Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cotS [H]

Identifier: 18311202

GI number: 18311202

Start: 2542452

End: 2543480

Strand: Reverse

Name: cotS [H]

Synonym: CPE2220

Alternate gene names: 18311202

Gene position: 2543480-2542452 (Counterclockwise)

Preceding gene: 18311203

Following gene: 18311200

Centisome position: 83.9

GC content: 22.84

Gene sequence:

>1029_bases
ATGAATAAGATTAGATATAAAGATGAGAAATATTTATGTAGATATGATTTAGATATTAAATTATTTGAAGCTTTAGGACT
AGATATATTTGATTTAAGACCAAATAGAAATGTATTTTTATTAGATACAAAGCAAGGTAAGAAGATTTTAAAGATGATAA
ATTATGATGATGACAGATTAAACTTCATAATCCATTCAACAGAGTACTTAAGGGAAAGATATGATGGTATATTAAAAATA
AATAAGCTTCCAAATGGAGAGTGGAGATTCAAATGGAAAGGAAATTATTATATATTATTAGATTACTTTGAAGGAACTGA
ATTTAATATAGCTAATCCAATCGAATTAGAAATAATAACAGATGCAGTAGCTAAACTTCATAATGCAGGAATGGGAATTC
AAGAGGCTACTTCAAAGGAAATGAATGAAAAAAATAGTGAGCTTTTTAAGTTAAAAGATTATTTTAAAAATAGTAAAAAA
GATTTAGAAAAACTAAAGGAAATAGTGGGAAGCTATAAGTATAAAAATGAATTTGATGAAATCTTTATAAAAGAAGTAGA
TTATCATTTAAGTGATGTAGAGAAGTGTATAGATTTATTAGAAAAGAGTAAATATGATGACTTATGTAGAGATAAAGAAA
AAATAACTTTATGCCATAATGATCTTGCCTATCATAATATATTATTTAATCAAAATAAGGTAAGCTTTATAGACTTTGAT
TATTGCAATATAAATTTAAGGGTAATAGACTTATGTAATTTTATAATTAAGAGTATAAAAAGATTTGGATTTAGTTTAGA
AATGTATGATTCTATTATAGAAAAGTATGATAAGTTAAACAACTTATCAAAGGAAGAAAAAGAGTTAATGTATATATATT
TAAGATTTCCTCATGATTTTTATACTGTTTCAATGCAATATTATTATAAATTAAAGGATTGGAAATATGAGTCCTTCTTA
AATAAATTAGAAAGGAAATTAGAATATACAAAGGAAAAGGAAATTTTATTAAATCATATAAATAACTAA

Upstream 100 bases:

>100_bases
GTATTTGCAAAATAATTATATAAAGGATTTAAAGATTAAAAGTAATGAATTAGAAGAATTATTACTTAAAGATTATCTTA
TATAGTAGGGGGAGAGGTTT

Downstream 100 bases:

>100_bases
TAAAACTAAGTAAAAGGTACCGTATAAAATAACTAATAAAACTTATAAATTGATTCTTAGAAGTAAGAAATTCTATTAAA
GTTTATAAGTTTTATGTTTA

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNKIRYKDEKYLCRYDLDIKLFEALGLDIFDLRPNRNVFLLDTKQGKKILKMINYDDDRLNFIIHSTEYLRERYDGILKI
NKLPNGEWRFKWKGNYYILLDYFEGTEFNIANPIELEIITDAVAKLHNAGMGIQEATSKEMNEKNSELFKLKDYFKNSKK
DLEKLKEIVGSYKYKNEFDEIFIKEVDYHLSDVEKCIDLLEKSKYDDLCRDKEKITLCHNDLAYHNILFNQNKVSFIDFD
YCNINLRVIDLCNFIIKSIKRFGFSLEMYDSIIEKYDKLNNLSKEEKELMYIYLRFPHDFYTVSMQYYYKLKDWKYESFL
NKLERKLEYTKEKEILLNHINN

