Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311229

Identifier: 18311229

GI number: 18311229

Start: 2573650

End: 2574219

Strand: Reverse

Name: 18311229

Synonym: CPE2247

Alternate gene names: NA

Gene position: 2574219-2573650 (Counterclockwise)

Preceding gene: 18311230

Following gene: 18311228

Centisome position: 84.92

GC content: 24.91

Gene sequence:

>570_bases
ATGAAAGGAATAAAGAAAATATTATCATTAGGTTTGCTTTTAGTATTTTCATTTTCAATGGTATCTTGTGGTGGATCAAA
AGAAAATACTTTAGAGGGTACAGTAGTAGTAACAAGTAAATATCCTGATGAAGTTAATAGTTATATAGCTGAAGAATTTA
AAAAAGAAACTGGAATATCAGTTAAATATGAAGTAAAAGATGAAATAAAAGAAGATGATTTTAAAAATTCTAATACTGAT
ATTATATTAGGTGGAGATAATGAATTATATAAAAAAATGGCTTCAGATAATATTCTTAAAGGATATAAAACAAGTTGGTA
TAGTGATGTAGATGATAATTATAGAGATAAAGATGGATATTGGTATTCAATATTTAGAAACCCTATGGTAGTTGCTTATA
ATAAAGCTAACTTAGCAGCGAATCTTGCACCAAAGAGTTTATCTGATTTAAAAAATGGGAATTTAGCTAATAAATTATTA
ATGGTAAATTCTAATAATGATTATACAAAGTATTTTATATCTGCTACGGCTTCTTATTTAAGTAAAGAAGCAATAATGAT
GATAATATAG

Upstream 100 bases:

>100_bases
TATATTATATAAATTAGTGGTAAAATAATTTATACTTAAGTTAGTTAAGAATGTAAAAAAGAGTTTTAATTATATTTTTA
TAGTATTTGGGAGGAGAGTA

Downstream 100 bases:

>100_bases
GAAGTACTTTCTTACAAGGTGTAAAGTTAAATGTGGCTACATTTTTTAATAATTACGAAGAATTATTTACAGCTTTAGAC
ACTAAAGAAACTCCAATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKGIKKILSLGLLLVFSFSMVSCGGSKENTLEGTVVVTSKYPDEVNSYIAEEFKKETGISVKYEVKDEIKEDDFKNSNTD
IILGGDNELYKKMASDNILKGYKTSWYSDVDDNYRDKDGYWYSIFRNPMVVAYNKANLAANLAPKSLSDLKNGNLANKLL
MVNSNNDYTKYFISATASYLSKEAIMMII

Sequences:

>Translated_189_residues
MKGIKKILSLGLLLVFSFSMVSCGGSKENTLEGTVVVTSKYPDEVNSYIAEEFKKETGISVKYEVKDEIKEDDFKNSNTD
IILGGDNELYKKMASDNILKGYKTSWYSDVDDNYRDKDGYWYSIFRNPMVVAYNKANLAANLAPKSLSDLKNGNLANKLL
MVNSNNDYTKYFISATASYLSKEAIMMII
>Mature_189_residues
MKGIKKILSLGLLLVFSFSMVSCGGSKENTLEGTVVVTSKYPDEVNSYIAEEFKKETGISVKYEVKDEIKEDDFKNSNTD
IILGGDNELYKKMASDNILKGYKTSWYSDVDDNYRDKDGYWYSIFRNPMVVAYNKANLAANLAPKSLSDLKNGNLANKLL
MVNSNNDYTKYFISATASYLSKEAIMMII

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21268; Mature: 21268

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIKKILSLGLLLVFSFSMVSCGGSKENTLEGTVVVTSKYPDEVNSYIAEEFKKETGIS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCE
VKYEVKDEIKEDDFKNSNTDIILGGDNELYKKMASDNILKGYKTSWYSDVDDNYRDKDGY
EEEEEHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCE
WYSIFRNPMVVAYNKANLAANLAPKSLSDLKNGNLANKLLMVNSNNDYTKYFISATASYL
EEEEECCCEEEEEECCCEEECCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
SKEAIMMII
CCCEEEEEC
>Mature Secondary Structure
MKGIKKILSLGLLLVFSFSMVSCGGSKENTLEGTVVVTSKYPDEVNSYIAEEFKKETGIS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCE
VKYEVKDEIKEDDFKNSNTDIILGGDNELYKKMASDNILKGYKTSWYSDVDDNYRDKDGY
EEEEEHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCE
WYSIFRNPMVVAYNKANLAANLAPKSLSDLKNGNLANKLLMVNSNNDYTKYFISATASYL
EEEEECCCEEEEEECCCEEECCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
SKEAIMMII
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA