| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is chrA1 [H]
Identifier: 18311231
GI number: 18311231
Start: 2580484
End: 2581035
Strand: Reverse
Name: chrA1 [H]
Synonym: CPE2249
Alternate gene names: 18311231
Gene position: 2581035-2580484 (Counterclockwise)
Preceding gene: 18311233
Following gene: 18311230
Centisome position: 85.14
GC content: 27.17
Gene sequence:
>552_bases ATGAAAGAATTAATTAATTTATATTTTCTTTTTATAAAATTAGGATTTATGAATTTTGGAGGGGGATATGCTTTATTTCC AATATTACAAAAAGAAATAATTGAAAAAAGAAATTGGATTACTAATGAAGAGTTAATGGATTACTATGCAATTGGTCAGT GTACCCCAGGAGTAATTGCAGTAAATACAGCCACATTTATAGGTCATAAAAGAAAAGGAAATATAGGAGGGATACTGGCA ACTCTTGGTTTTGTTACTCCATCATTAATAATGATAACAATAATTGCTACATTTATTGGAAACTTTTCAGATCTTCCAAT AGTTAAGAATGCCTTTGCTGGGATTCGTGTATGTGTAGCAGTATTAATTTTAAATACAGCAATAAATTTAATTAAGACAT CAGTAATTGATATTAAAACATGTATTATTTTTGTATTAGTAGCTGGATTTTCTATATTTACAGATATATCTCCTGTTTTA TATGTAATAATAGCAGGAATAGCAGGAATAGTATTAAGATCAATTGGAGGTAAAAAGAATGATACTAATTAG
Upstream 100 bases:
>100_bases TTATATATTACACAAAGCCTTATACATATTAATTATAATGAAAAATTTTTATACATATTATAATCTTTAAATATTTAGAC AATAGAAAGGAGCTTTATAT
Downstream 100 bases:
>100_bases ATTATTTTTAGAATTTTTTAAAGTTGGTCTTTTTGCCGTAGGCGGTGGAGCTGCTACTATACCATTTCTATATAATATTT CAGATAAAACACATTGGTTT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKELINLYFLFIKLGFMNFGGGYALFPILQKEIIEKRNWITNEELMDYYAIGQCTPGVIAVNTATFIGHKRKGNIGGILA TLGFVTPSLIMITIIATFIGNFSDLPIVKNAFAGIRVCVAVLILNTAINLIKTSVIDIKTCIIFVLVAGFSIFTDISPVL YVIIAGIAGIVLRSIGGKKNDTN
Sequences:
>Translated_183_residues MKELINLYFLFIKLGFMNFGGGYALFPILQKEIIEKRNWITNEELMDYYAIGQCTPGVIAVNTATFIGHKRKGNIGGILA TLGFVTPSLIMITIIATFIGNFSDLPIVKNAFAGIRVCVAVLILNTAINLIKTSVIDIKTCIIFVLVAGFSIFTDISPVL YVIIAGIAGIVLRSIGGKKNDTN >Mature_183_residues MKELINLYFLFIKLGFMNFGGGYALFPILQKEIIEKRNWITNEELMDYYAIGQCTPGVIAVNTATFIGHKRKGNIGGILA TLGFVTPSLIMITIIATFIGNFSDLPIVKNAFAGIRVCVAVLILNTAINLIKTSVIDIKTCIIFVLVAGFSIFTDISPVL YVIIAGIAGIVLRSIGGKKNDTN
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 19893; Mature: 19893
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELINLYFLFIKLGFMNFGGGYALFPILQKEIIEKRNWITNEELMDYYAIGQCTPGVIA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE VNTATFIGHKRKGNIGGILATLGFVTPSLIMITIIATFIGNFSDLPIVKNAFAGIRVCVA ECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VLILNTAINLIKTSVIDIKTCIIFVLVAGFSIFTDISPVLYVIIAGIAGIVLRSIGGKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DTN CCC >Mature Secondary Structure MKELINLYFLFIKLGFMNFGGGYALFPILQKEIIEKRNWITNEELMDYYAIGQCTPGVIA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE VNTATFIGHKRKGNIGGILATLGFVTPSLIMITIIATFIGNFSDLPIVKNAFAGIRVCVA ECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VLILNTAINLIKTSVIDIKTCIIFVLVAGFSIFTDISPVLYVIIAGIAGIVLRSIGGKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DTN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]