Sequences:

>Translated_342_residues
MNKIRYKDEKYLCRYDLDIKLFEALGLDIFDLRPNRNVFLLDTKQGKKILKMINYDDDRLNFIIHSTEYLRERYDGILKI
NKLPNGEWRFKWKGNYYILLDYFEGTEFNIANPIELEIITDAVAKLHNAGMGIQEATSKEMNEKNSELFKLKDYFKNSKK
DLEKLKEIVGSYKYKNEFDEIFIKEVDYHLSDVEKCIDLLEKSKYDDLCRDKEKITLCHNDLAYHNILFNQNKVSFIDFD
YCNINLRVIDLCNFIIKSIKRFGFSLEMYDSIIEKYDKLNNLSKEEKELMYIYLRFPHDFYTVSMQYYYKLKDWKYESFL
NKLERKLEYTKEKEILLNHINN
>Mature_342_residues
MNKIRYKDEKYLCRYDLDIKLFEALGLDIFDLRPNRNVFLLDTKQGKKILKMINYDDDRLNFIIHSTEYLRERYDGILKI
NKLPNGEWRFKWKGNYYILLDYFEGTEFNIANPIELEIITDAVAKLHNAGMGIQEATSKEMNEKNSELFKLKDYFKNSKK
DLEKLKEIVGSYKYKNEFDEIFIKEVDYHLSDVEKCIDLLEKSKYDDLCRDKEKITLCHNDLAYHNILFNQNKVSFIDFD
YCNINLRVIDLCNFIIKSIKRFGFSLEMYDSIIEKYDKLNNLSKEEKELMYIYLRFPHDFYTVSMQYYYKLKDWKYESFL
NKLERKLEYTKEKEILLNHINN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 41516; Mature: 41516

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIRYKDEKYLCRYDLDIKLFEALGLDIFDLRPNRNVFLLDTKQGKKILKMINYDDDRL
CCCCCCCCCCEEEEECCCCHHHHHHCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCE
NFIIHSTEYLRERYDGILKINKLPNGEWRFKWKGNYYILLDYFEGTEFNIANPIELEIIT
EEEEECHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEHHH
DAVAKLHNAGMGIQEATSKEMNEKNSELFKLKDYFKNSKKDLEKLKEIVGSYKYKNEFDE
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCHHHH
IFIKEVDYHLSDVEKCIDLLEKSKYDDLCRDKEKITLCHNDLAYHNILFNQNKVSFIDFD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHHHHHEEECCCCEEEEEEE
YCNINLRVIDLCNFIIKSIKRFGFSLEMYDSIIEKYDKLNNLSKEEKELMYIYLRFPHDF
EEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCE
YTVSMQYYYKLKDWKYESFLNKLERKLEYTKEKEILLNHINN
EEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKIRYKDEKYLCRYDLDIKLFEALGLDIFDLRPNRNVFLLDTKQGKKILKMINYDDDRL
CCCCCCCCCCEEEEECCCCHHHHHHCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCE
NFIIHSTEYLRERYDGILKINKLPNGEWRFKWKGNYYILLDYFEGTEFNIANPIELEIIT
EEEEECHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEHHH
DAVAKLHNAGMGIQEATSKEMNEKNSELFKLKDYFKNSKKDLEKLKEIVGSYKYKNEFDE
HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCHHHH
IFIKEVDYHLSDVEKCIDLLEKSKYDDLCRDKEKITLCHNDLAYHNILFNQNKVSFIDFD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHHHHHEEECCCCEEEEEEE
YCNINLRVIDLCNFIIKSIKRFGFSLEMYDSIIEKYDKLNNLSKEEKELMYIYLRFPHDF
EEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCE
YTVSMQYYYKLKDWKYESFLNKLERKLEYTKEKEILLNHINN
EEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]