| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ywrA [H]
Identifier: 18311230
GI number: 18311230
Start: 2579928
End: 2580497
Strand: Reverse
Name: ywrA [H]
Synonym: CPE2248
Alternate gene names: 18311230
Gene position: 2580497-2579928 (Counterclockwise)
Preceding gene: 18311231
Following gene: 18311229
Centisome position: 85.12
GC content: 28.25
Gene sequence:
>570_bases ATGATACTAATTAGATTATTTTTAGAATTTTTTAAAGTTGGTCTTTTTGCCGTAGGCGGTGGAGCTGCTACTATACCATT TCTATATAATATTTCAGATAAAACACATTGGTTTACTCATACTGATCTTGCAAACATGATTGCAATATCTCAATCAGTAC CAGGTGCTATGGGAATCAATATGGCAACTTATGTTGGTTATGCAACTTATGGAGTTTTAGGTGCTATTACCTCAACCATA GGTATTATAGTACCTTCAATAATTATAATTTTAATTGTAGCGAGAGTCTTAGCAAAATTTAAAGAAAATAAAAGAGTGGC TGATTGTTTTTATGGATTAAGACCAGCATCAACAGGCCTTTTACTTGCTGCAGGCTTTGAAATAGTAAAAATATCAATAT TAACTTTAAATAAATATGCAGAAACACATAATATTGCAGATATATTATCAATTAAAGCTTTAATACTAGCAGGAATTTTA TTCTTTTTTATAAGAAAATATAAAAAGTCACCAATTTTTTATATTATTGCCTCAGCTATAGTAGGTATAATATTTAATTT TGCTAAATAA
Upstream 100 bases:
>100_bases GTAGCTGGATTTTCTATATTTACAGATATATCTCCTGTTTTATATGTAATAATAGCAGGAATAGCAGGAATAGTATTAAG ATCAATTGGAGGTAAAAAGA
Downstream 100 bases:
>100_bases TAAAGAAAAAATAAATAATAATTTAGAAGTAAAAGATATTTATTTTTTTAAAAGATAAAAGTATTAAAGAAACTTATTTT AATAATAGGATTCTTTAATA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL FFFIRKYKKSPIFYIIASAIVGIIFNFAK
Sequences:
>Translated_189_residues MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL FFFIRKYKKSPIFYIIASAIVGIIFNFAK >Mature_189_residues MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL FFFIRKYKKSPIFYIIASAIVGIIFNFAK
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20616; Mature: 20616
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGIN CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCH MATYVGYATYGVLGAITSTIGIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE LLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGILFFFIRKYKKSPIFYIIASAI EEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VGIIFNFAK HHHHHHCCC >Mature Secondary Structure MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGIN CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCH MATYVGYATYGVLGAITSTIGIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE LLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGILFFFIRKYKKSPIFYIIASAI EEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VGIIFNFAK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]