| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cotS [H]
Identifier: 18311200
GI number: 18311200
Start: 2540029
End: 2541033
Strand: Reverse
Name: cotS [H]
Synonym: CPE2218
Alternate gene names: 18311200
Gene position: 2541033-2540029 (Counterclockwise)
Preceding gene: 18311202
Following gene: 18311199
Centisome position: 83.82
GC content: 27.56
Gene sequence:
>1005_bases ATGATGAGAGAGTTTGAAATAGAAAGACAATTTGATATTAAAATAGAAAAATTAAAACCTAATAAGGGTGTATATTATTT AAAGAGTAATAAGGGTGACAGGTGTTTAAAAAGGATAAACTATGGAACTCAAAAACTTCTTTTCGTTTATGGAGCAAAGG AGCATTTAGCTAAAAATGGATTTGAACATATAGATAGATATTTCTTAAATATTGAAGATGAACCTTATGCTCTAGTAAAT GAGGATTTATATACTCTTTCAAATTGGATAAAGGGAAGAGAGTGTGATTTCACTAACATAGAAGAGGTTAAATTAGCTGC TAAAAAGTTAGCTGAATTACATGAAGCCAGCAAGGGATATGATCCACCAGAAAACTCAAAATTAAAAAGTGACTTAGGAA GATGGACATATCTTATGGAGAAGAGAGGTAAAGCCTTAGAAAAAATGAGAGGAATGGCTAGAAAGAAGAATTTAAAAAAA GATTTTGACATTATTTATATAAAAAATGTTGATTTTTATAAGGAGTTAGCAATAAGAGCCACAAAAATATTAAATAATTC AAAGTATTTAAGTTTATGTGAGGAAGCAGAGGCTGAGAAAGTATTTTGTCATCATGATTATACTTATCACAATATAATAA TTGGAGATGATAATGAAGTATATATAATAGACTTTGATTATTGTAAAAGAGAAATAAGAACATATGACATAGCTAACTTC ATGAAGAAGGTTTTAAAAAGAGTTGACTGGAATATTGAATATGCAGAGGCCATAATAGATGCTTATAATACAGTAAGTCC ATTAAGAGAAGAAGAATATGAGGTATTATATGCATACTTGTTATTCCCACAAAGATATTGGAGACTTGCAAATAGATACT ATTACAATGAAGTTATGTGGGGACAAAATATCTTTATAAATAAAATAAACAACATAATTAATGAGAAAGAAAGTTATATG AAATTTATTGAAGAATTTAAAAGTAAATATAACCAAGTTGGATAA
Upstream 100 bases:
>100_bases TCCTTTCAGTATAAATATATATTATTATATTTATATATGGAATAAAATGTTAATAAAACAAGAGGTTGTTACATATAAAT ATGGTAGGGGGTGAATAGAT
Downstream 100 bases:
>100_bases TTATATTTTAGGTGCCTACTAATTAGGCACCATTTTTTATTTTGCTTTATAGTTGATTTAATATTAATTTTATTGGATTT TTAATAGATATTTTTTAATT
Product: spore coat protein CotS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MMREFEIERQFDIKIEKLKPNKGVYYLKSNKGDRCLKRINYGTQKLLFVYGAKEHLAKNGFEHIDRYFLNIEDEPYALVN EDLYTLSNWIKGRECDFTNIEEVKLAAKKLAELHEASKGYDPPENSKLKSDLGRWTYLMEKRGKALEKMRGMARKKNLKK DFDIIYIKNVDFYKELAIRATKILNNSKYLSLCEEAEAEKVFCHHDYTYHNIIIGDDNEVYIIDFDYCKREIRTYDIANF MKKVLKRVDWNIEYAEAIIDAYNTVSPLREEEYEVLYAYLLFPQRYWRLANRYYYNEVMWGQNIFINKINNIINEKESYM KFIEEFKSKYNQVG
Sequences:
>Translated_334_residues MMREFEIERQFDIKIEKLKPNKGVYYLKSNKGDRCLKRINYGTQKLLFVYGAKEHLAKNGFEHIDRYFLNIEDEPYALVN EDLYTLSNWIKGRECDFTNIEEVKLAAKKLAELHEASKGYDPPENSKLKSDLGRWTYLMEKRGKALEKMRGMARKKNLKK DFDIIYIKNVDFYKELAIRATKILNNSKYLSLCEEAEAEKVFCHHDYTYHNIIIGDDNEVYIIDFDYCKREIRTYDIANF MKKVLKRVDWNIEYAEAIIDAYNTVSPLREEEYEVLYAYLLFPQRYWRLANRYYYNEVMWGQNIFINKINNIINEKESYM KFIEEFKSKYNQVG >Mature_334_residues MMREFEIERQFDIKIEKLKPNKGVYYLKSNKGDRCLKRINYGTQKLLFVYGAKEHLAKNGFEHIDRYFLNIEDEPYALVN EDLYTLSNWIKGRECDFTNIEEVKLAAKKLAELHEASKGYDPPENSKLKSDLGRWTYLMEKRGKALEKMRGMARKKNLKK DFDIIYIKNVDFYKELAIRATKILNNSKYLSLCEEAEAEKVFCHHDYTYHNIIIGDDNEVYIIDFDYCKREIRTYDIANF MKKVLKRVDWNIEYAEAIIDAYNTVSPLREEEYEVLYAYLLFPQRYWRLANRYYYNEVMWGQNIFINKINNIINEKESYM KFIEEFKSKYNQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40203; Mature: 40203
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMREFEIERQFDIKIEKLKPNKGVYYLKSNKGDRCLKRINYGTQKLLFVYGAKEHLAKNG CCCCCCCCCEECEEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHHHCC FEHIDRYFLNIEDEPYALVNEDLYTLSNWIKGRECDFTNIEEVKLAAKKLAELHEASKGY HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPPENSKLKSDLGRWTYLMEKRGKALEKMRGMARKKNLKKDFDIIYIKNVDFYKELAIRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH TKILNNSKYLSLCEEAEAEKVFCHHDYTYHNIIIGDDNEVYIIDFDYCKREIRTYDIANF HHHHCCCHHHHHHHHCCCCEEEEECCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHH MKKVLKRVDWNIEYAEAIIDAYNTVSPLREEEYEVLYAYLLFPQRYWRLANRYYYNEVMW HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQNIFINKINNIINEKESYMKFIEEFKSKYNQVG CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMREFEIERQFDIKIEKLKPNKGVYYLKSNKGDRCLKRINYGTQKLLFVYGAKEHLAKNG CCCCCCCCCEECEEEEEECCCCCEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHHHCC FEHIDRYFLNIEDEPYALVNEDLYTLSNWIKGRECDFTNIEEVKLAAKKLAELHEASKGY HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPPENSKLKSDLGRWTYLMEKRGKALEKMRGMARKKNLKKDFDIIYIKNVDFYKELAIRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH TKILNNSKYLSLCEEAEAEKVFCHHDYTYHNIIIGDDNEVYIIDFDYCKREIRTYDIANF HHHHCCCHHHHHHHHCCCCEEEEECCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHH MKKVLKRVDWNIEYAEAIIDAYNTVSPLREEEYEVLYAYLLFPQRYWRLANRYYYNEVMW HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQNIFINKINNIINEKESYMKFIEEFKSKYNQVG CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]