| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is veg [H]
Identifier: 18311198
GI number: 18311198
Start: 2538540
End: 2538776
Strand: Reverse
Name: veg [H]
Synonym: CPE2216
Alternate gene names: 18311198
Gene position: 2538776-2538540 (Counterclockwise)
Preceding gene: 18311199
Following gene: 18311197
Centisome position: 83.75
GC content: 33.33
Gene sequence:
>237_bases ATGAGTACCAGACTTACATTGAATTCCATCAGAAAAAGCATAGAAGATCACGTAGGTGAGAAAGTTAAGCTAAGAGCTAA TGGTGGAAGAAAAAAGATTTTGGAAAATGAAGGAATACTAGAAAGTGTTCACCCAAGTATTTTTGTAGTTAGATTACAAA AAGACACCCAAAGGAAAGTGACATACAGTTATTCAGATGTACTTACAAAAACGGTTCAACTAGATTTTGTTGGTTAA
Upstream 100 bases:
>100_bases ATTTTTGTTGACAAGACATGGACTTATATAGTAAAATTATTTATTTATTGAAAAAACATCCCCTTTAGTGTATAATGTAT AATAGAAAGAGGGTGTTAAA
Downstream 100 bases:
>100_bases ATAAAAAAGTTAGCTAATTAATTAGCTAACTTTTTTGTTTTATTTATTTAACAAAAAAAAGAAAGATGGTGGGTTTCCAT CTTTCAACTATGGTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSTRLTLNSIRKSIEDHVGEKVKLRANGGRKKILENEGILESVHPSIFVVRLQKDTQRKVTYSYSDVLTKTVQLDFVG
Sequences:
>Translated_78_residues MSTRLTLNSIRKSIEDHVGEKVKLRANGGRKKILENEGILESVHPSIFVVRLQKDTQRKVTYSYSDVLTKTVQLDFVG >Mature_77_residues STRLTLNSIRKSIEDHVGEKVKLRANGGRKKILENEGILESVHPSIFVVRLQKDTQRKVTYSYSDVLTKTVQLDFVG
Specific function: Unknown
COG id: COG4466
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009366 [H]
Pfam domain/function: PF06257 DUF1021 [H]
EC number: NA
Molecular weight: Translated: 8872; Mature: 8741
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRLTLNSIRKSIEDHVGEKVKLRANGGRKKILENEGILESVHPSIFVVRLQKDTQRKV CCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEE TYSYSDVLTKTVQLDFVG EECHHHHHHEEEEEEECC >Mature Secondary Structure STRLTLNSIRKSIEDHVGEKVKLRANGGRKKILENEGILESVHPSIFVVRLQKDTQRKV CCEEEHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEE TYSYSDVLTKTVQLDFVG EECHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 6181373 [H]