHHHHHHHHEEEE MAREGGIGIIHKNMTIEDQAREVDRVKRQENGVITDPIFLSEDHTVREALDLMAQYRISG EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEECCEEECCCCHHHHHHHHHHHHHHCC VPVTREGKLVGIITNRDIVFETNYDKKVSEVMTKSPLVTAKEGTTLTEALEILKQHKIEK CCEECCCCEEEEEECCEEEEECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC LPLVDDENNLKGLITIKDIEKAKAFPNAAKDEKGRLLCGASIGVTNDMMERVDAVVKAKV CCCCCCCCCCEEEEEEEECHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCEE DVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPG EEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCC SICTTRIVAGVGVPQLTAVMDCAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHH IFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMAKGSSDRYFQNGTKKFVPEGVEGRIAYK HHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCEEEEE GHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNY CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCC SVNQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]