Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18311243
Identifier: 18311243
GI number: 18311243
Start: 2598553
End: 2599341
Strand: Reverse
Name: 18311243
Synonym: CPE2261
Alternate gene names: NA
Gene position: 2599341-2598553 (Counterclockwise)
Preceding gene: 18311244
Following gene: 18311242
Centisome position: 85.75
GC content: 27.12
Gene sequence:
>789_bases GTGATTAGTAAGAATAAAATTATAGCATTAATTTTAGGAGTTTCACTTGCTTCAAGTGCTACTTATGGAAGTTATGCTTA TTTTAGTGGAGAGTATTCAGTAAAAAATACGGTTAAAATAGTTGAGTTAGATCCTAAGGAAAGTCCTTTTGAAATTTCAA AGATAAGCACTAGAGAAAACTCTCTTGTATTAGAGTTTTCTAAAAAAGTCTTCTACAGTGGAGAGAATATAAATAGTGAT ATTGTTGGAAGTGAAACTTTTTTAGATAATGTTGAAATTTCAATAGAGGGAAAGGAAATTATAATAAGTAAAAAGGATGG AGAATTTTTAATTCCTGTTGGAATAGAAAATAATTTGCCAAGTATAAAATTAAATAGTAATTTTGAAGATAGATTTGGTA AGGATTTAGAAGAAATAACTTTATACTTATATGAAGATTCTAATGGAAACATCACATGGAGTTTAACTAATGATCAAAAT GGTAATAAAGAAAGTCAATCTAATAATGAGATTAAGGGAGATGAAGGGGTTAAACCTAATAGTGAGATTAAAGAGGAGGT TATAGATCAACCTAATAATGAAGTTAAAGAAGAATCTTCAATAGAAAATTCTAATAATGAAGTTGAAAATATTGAGACTC CAAAAAGTGGAGATGAAAATACTACACCTGTAGAAGGAGAGAATTTACCTAAGGAAGAAAATTTAGAGCAAGAAAATATT AATGAAAATGAGCTAAATAAATCTTTAGGAGAGGGAGAAATTTCAAATAATCTTACTAATATTAATTAA
Upstream 100 bases:
>100_bases CAAAGAGATATGCCAGAGAATTATTCTAATGCAGAATTTAAATTTGATTTAAATATAGGGTATGCTCAGGAAAATAGTAA ATAGTAGAGGAGGAGTTTAA
Downstream 100 bases:
>100_bases GAAAAAATATATGAAATAAATTAAAGAGGTAAATTTAAAAGATTATATTTAAAGTAAGAGTATTATATTTGAAATAAATG GTCACATTTTATAATGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MISKNKIIALILGVSLASSATYGSYAYFSGEYSVKNTVKIVELDPKESPFEISKISTRENSLVLEFSKKVFYSGENINSD IVGSETFLDNVEISIEGKEIIISKKDGEFLIPVGIENNLPSIKLNSNFEDRFGKDLEEITLYLYEDSNGNITWSLTNDQN GNKESQSNNEIKGDEGVKPNSEIKEEVIDQPNNEVKEESSIENSNNEVENIETPKSGDENTTPVEGENLPKEENLEQENI NENELNKSLGEGEISNNLTNIN
Sequences:
>Translated_262_residues MISKNKIIALILGVSLASSATYGSYAYFSGEYSVKNTVKIVELDPKESPFEISKISTRENSLVLEFSKKVFYSGENINSD IVGSETFLDNVEISIEGKEIIISKKDGEFLIPVGIENNLPSIKLNSNFEDRFGKDLEEITLYLYEDSNGNITWSLTNDQN GNKESQSNNEIKGDEGVKPNSEIKEEVIDQPNNEVKEESSIENSNNEVENIETPKSGDENTTPVEGENLPKEENLEQENI NENELNKSLGEGEISNNLTNIN >Mature_262_residues MISKNKIIALILGVSLASSATYGSYAYFSGEYSVKNTVKIVELDPKESPFEISKISTRENSLVLEFSKKVFYSGENINSD IVGSETFLDNVEISIEGKEIIISKKDGEFLIPVGIENNLPSIKLNSNFEDRFGKDLEEITLYLYEDSNGNITWSLTNDQN GNKESQSNNEIKGDEGVKPNSEIKEEVIDQPNNEVKEESSIENSNNEVENIETPKSGDENTTPVEGENLPKEENLEQENI NENELNKSLGEGEISNNLTNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29171; Mature: 29171
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKNKIIALILGVSLASSATYGSYAYFSGEYSVKNTVKIVELDPKESPFEISKISTREN CCCCCEEEEEEEECHHHCCCCCCCEEEEECCEECCCEEEEEEECCCCCCEEEEEECCCCC SLVLEFSKKVFYSGENINSDIVGSETFLDNVEISIEGKEIIISKKDGEFLIPVGIENNLP CEEEEEECEEEECCCCCCCCCCCCCEEECCEEEEEECCEEEEEECCCCEEEEECCCCCCC SIKLNSNFEDRFGKDLEEITLYLYEDSNGNITWSLTNDQNGNKESQSNNEIKGDEGVKPN EEEECCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC SEIKEEVIDQPNNEVKEESSIENSNNEVENIETPKSGDENTTPVEGENLPKEENLEQENI HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC NENELNKSLGEGEISNNLTNIN CHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MISKNKIIALILGVSLASSATYGSYAYFSGEYSVKNTVKIVELDPKESPFEISKISTREN CCCCCEEEEEEEECHHHCCCCCCCEEEEECCEECCCEEEEEEECCCCCCEEEEEECCCCC SLVLEFSKKVFYSGENINSDIVGSETFLDNVEISIEGKEIIISKKDGEFLIPVGIENNLP CEEEEEECEEEECCCCCCCCCCCCCEEECCEEEEEECCEEEEEECCCCEEEEECCCCCCC SIKLNSNFEDRFGKDLEEITLYLYEDSNGNITWSLTNDQNGNKESQSNNEIKGDEGVKPN EEEECCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC SEIKEEVIDQPNNEVKEESSIENSNNEVENIETPKSGDENTTPVEGENLPKEENLEQENI HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC NENELNKSLGEGEISNNLTNIN CHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA