Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18311244
Identifier: 18311244
GI number: 18311244
Start: 2599358
End: 2599906
Strand: Reverse
Name: 18311244
Synonym: CPE2262
Alternate gene names: NA
Gene position: 2599906-2599358 (Counterclockwise)
Preceding gene: 18311245
Following gene: 18311243
Centisome position: 85.77
GC content: 27.87
Gene sequence:
>549_bases ATGAAAACCCTTAAGATGAGAAGAATAATTTCATTAGTATTAGCTATAGGGATAACAGGAGGTTTAGGAAGTGTAGCCTA TTTTTCAGATAAAGAAAACGTAAACGGTGATTTAAAGTTAACTTTAGGAACATTAAGTTCTGAGGCTACAAAAACAGTTA AAATAGAGAAAATGGACATAGAAGTTCCTGTTAGTGATACTTTTATAATAACTAATAATGGAACTTTAGATCAAAGGATG ACATTAAATTTTAAAAATTCATCAATAGGAAATGATGGACTAGAGAAAATAAAGTATTCCTTAAGTTTTGAAAGTAGTGA AAATAGAAATATACAAGGGTATGGAAATGGAGAAGAGACATTACTTTCACTATTTAATAAAAATATTCAATTATTGGATG CAGAGGGTAATGAAGTAGTTTTAAATGATGGTGAAGTTTTAACTGCTACATTAACATTAAATATGCAAAGAGATATGCCA GAGAATTATTCTAATGCAGAATTTAAATTTGATTTAAATATAGGGTATGCTCAGGAAAATAGTAAATAG
Upstream 100 bases:
>100_bases GGGGGCTTTAGCAATAACAATTTTATGGTTTTTGGAGTTCTAGCTTTAGGTATAGGAGCATCAATATTAAAGTTACCTCA AAAAAAGGAGGAGATTTAAT
Downstream 100 bases:
>100_bases TAGAGGAGGAGTTTAAGTGATTAGTAAGAATAAAATTATAGCATTAATTTTAGGAGTTTCACTTGCTTCAAGTGCTACTT ATGGAAGTTATGCTTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKTLKMRRIISLVLAIGITGGLGSVAYFSDKENVNGDLKLTLGTLSSEATKTVKIEKMDIEVPVSDTFIITNNGTLDQRM TLNFKNSSIGNDGLEKIKYSLSFESSENRNIQGYGNGEETLLSLFNKNIQLLDAEGNEVVLNDGEVLTATLTLNMQRDMP ENYSNAEFKFDLNIGYAQENSK
Sequences:
>Translated_182_residues MKTLKMRRIISLVLAIGITGGLGSVAYFSDKENVNGDLKLTLGTLSSEATKTVKIEKMDIEVPVSDTFIITNNGTLDQRM TLNFKNSSIGNDGLEKIKYSLSFESSENRNIQGYGNGEETLLSLFNKNIQLLDAEGNEVVLNDGEVLTATLTLNMQRDMP ENYSNAEFKFDLNIGYAQENSK >Mature_182_residues MKTLKMRRIISLVLAIGITGGLGSVAYFSDKENVNGDLKLTLGTLSSEATKTVKIEKMDIEVPVSDTFIITNNGTLDQRM TLNFKNSSIGNDGLEKIKYSLSFESSENRNIQGYGNGEETLLSLFNKNIQLLDAEGNEVVLNDGEVLTATLTLNMQRDMP ENYSNAEFKFDLNIGYAQENSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20117; Mature: 20117
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKMRRIISLVLAIGITGGLGSVAYFSDKENVNGDLKLTLGTLSSEATKTVKIEKMDI CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEE EVPVSDTFIITNNGTLDQRMTLNFKNSSIGNDGLEKIKYSLSFESSENRNIQGYGNGEET EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHEEEEEEECCCCCCEEEEECCCHHH LLSLFNKNIQLLDAEGNEVVLNDGEVLTATLTLNMQRDMPENYSNAEFKFDLNIGYAQEN HHHHHCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCC SK CC >Mature Secondary Structure MKTLKMRRIISLVLAIGITGGLGSVAYFSDKENVNGDLKLTLGTLSSEATKTVKIEKMDI CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEE EVPVSDTFIITNNGTLDQRMTLNFKNSSIGNDGLEKIKYSLSFESSENRNIQGYGNGEET EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHEEEEEEECCCCCCEEEEECCCHHH LLSLFNKNIQLLDAEGNEVVLNDGEVLTATLTLNMQRDMPENYSNAEFKFDLNIGYAQEN HHHHHCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCC SK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA